FFCP PHASE1:Mm9::chr3:40549390..40549420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18415 | |EntrezGene=18415 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P48722 | |UniProt=P48722 | ||
|association_with_transcript=38bp_to_ENSMUST00000077083_5end | |association_with_transcript=38bp_to_ENSMUST00000077083_5end | ||
|cluster_id=chr3:40549390..40549420,+ | |||
|description=CAGE_peak_2_at_Hspa4l_5end | |description=CAGE_peak_2_at_Hspa4l_5end | ||
|id=chr3:40549390..40549420,+ | |id=chr3:40549390..40549420,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.74e-16!63;UBERON:0004121!4.91e-16!102;UBERON:0000924!4.91e-16!102;UBERON:0006601!4.91e-16!102;UBERON:0002346!2.35e-14!71;UBERON:0003075!2.35e-14!71;UBERON:0007284!2.35e-14!71;UBERON:0000073!7.19e-14!75;UBERON:0001016!7.19e-14!75;UBERON:0001017!2.10e-13!73;UBERON:0005743!2.10e-13!73;UBERON:0001049!3.97e-13!52;UBERON:0005068!3.97e-13!52;UBERON:0006241!3.97e-13!52;UBERON:0007135!3.97e-13!52;UBERON:0007811!1.11e-12!86;UBERON:0000955!1.19e-12!50;UBERON:0006238!1.19e-12!50;UBERON:0003056!2.36e-12!49;UBERON:0002616!3.81e-12!49;UBERON:0000483!5.00e-09!181;UBERON:0003080!5.53e-09!40;UBERON:0002020!1.04e-08!34;UBERON:0000153!1.73e-08!94;UBERON:0002780!1.89e-08!39;UBERON:0001890!1.89e-08!39;UBERON:0006240!1.89e-08!39;UBERON:0000119!3.33e-08!183;UBERON:0004111!3.82e-08!122;UBERON:0000025!4.78e-08!114;UBERON:0002791!9.77e-07!29;UBERON:0003528!9.77e-07!29;UBERON:0001893!9.77e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.43e-20,92;UBERON:0004121,7.65e-18,95;UBERON:0000924,7.65e-18,95;UBERON:0006601,7.65e-18,95;UBERON:0010371,7.40e-17,73;UBERON:0002346,1.33e-16,64;UBERON:0003075,1.33e-16,64;UBERON:0007284,1.33e-16,64;UBERON:0000073,2.02e-14,54;UBERON:0001016,5.21e-14,75;UBERON:0001017,1.53e-13,73;UBERON:0001049,3.27e-13,52;UBERON:0005068,3.27e-13,52;UBERON:0006241,3.27e-13,52;UBERON:0007135,3.27e-13,52;UBERON:0003056,2.28e-12,49;UBERON:0000955,5.40e-11,47;UBERON:0006238,5.40e-11,47;UBERON:0002616,1.66e-10,46;UBERON:0000483,1.05e-09,174;UBERON:0003080,5.41e-09,40;UBERON:0000119,7.17e-09,176;UBERON:0002020,1.02e-08,34;UBERON:0002780,1.86e-08,39;UBERON:0001890,1.86e-08,39;UBERON:0006240,1.86e-08,39;UBERON:0004111,4.16e-08,122;UBERON:0000025,5.21e-08,114;UBERON:0003528,9.62e-07,29;UBERON:0002791,9.62e-07,29;UBERON:0001893,9.62e-07,29 | |||
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| ||
|short_description=p2@Hspa4l | |short_description=p2@Hspa4l | ||
}} | }} |
Latest revision as of 00:06, 2 October 2015
Short description: | p2@Hspa4l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hspa4l_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 38bp_to_ENSMUST00000077083_5end |
EntrezGene: | Hspa4l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.43e-20 | 92 |
ectoderm-derived structure | 7.65e-18 | 95 |
ectoderm | 7.65e-18 | 95 |
presumptive ectoderm | 7.65e-18 | 95 |
ecto-epithelium | 7.40e-17 | 73 |
neurectoderm | 1.33e-16 | 64 |
neural plate | 1.33e-16 | 64 |
presumptive neural plate | 1.33e-16 | 64 |
regional part of nervous system | 2.02e-14 | 54 |
nervous system | 5.21e-14 | 75 |
central nervous system | 1.53e-13 | 73 |
neural tube | 3.27e-13 | 52 |
neural rod | 3.27e-13 | 52 |
future spinal cord | 3.27e-13 | 52 |
neural keel | 3.27e-13 | 52 |
pre-chordal neural plate | 2.28e-12 | 49 |
brain | 5.40e-11 | 47 |
future brain | 5.40e-11 | 47 |
regional part of brain | 1.66e-10 | 46 |
epithelium | 1.05e-09 | 174 |
anterior neural tube | 5.41e-09 | 40 |
cell layer | 7.17e-09 | 176 |
gray matter | 1.02e-08 | 34 |
regional part of forebrain | 1.86e-08 | 39 |
forebrain | 1.86e-08 | 39 |
future forebrain | 1.86e-08 | 39 |
anatomical conduit | 4.16e-08 | 122 |
tube | 5.21e-08 | 114 |
brain grey matter | 9.62e-07 | 29 |
regional part of telencephalon | 9.62e-07 | 29 |
telencephalon | 9.62e-07 | 29 |