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FFCP PHASE1:Mm9::chr13:42804851..42804907,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=218194
|EntrezGene=218194
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q2M3X8
|UniProt=Q2M3X8
|association_with_transcript=-4bp_to_ENSMUST00000066928_5end
|association_with_transcript=-4bp_to_ENSMUST00000066928_5end
|cluster_id=chr13:42804851..42804907,+
|description=CAGE_peak_5_at_Phactr1_5end
|description=CAGE_peak_5_at_Phactr1_5end
|id=chr13:42804851..42804907,+
|id=chr13:42804851..42804907,+
|ontology_enrichment_celltype=CL:0000117!4.81e-19!23;CL:0000337!4.81e-19!23;CL:0000540!6.19e-17!33;CL:0000047!6.19e-17!33;CL:0000031!6.19e-17!33;CL:0000404!6.19e-17!33;CL:0000393!2.76e-12!39;CL:0000211!2.76e-12!39;CL:0000221!5.92e-12!44;CL:0000133!5.92e-12!44;CL:0002319!1.05e-11!43;CL:0000055!2.51e-08!50
|ontology_enrichment_celltype=CL:0000117!4.81e-19!23;CL:0000337!4.81e-19!23;CL:0000540!6.19e-17!33;CL:0000047!6.19e-17!33;CL:0000031!6.19e-17!33;CL:0000404!6.19e-17!33;CL:0000393!2.76e-12!39;CL:0000211!2.76e-12!39;CL:0000221!5.92e-12!44;CL:0000133!5.92e-12!44;CL:0002319!1.05e-11!43;CL:0000055!2.51e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-29,23;CL:0000337,1.33e-29,23;CL:0000540,9.54e-20,33;CL:0000047,9.54e-20,33;CL:0000031,9.54e-20,33;CL:0000404,9.54e-20,33;CL:0000393,1.80e-15,39;CL:0000211,1.80e-15,39;CL:0002319,2.64e-13,43;CL:0000221,7.91e-13,44;CL:0000133,7.91e-13,44;CL:0002609,6.35e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.93e-33!71;UBERON:0003075!9.93e-33!71;UBERON:0007284!9.93e-33!71;UBERON:0001017!7.02e-30!73;UBERON:0005743!7.02e-30!73;UBERON:0000073!7.55e-30!75;UBERON:0001016!7.55e-30!75;UBERON:0000033!3.49e-29!63;UBERON:0004121!5.15e-29!102;UBERON:0000924!5.15e-29!102;UBERON:0006601!5.15e-29!102;UBERON:0001049!5.47e-28!52;UBERON:0005068!5.47e-28!52;UBERON:0006241!5.47e-28!52;UBERON:0007135!5.47e-28!52;UBERON:0000955!3.92e-26!50;UBERON:0006238!3.92e-26!50;UBERON:0003056!8.65e-26!49;UBERON:0002616!2.03e-25!49;UBERON:0003080!2.09e-21!40;UBERON:0002020!5.72e-21!34;UBERON:0002780!1.50e-20!39;UBERON:0001890!1.50e-20!39;UBERON:0006240!1.50e-20!39;UBERON:0002791!1.05e-16!29;UBERON:0003528!1.05e-16!29;UBERON:0001893!1.05e-16!29;UBERON:0007811!6.24e-15!86;UBERON:0000153!2.62e-12!94;UBERON:0000956!3.32e-11!21;UBERON:0001869!3.32e-11!21;UBERON:0000203!3.32e-11!21;UBERON:0002619!1.48e-08!17;UBERON:0003076!4.82e-07!12;UBERON:0003057!4.82e-07!12;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8
|ontology_enrichment_uberon=UBERON:0002346!9.93e-33!71;UBERON:0003075!9.93e-33!71;UBERON:0007284!9.93e-33!71;UBERON:0001017!7.02e-30!73;UBERON:0005743!7.02e-30!73;UBERON:0000073!7.55e-30!75;UBERON:0001016!7.55e-30!75;UBERON:0000033!3.49e-29!63;UBERON:0004121!5.15e-29!102;UBERON:0000924!5.15e-29!102;UBERON:0006601!5.15e-29!102;UBERON:0001049!5.47e-28!52;UBERON:0005068!5.47e-28!52;UBERON:0006241!5.47e-28!52;UBERON:0007135!5.47e-28!52;UBERON:0000955!3.92e-26!50;UBERON:0006238!3.92e-26!50;UBERON:0003056!8.65e-26!49;UBERON:0002616!2.03e-25!49;UBERON:0003080!2.09e-21!40;UBERON:0002020!5.72e-21!34;UBERON:0002780!1.50e-20!39;UBERON:0001890!1.50e-20!39;UBERON:0006240!1.50e-20!39;UBERON:0002791!1.05e-16!29;UBERON:0003528!1.05e-16!29;UBERON:0001893!1.05e-16!29;UBERON:0007811!6.24e-15!86;UBERON:0000153!2.62e-12!94;UBERON:0000956!3.32e-11!21;UBERON:0001869!3.32e-11!21;UBERON:0000203!3.32e-11!21;UBERON:0002619!1.48e-08!17;UBERON:0003076!4.82e-07!12;UBERON:0003057!4.82e-07!12;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.69e-35,64;UBERON:0003075,2.69e-35,64;UBERON:0007284,2.69e-35,64;UBERON:0000073,3.43e-35,54;UBERON:0001049,2.56e-32,52;UBERON:0005068,2.56e-32,52;UBERON:0006241,2.56e-32,52;UBERON:0007135,2.56e-32,52;UBERON:0001017,4.86e-32,73;UBERON:0001016,8.72e-31,75;UBERON:0010371,3.81e-29,73;UBERON:0004121,4.23e-29,95;UBERON:0000924,4.23e-29,95;UBERON:0006601,4.23e-29,95;UBERON:0002020,4.41e-29,34;UBERON:0000955,1.01e-25,47;UBERON:0006238,1.01e-25,47;UBERON:0003056,4.32e-25,49;UBERON:0002616,1.06e-24,46;UBERON:0003528,1.99e-22,29;UBERON:0002791,1.99e-22,29;UBERON:0001893,1.99e-22,29;UBERON:0003080,1.25e-21,40;UBERON:0010314,3.17e-21,92;UBERON:0002780,2.01e-20,39;UBERON:0001890,2.01e-20,39;UBERON:0006240,2.01e-20,39;UBERON:0000956,3.94e-15,21;UBERON:0001869,3.94e-15,21;UBERON:0000203,3.94e-15,21;UBERON:0003076,3.50e-11,12;UBERON:0003057,3.50e-11,12;UBERON:0002619,5.19e-11,17;UBERON:0002240,3.14e-09,6;UBERON:0005174,3.14e-09,6;UBERON:0001137,3.14e-09,6;UBERON:0002420,1.64e-08,8;UBERON:0007245,1.64e-08,8;UBERON:0010009,1.64e-08,8;UBERON:0010011,1.64e-08,8;UBERON:0000454,1.64e-08,8;UBERON:0000025,3.22e-08,114;UBERON:0001948,4.30e-08,5;UBERON:0002315,4.30e-08,5;UBERON:0002021,6.35e-08,10;UBERON:0000411,6.35e-08,10;UBERON:0001950,6.35e-08,10;UBERON:0004111,5.49e-07,122
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,5.46254444320914,9.52183762689659,8.23980824558033,0,0,0,0,0,0,0,7.67303131082735,6.61529097825284,7.15104868594699,11.9973413449598,9.718215801871,6.00204916153275,7.3801012684042,3.67687514644008,8.8092704799511,15.0671058940522,14.8998337258556,9.10015385338338,13.4486836095542,11.9810075228055,9.49222196604695,3.93933827022176,8.40390362772456,10.606629077052,13.9524247183121,10.0655700745662,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.41106448562846,0,0,0,0,0,0,0,0,14.0534782565543,12.5668024088073,0,0,0,0,11.833460512981,0.457500602818626,9.29842205635197,4.69325664519146,1.79000820131231,6.2336413367868,2.92034273521964,0,0,0,3.36706969418358,0.260240885925407,0.229902104433473,0.720248519221397,1.9591626318643,2.85753296435577,3.33095672740609,7.30873451565885,6.20888089773638,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,9.46722433889417,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0,0.144649058581512,0,0,0,0,5.29816946959713,7.03270119553219,0,0,0,0.780877488593277,1.50796378412959,0,0.668396022247182,0.283076530788832,0,0.584511715822624,0.790575555893047,5.14114106274891,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.643011105094777,0.709360934569094,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,0,1.12950368523413,2.30162618253588,0.572895513439397,5.499301834998,2.05524755931193,1.5107877947794,4.05013500139084,2.2516060161211,3.62513927187364,3.62432218226274,1.03787347584177,0,0.682934423016537,2.18796045361465,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.50695859978048,1.13175804831646,1.03005658216871,1.21647789569252,1.78049953762401,0.476293691283074,1.15884325944855,1.54327376370964,1.64834360321323,0.588795680537589,0.342869252385415,0.70990322463735,1.66905332963125,1.0174249164263,0.846984423737976,1.69229215783353,0.914639864363863,0.263069711437843,1.49384525230448,0,1.54225523561426,1.28055827088233,0,1.08455788830176,2.89359916471712,2.99772693525535,1.16965804222704,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,5.46254444320914,9.52183762689659,8.23980824558033,0,0,0,0,0,0,0,7.67303131082735,6.61529097825284,7.15104868594699,11.9973413449598,9.718215801871,6.00204916153275,7.3801012684042,3.67687514644008,8.8092704799511,15.0671058940522,14.8998337258556,9.10015385338338,13.4486836095542,11.9810075228055,9.49222196604695,3.93933827022176,8.40390362772456,10.606629077052,13.9524247183121,10.0655700745662,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.41106448562846,0,0,0,0,0,0,0,0,14.0534782565543,12.5668024088073,0,0,0,0,11.833460512981,0.457500602818626,9.29842205635197,4.69325664519146,1.79000820131231,6.2336413367868,2.92034273521964,0,0,0,3.36706969418358,0.260240885925407,0.229902104433473,0.720248519221397,1.9591626318643,2.85753296435577,3.33095672740609,7.30873451565885,6.20888089773638,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,9.46722433889417,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0,0.144649058581512,0,0,0,0,5.29816946959713,7.03270119553219,0,0,0,0.780877488593277,1.50796378412959,0,0.668396022247182,0.283076530788832,0,0.584511715822624,0.790575555893047,5.14114106274891,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.643011105094777,0.709360934569094,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,0,1.12950368523413,2.30162618253588,0.572895513439397,5.499301834998,2.05524755931193,1.5107877947794,4.05013500139084,2.2516060161211,3.62513927187364,3.62432218226274,1.03787347584177,0,0.682934423016537,2.18796045361465,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.50695859978048,1.13175804831646,1.03005658216871,1.21647789569252,1.78049953762401,0.476293691283074,1.15884325944855,1.54327376370964,1.64834360321323,0.588795680537589,0.342869252385415,0.70990322463735,1.66905332963125,1.0174249164263,0.846984423737976,1.69229215783353,0.914639864363863,0.263069711437843,1.49384525230448,0,1.54225523561426,1.28055827088233,0,1.08455788830176,2.89359916471712,2.99772693525535,1.16965804222704,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p5@Phactr1
|short_description=p5@Phactr1
}}
}}

Latest revision as of 15:05, 1 October 2015

Short description:p5@Phactr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Phactr1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -4bp_to_ENSMUST00000066928_5end
EntrezGene:Phactr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Phactr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.45
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.83
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F19.30
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G19.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.69e-3564
neural plate2.69e-3564
presumptive neural plate2.69e-3564
regional part of nervous system3.43e-3554
neural tube2.56e-3252
neural rod2.56e-3252
future spinal cord2.56e-3252
neural keel2.56e-3252
central nervous system4.86e-3273
nervous system8.72e-3175
ecto-epithelium3.81e-2973
ectoderm-derived structure4.23e-2995
ectoderm4.23e-2995
presumptive ectoderm4.23e-2995
gray matter4.41e-2934
brain1.01e-2547
future brain1.01e-2547
pre-chordal neural plate4.32e-2549
regional part of brain1.06e-2446
brain grey matter1.99e-2229
regional part of telencephalon1.99e-2229
telencephalon1.99e-2229
anterior neural tube1.25e-2140
structure with developmental contribution from neural crest3.17e-2192
regional part of forebrain2.01e-2039
forebrain2.01e-2039
future forebrain2.01e-2039
cerebral cortex3.94e-1521
cerebral hemisphere3.94e-1521
pallium3.94e-1521
posterior neural tube3.50e-1112
chordal neural plate3.50e-1112
regional part of cerebral cortex5.19e-1117
spinal cord3.14e-096
dorsal region element3.14e-096
dorsum3.14e-096
basal ganglion1.64e-088
nuclear complex of neuraxis1.64e-088
aggregate regional part of brain1.64e-088
collection of basal ganglia1.64e-088
cerebral subcortex1.64e-088
tube3.22e-08114
regional part of spinal cord4.30e-085
gray matter of spinal cord4.30e-085
occipital lobe6.35e-0810
visual cortex6.35e-0810
neocortex6.35e-0810
anatomical conduit5.49e-07122
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