FFCP PHASE1:Mm9::chr4:55543810..55543828,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3478 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:55543810..55543828,- | |||
|description=CAGE_peak_at_chr4:55543810..55543828,- | |description=CAGE_peak_at_chr4:55543810..55543828,- | ||
|id=chr4:55543810..55543828,- | |id=chr4:55543810..55543828,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.30e-07,3;CL:0000359,4.30e-07,3;CL:0002539,4.30e-07,3;CL:0000514,4.30e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.85e-11,47;UBERON:0001155,3.90e-11,2;UBERON:0000059,3.90e-11,2;UBERON:0000160,1.69e-09,31;UBERON:0001135,4.30e-07,3;UBERON:0004237,4.30e-07,3;UBERON:0004695,4.30e-07,3;UBERON:0002111,4.30e-07,3;UBERON:0004178,4.30e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.45881856213434,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.01376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0.220841518460394,0,3.72783522436244,0,0,2.04365644166873,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.43839146485515,0.278047249225598,1.0447564995665,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0,2.97376904685418,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0,1.16978452271472,6.29173586057955,2.37751854862164,1.1948476395262,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.65954501176592,5.9741837877485,0.301564624640779,1.07435109602823,0.328281799490123,2.33184669303881,0,0.341741761595705,0,0,0,0,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,0.203319467126849,0,0.627264888043406,0.436725127492355,0.134864346384821,0.991841468704031,1.57053565190418,2.85152941241944,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.750729901804728,2.19781949120718,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0.859484216193193,0.765153328275374,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.45881856213434,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.01376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0.220841518460394,0,3.72783522436244,0,0,2.04365644166873,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.43839146485515,0.278047249225598,1.0447564995665,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0,2.97376904685418,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0,1.16978452271472,6.29173586057955,2.37751854862164,1.1948476395262,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.65954501176592,5.9741837877485,0.301564624640779,1.07435109602823,0.328281799490123,2.33184669303881,0,0.341741761595705,0,0,0,0,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,0.203319467126849,0,0.627264888043406,0.436725127492355,0.134864346384821,0.991841468704031,1.57053565190418,2.85152941241944,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.750729901804728,2.19781949120718,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0.859484216193193,0.765153328275374,0.441182838239031,0 | ||
|short_description=p@chr4:55543810..55543828,- | |short_description=p@chr4:55543810..55543828,- | ||
}} | }} |
Latest revision as of 14:41, 5 August 2015
Short description: | p@chr4:55543810..55543828, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:55543810..55543828, - |
Coexpression cluster: | MCL_coexpression_mm9:3478 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.30e-07 | 3 |
vascular associated smooth muscle cell | 4.30e-07 | 3 |
aortic smooth muscle cell | 4.30e-07 | 3 |
smooth muscle myoblast | 4.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.85e-11 | 47 |
colon | 3.90e-11 | 2 |
large intestine | 3.90e-11 | 2 |
intestine | 1.69e-09 | 31 |
smooth muscle tissue | 4.30e-07 | 3 |
blood vessel smooth muscle | 4.30e-07 | 3 |
arterial system smooth muscle | 4.30e-07 | 3 |
artery smooth muscle tissue | 4.30e-07 | 3 |
aorta smooth muscle tissue | 4.30e-07 | 3 |