FFCP PHASE1:Mm9::chr5:134575637..134575667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80909 | |EntrezGene=80909 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CAB8 | |UniProt=Q8CAB8 | ||
|association_with_transcript=19bp_to_NM_030719,uc008zva.1_5end | |association_with_transcript=19bp_to_NM_030719,uc008zva.1_5end | ||
|cluster_id=chr5:134575637..134575667,+ | |||
|description=CAGE_peak_2_at_Gatsl2_5end | |description=CAGE_peak_2_at_Gatsl2_5end | ||
|id=chr5:134575637..134575667,+ | |id=chr5:134575637..134575667,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.99e-08!23;CL:0000337!1.99e-08!23;CL:0002319!8.09e-08!43;CL:0000221!1.59e-07!44;CL:0000133!1.59e-07!44;CL:0000540!2.28e-07!33;CL:0000047!2.28e-07!33;CL:0000031!2.28e-07!33;CL:0000404!2.28e-07!33;CL:0000055!7.26e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.99e-08!23;CL:0000337!1.99e-08!23;CL:0002319!8.09e-08!43;CL:0000221!1.59e-07!44;CL:0000133!1.59e-07!44;CL:0000540!2.28e-07!33;CL:0000047!2.28e-07!33;CL:0000031!2.28e-07!33;CL:0000404!2.28e-07!33;CL:0000055!7.26e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-08,23;CL:0000337,1.53e-08,23;CL:0002319,8.27e-08,43;CL:0000221,1.63e-07,44;CL:0000133,1.63e-07,44;CL:0000540,1.82e-07,33;CL:0000047,1.82e-07,33;CL:0000031,1.82e-07,33;CL:0000404,1.82e-07,33;CL:0000393,9.13e-07,39;CL:0000211,9.13e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.92e-17!73;UBERON:0005743!9.92e-17!73;UBERON:0000073!7.91e-16!75;UBERON:0001016!7.91e-16!75;UBERON:0000955!1.22e-14!50;UBERON:0006238!1.22e-14!50;UBERON:0002616!5.28e-14!49;UBERON:0000033!1.42e-13!63;UBERON:0001049!1.84e-13!52;UBERON:0005068!1.84e-13!52;UBERON:0006241!1.84e-13!52;UBERON:0007135!1.84e-13!52;UBERON:0004121!1.51e-12!102;UBERON:0000924!1.51e-12!102;UBERON:0006601!1.51e-12!102;UBERON:0003080!2.65e-11!40;UBERON:0002020!2.89e-11!34;UBERON:0002346!3.55e-11!71;UBERON:0003075!3.55e-11!71;UBERON:0007284!3.55e-11!71;UBERON:0003056!6.91e-11!49;UBERON:0002780!7.15e-11!39;UBERON:0001890!7.15e-11!39;UBERON:0006240!7.15e-11!39;UBERON:0002791!9.52e-11!29;UBERON:0003528!9.52e-11!29;UBERON:0001893!9.52e-11!29;UBERON:0000956!2.88e-08!21;UBERON:0001869!2.88e-08!21;UBERON:0000203!2.88e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.52e-17,73;UBERON:0001016,6.25e-16,75;UBERON:0000073,6.27e-15,54;UBERON:0004121,2.43e-14,95;UBERON:0000924,2.43e-14,95;UBERON:0006601,2.43e-14,95;UBERON:0001049,1.16e-13,52;UBERON:0005068,1.16e-13,52;UBERON:0006241,1.16e-13,52;UBERON:0007135,1.16e-13,52;UBERON:0000955,2.29e-13,47;UBERON:0006238,2.29e-13,47;UBERON:0002346,2.62e-13,64;UBERON:0003075,2.62e-13,64;UBERON:0007284,2.62e-13,64;UBERON:0002616,9.72e-13,46;UBERON:0003080,1.82e-11,40;UBERON:0002020,1.98e-11,34;UBERON:0010371,3.94e-11,73;UBERON:0003056,4.82e-11,49;UBERON:0002780,4.99e-11,39;UBERON:0001890,4.99e-11,39;UBERON:0006240,4.99e-11,39;UBERON:0003528,6.68e-11,29;UBERON:0002791,6.68e-11,29;UBERON:0001893,6.68e-11,29;UBERON:0010314,1.62e-08,92;UBERON:0000956,2.23e-08,21;UBERON:0001869,2.23e-08,21;UBERON:0000203,2.23e-08,21;UBERON:0002619,9.36e-07,17 | |||
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| ||
|short_description=p2@Gatsl2 | |short_description=p2@Gatsl2 | ||
}} | }} |
Latest revision as of 23:30, 1 October 2015
Short description: | p2@Gatsl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gatsl2_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_NM_030719, uc008zva.1_5end |
EntrezGene: | Gatsl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.53e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.53e-08 | 23 |
neural cell | 8.27e-08 | 43 |
ectodermal cell | 1.63e-07 | 44 |
neurectodermal cell | 1.63e-07 | 44 |
neuron | 1.82e-07 | 33 |
neuronal stem cell | 1.82e-07 | 33 |
neuroblast | 1.82e-07 | 33 |
electrically signaling cell | 1.82e-07 | 33 |
electrically responsive cell | 9.13e-07 | 39 |
electrically active cell | 9.13e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.52e-17 | 73 |
nervous system | 6.25e-16 | 75 |
regional part of nervous system | 6.27e-15 | 54 |
ectoderm-derived structure | 2.43e-14 | 95 |
ectoderm | 2.43e-14 | 95 |
presumptive ectoderm | 2.43e-14 | 95 |
neural tube | 1.16e-13 | 52 |
neural rod | 1.16e-13 | 52 |
future spinal cord | 1.16e-13 | 52 |
neural keel | 1.16e-13 | 52 |
brain | 2.29e-13 | 47 |
future brain | 2.29e-13 | 47 |
neurectoderm | 2.62e-13 | 64 |
neural plate | 2.62e-13 | 64 |
presumptive neural plate | 2.62e-13 | 64 |
regional part of brain | 9.72e-13 | 46 |
anterior neural tube | 1.82e-11 | 40 |
gray matter | 1.98e-11 | 34 |
ecto-epithelium | 3.94e-11 | 73 |
pre-chordal neural plate | 4.82e-11 | 49 |
regional part of forebrain | 4.99e-11 | 39 |
forebrain | 4.99e-11 | 39 |
future forebrain | 4.99e-11 | 39 |
brain grey matter | 6.68e-11 | 29 |
regional part of telencephalon | 6.68e-11 | 29 |
telencephalon | 6.68e-11 | 29 |
structure with developmental contribution from neural crest | 1.62e-08 | 92 |
cerebral cortex | 2.23e-08 | 21 |
cerebral hemisphere | 2.23e-08 | 21 |
pallium | 2.23e-08 | 21 |
regional part of cerebral cortex | 9.36e-07 | 17 |