FFCP PHASE1:Mm9::chr15:78259055..78259066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72844 | |EntrezGene=72844 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1683 | |||
|TSSclassifier=NA | |||
|UniProt=E0CYQ0,A6H697,E0CYD2 | |UniProt=E0CYQ0,A6H697,E0CYD2 | ||
|association_with_transcript=0bp_to_ENSMUST00000089414,NM_001081367,uc007wpg.1,uc007wph.1,uc011zvs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000089414,NM_001081367,uc007wpg.1,uc007wph.1,uc011zvs.1_5end | ||
|cluster_id=chr15:78259055..78259066,+ | |||
|description=CAGE_peak_2_at_Kctd17_5end | |description=CAGE_peak_2_at_Kctd17_5end | ||
|id=chr15:78259055..78259066,+ | |id=chr15:78259055..78259066,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.16e-18!50;CL:0002319!1.50e-17!43;CL:0000221!1.70e-17!44;CL:0000133!1.70e-17!44;CL:0000393!4.59e-14!39;CL:0000211!4.59e-14!39;CL:0000540!1.64e-12!33;CL:0000047!1.64e-12!33;CL:0000031!1.64e-12!33;CL:0000404!1.64e-12!33;CL:0000117!4.60e-12!23;CL:0000337!4.60e-12!23;CL:0002321!8.76e-08!70;CL:0000220!8.76e-08!70 | |ontology_enrichment_celltype=CL:0000055!2.16e-18!50;CL:0002319!1.50e-17!43;CL:0000221!1.70e-17!44;CL:0000133!1.70e-17!44;CL:0000393!4.59e-14!39;CL:0000211!4.59e-14!39;CL:0000540!1.64e-12!33;CL:0000047!1.64e-12!33;CL:0000031!1.64e-12!33;CL:0000404!1.64e-12!33;CL:0000117!4.60e-12!23;CL:0000337!4.60e-12!23;CL:0002321!8.76e-08!70;CL:0000220!8.76e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.89e-18,43;CL:0000221,8.96e-18,44;CL:0000133,8.96e-18,44;CL:0000393,2.77e-14,39;CL:0000211,2.77e-14,39;CL:0000540,1.05e-12,33;CL:0000047,1.05e-12,33;CL:0000031,1.05e-12,33;CL:0000404,1.05e-12,33;CL:0000117,3.02e-12,23;CL:0000337,3.02e-12,23;CL:0002321,1.08e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.37e-32!75;UBERON:0001016!2.37e-32!75;UBERON:0001017!3.25e-32!73;UBERON:0005743!3.25e-32!73;UBERON:0004121!8.32e-28!102;UBERON:0000924!8.32e-28!102;UBERON:0006601!8.32e-28!102;UBERON:0001049!4.45e-24!52;UBERON:0005068!4.45e-24!52;UBERON:0006241!4.45e-24!52;UBERON:0007135!4.45e-24!52;UBERON:0000955!4.37e-23!50;UBERON:0006238!4.37e-23!50;UBERON:0002616!1.24e-22!49;UBERON:0002346!1.22e-21!71;UBERON:0003075!1.22e-21!71;UBERON:0007284!1.22e-21!71;UBERON:0000033!1.17e-20!63;UBERON:0002020!3.68e-19!34;UBERON:0003080!1.81e-18!40;UBERON:0002780!4.08e-18!39;UBERON:0001890!4.08e-18!39;UBERON:0006240!4.08e-18!39;UBERON:0002791!1.12e-16!29;UBERON:0003528!1.12e-16!29;UBERON:0001893!1.12e-16!29;UBERON:0003056!2.19e-16!49;UBERON:0000956!2.70e-12!21;UBERON:0001869!2.70e-12!21;UBERON:0000203!2.70e-12!21;UBERON:0002619!9.45e-11!17;UBERON:0000153!1.15e-09!94;UBERON:0007811!1.33e-09!86;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10;UBERON:0004111!2.03e-07!122;UBERON:0000025!2.55e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!2.37e-32!75;UBERON:0001016!2.37e-32!75;UBERON:0001017!3.25e-32!73;UBERON:0005743!3.25e-32!73;UBERON:0004121!8.32e-28!102;UBERON:0000924!8.32e-28!102;UBERON:0006601!8.32e-28!102;UBERON:0001049!4.45e-24!52;UBERON:0005068!4.45e-24!52;UBERON:0006241!4.45e-24!52;UBERON:0007135!4.45e-24!52;UBERON:0000955!4.37e-23!50;UBERON:0006238!4.37e-23!50;UBERON:0002616!1.24e-22!49;UBERON:0002346!1.22e-21!71;UBERON:0003075!1.22e-21!71;UBERON:0007284!1.22e-21!71;UBERON:0000033!1.17e-20!63;UBERON:0002020!3.68e-19!34;UBERON:0003080!1.81e-18!40;UBERON:0002780!4.08e-18!39;UBERON:0001890!4.08e-18!39;UBERON:0006240!4.08e-18!39;UBERON:0002791!1.12e-16!29;UBERON:0003528!1.12e-16!29;UBERON:0001893!1.12e-16!29;UBERON:0003056!2.19e-16!49;UBERON:0000956!2.70e-12!21;UBERON:0001869!2.70e-12!21;UBERON:0000203!2.70e-12!21;UBERON:0002619!9.45e-11!17;UBERON:0000153!1.15e-09!94;UBERON:0007811!1.33e-09!86;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10;UBERON:0004111!2.03e-07!122;UBERON:0000025!2.55e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.83e-33,75;UBERON:0001017,9.42e-33,73;UBERON:0004121,2.51e-28,95;UBERON:0000924,2.51e-28,95;UBERON:0006601,2.51e-28,95;UBERON:0000073,9.18e-26,54;UBERON:0001049,1.80e-24,52;UBERON:0005068,1.80e-24,52;UBERON:0006241,1.80e-24,52;UBERON:0007135,1.80e-24,52;UBERON:0002346,1.35e-22,64;UBERON:0003075,1.35e-22,64;UBERON:0007284,1.35e-22,64;UBERON:0000955,9.94e-22,47;UBERON:0006238,9.94e-22,47;UBERON:0002616,2.81e-21,46;UBERON:0002020,1.81e-19,34;UBERON:0010371,4.41e-19,73;UBERON:0003080,9.18e-19,40;UBERON:0002780,2.10e-18,39;UBERON:0001890,2.10e-18,39;UBERON:0006240,2.10e-18,39;UBERON:0003528,6.09e-17,29;UBERON:0002791,6.09e-17,29;UBERON:0001893,6.09e-17,29;UBERON:0003056,1.98e-16,49;UBERON:0010314,2.10e-15,92;UBERON:0000956,1.75e-12,21;UBERON:0001869,1.75e-12,21;UBERON:0000203,1.75e-12,21;UBERON:0002619,6.53e-11,17;UBERON:0002021,9.96e-08,10;UBERON:0000411,9.96e-08,10;UBERON:0001950,9.96e-08,10 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0.258246646883153,0,0,0.34243593645101,0.558405112967355,0,0,0.333109761815663,0.404950534779652,0,0,0,0,3.91199134694921,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,7.70464677268311,7.34187008646726,10.1710874765245,23.1106665763273,13.4008571468028,14.387812531497,11.0589273084036,24.4379359420452,0,0,0,10.0331180054019,4.87106847895886,3.09403255366465,9.1042407386819,14.2827564403449,12.0427966666174,12.876092218627,16.0073063300005,4.49949858640699,1.97773272513395,5.6838409195688,13.1824048628098,33.8112108682968,7.46565208621039,6.61529097825284,6.73039876324422,11.9973413449598,10.1599528837742,7.83941114975706,10.7346927540425,5.51531271966013,6.60695285996332,14.300981865541,11.5204899942183,8.83638127792299,12.6252948171325,10.4182674111352,11.1673199600552,12.9435400307286,10.3902808488231,10.3120004915784,8.68467252874528,8.38797506213853,2.72614295999463,5.59229544790213,1.73918693221007,0.860423876981386,0,0,0.649776417447669,0,1.26399978118577,10.0553890321054,6.23486411046885,10.2468476607999,3.23939865486365,3.84979432242953,5.09610479413291,14.2213340630666,1.08245520505607,0.760079596425296,1.01104889002957,1.25602267690966,1.55362730188303,3.11728492036132,2.94925055502431,3.34912026143355,2.99800146432876,3.01445281105245,1.76383060703557,3.14166478324189,12.1125534189843,2.60278842455841,1.76922110389975,2.10296904931632,0.662524555381181,0,1.86391761218122,4.9772735491963,5.23616767033638,0.766371165625774,0.359445373517761,1.79970819298022,0.254140454146129,6.14141621559773,14.1825186873774,11.4345460422707,10.4294592115366,8.95004100656157,9.14267396062064,12.0058534670141,4.58277137326423,2.36373244159177,3.0326731012041,0.841767423545896,3.90361328888111,2.29902104433473,3.24111833649629,3.31550599238573,4.28629944653366,2.3060469651273,3.37326208415024,1.29351685369508,2.58681591519411,1.89106080167819,3.69497360744293,3.72632745126877,2.50242524303038,4.52727816478817,3.49829631893504,4.17971960318836,0,1.02939162845886,0.284163499395593,1.03562886267751,1.64168241986767,1.80062061461015,1.18372367792605,0.983821158737019,1.54267112887378,0.930135779001631,1.87791380979733,0.700592054203017,1.15191894939436,1.14917224855367,1.21603214318784,1.46199987425332,2.41505126820156,1.47627060636409,9.04246778825747,8.54108282748061,0.330418782983798,0.264450566663544,3.19932375802851,3.71578674976702,2.83508414908605,2.62188582010345,2.66853652613844,1.71203063501303,2.84717436926707,1.81168850196412,2.5133520880027,1.59165177632921,2.33956904542944,1.79763881730844,1.94524244887225,0.796565093017469,3.60369011810855,3.08470984046268,1.1270773567308,2.64746726198909,3.68509725618489,3.71719845418688,3.22506339333712,1.32849133181642,3.767969468193,3.57851775373222,0.592905254174298,0.667380422864376,0,0.674586337154561,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.810676133875177,0.549122826376163,2.87536413054709,1.48856379067401,0.624075346229121,1.01031551178845,0.538192240565737,0.482443521363367,1.47802552133284,2.84237117655727,2.60743962307241,2.8856664581782,3.75504397261603,2.34508760418542,4.04674189506223,1.95133647857799,2.99506773801763,3.76489972402917,3.34855014180723,1.80249646187312,2.07221978239075,1.59113964439663,1.50791283939272,1.08781136763742,1.47529281905711,0.551873492609465,5.13761887960934,8.08760637486202,4.59017847054691,2.27223834483936,2.83957397474631,5.85658116444958,4.95473814785438,5.4962823529087,5.79276552614225,2.83076530788832,4.04810701674894,6.13737301613755,3.16230222357219,8.03303291054518,5.39372323791421,3.20518086601059,5.04949573996086,6.10389454998381,0,3.15614827001476,2.11626489875326,1.69744571780308,2.95301892880773,2.15204603560749,1.80899805217755,0.727067458955011,1.42598951353889,0.948110273807448,0,1.03135543248187,4.42571487479924,2.70091641046965,5.6917820864412,2.57204442037911,3.19212420556092,6.42127743367454,5.10101963866575,5.48036908406279,4.92810586933792,2.75381692122966,1.98475558249466,1.81374878235628,2.09903754704677,2.65376869683886,1.67121281604391,2.1338316966858,0.291480836629851,8.34413859047294,0.512612642393558,3.30218988741156,2.03713980106683,0.941842285023455,0.27338845544205,0.457556346413045,0,0.69975726161829,0.276399947608848,0.954670618015114,3.32152793260192,4.06638934253697,3.02414954301044,4.18176592028937,2.83871332870031,2.15782954215713,2.31429676030941,2.09404753587224,4.40690909192096,2.4853572523477,0,2.69129782879162,1.98550188548517,3.11121901350476,3.87479470433193,3.37912250981556,3.0512882047896,2.0832701575032,1.78260885523708,0.724752362478018,0.864090018773596,1.58005560314089,1.62180172232131,1.74608627180206,0.51968329191118,1.07416017400489,0.596044064343795,0.360586348559907,0.590758108698309,0.605798699688886,0.533447646584999,0.201652370273681,0.487289403698762,0.481059208201647,0.467507608726276,5.21479882314986,5.32766288097755,8.971385660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| ||
|short_description=p2@Kctd17 | |short_description=p2@Kctd17 | ||
}} | }} |
Latest revision as of 02:04, 27 September 2015
Short description: | p2@Kctd17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kctd17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1683 |
Association with transcript: | 0bp_to_ENSMUST00000089414, NM_001081367, uc007wpg.1, uc007wph.1, uc011zvs.1_5end |
EntrezGene: | Kctd17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.89e-18 | 43 |
ectodermal cell | 8.96e-18 | 44 |
neurectodermal cell | 8.96e-18 | 44 |
electrically responsive cell | 2.77e-14 | 39 |
electrically active cell | 2.77e-14 | 39 |
neuron | 1.05e-12 | 33 |
neuronal stem cell | 1.05e-12 | 33 |
neuroblast | 1.05e-12 | 33 |
electrically signaling cell | 1.05e-12 | 33 |
CNS neuron (sensu Vertebrata) | 3.02e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.02e-12 | 23 |
embryonic cell | 1.08e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.83e-33 | 75 |
central nervous system | 9.42e-33 | 73 |
ectoderm-derived structure | 2.51e-28 | 95 |
ectoderm | 2.51e-28 | 95 |
presumptive ectoderm | 2.51e-28 | 95 |
regional part of nervous system | 9.18e-26 | 54 |
neural tube | 1.80e-24 | 52 |
neural rod | 1.80e-24 | 52 |
future spinal cord | 1.80e-24 | 52 |
neural keel | 1.80e-24 | 52 |
neurectoderm | 1.35e-22 | 64 |
neural plate | 1.35e-22 | 64 |
presumptive neural plate | 1.35e-22 | 64 |
brain | 9.94e-22 | 47 |
future brain | 9.94e-22 | 47 |
regional part of brain | 2.81e-21 | 46 |
gray matter | 1.81e-19 | 34 |
ecto-epithelium | 4.41e-19 | 73 |
anterior neural tube | 9.18e-19 | 40 |
regional part of forebrain | 2.10e-18 | 39 |
forebrain | 2.10e-18 | 39 |
future forebrain | 2.10e-18 | 39 |
brain grey matter | 6.09e-17 | 29 |
regional part of telencephalon | 6.09e-17 | 29 |
telencephalon | 6.09e-17 | 29 |
pre-chordal neural plate | 1.98e-16 | 49 |
structure with developmental contribution from neural crest | 2.10e-15 | 92 |
cerebral cortex | 1.75e-12 | 21 |
cerebral hemisphere | 1.75e-12 | 21 |
pallium | 1.75e-12 | 21 |
regional part of cerebral cortex | 6.53e-11 | 17 |
occipital lobe | 9.96e-08 | 10 |
visual cortex | 9.96e-08 | 10 |
neocortex | 9.96e-08 | 10 |