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{{CL
{{CL
|id=CL:0002255
|alt_id=
|name=stromal cell of endometrium
|namespace=cell
|def="An epithelial cell that regulates growth and differentiation of the overlying epithelium." [GOC:tfm, PMID:11331626]
|xref=FMA:86490
|is_a=CL:0000499;;CL:0002149
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-08T09:50:04Z
|def="An epithelial cell that regulates growth and differentiation of the overlying epithelium." [GOC:tfm, PMID:11331626]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002255
|is_a=CL:0000499 ;;CL:0002149
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=stromal cell of endometrium
|namespace=FANTOM
|obo_creation_date=2010-09-08T09:50:04Z
|part_of=UBERON:0001295
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=FMA:86490
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:stromal cell of endometrium
Namespace:FANTOM
Definition:"An epithelial cell that regulates growth and differentiation of the overlying epithelium." [GOC:tfm, PMID:11331626]
Xrefs:
links:
FMA:86490
Created by:tmeehan
Creation date:2010-09-08T09:50:04Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000499(stromal cell),CL:0002149(epithelial cell of uterus)
part_of:UBERON:0001295(endometrium)



Children


derives from:FF:0101555 (endometrial cancer cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002255 (stromal cell of endometrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-66FFCP PHASE1:Hg19::chr2:22353663..22353666,+#_8f801785ced97fad41dc783122cc21b5p@chr2:22353663..22353666, +
2.83e-66FFCP PHASE2:Hg19::chr2:22353663..22353666,+#_8f801785ced97fad41dc783122cc21b5p@chr2:22353663..22353666, +
2.83e-66FFCP PHASE1:Hg19::chr20:30943898..30943899,-#_8f801785ced97fad41dc783122cc21b5p@chr20:30943898..30943899, -
2.83e-66FFCP PHASE1:Hg19::chr3:168726935..168726936,-#_8f801785ced97fad41dc783122cc21b5p@chr3:168726935..168726936, -
2.83e-66FFCP PHASE2:Hg19::chr3:168726935..168726936,-#_8f801785ced97fad41dc783122cc21b5p@chr3:168726935..168726936, -
2.83e-66FFCP PHASE1:Hg19::chr9:88496176..88496181,+#_8f801785ced97fad41dc783122cc21b5p@chr9:88496176..88496181, +
2.83e-66FFCP PHASE2:Hg19::chr9:88496176..88496181,+#_8f801785ced97fad41dc783122cc21b5p@chr9:88496176..88496181, +
2.83e-66FFCP PHASE2:Hg19::chr20:30943898..30943899,-#_8f801785ced97fad41dc783122cc21b5p@chr20:30943898..30943899, -
3.67e-66FFCP PHASE1:Hg19::chr7:150006580..150006590,+#_253801283d8baf00e920f3778d8839e4p6@LRRC61
3.67e-66FFCP PHASE2:Hg19::chr7:150006580..150006590,+#_253801283d8baf00e920f3778d8839e4p6@LRRC61
1.82e-59FFCP PHASE1:Hg19::chr11:13984141..13984144,+#_00f0dcda0211ac567ae2cc3093519392p6@SPON1
1.82e-59FFCP PHASE2:Hg19::chr11:13984141..13984144,+#_00f0dcda0211ac567ae2cc3093519392p6@SPON1
4.05e-53FFCP PHASE2:Hg19::chr2:113982581..113982590,-#_61ace8fd8f93bc9da3752cf64c70ed9bp@chr2:113982581..113982590, -
4.05e-53FFCP PHASE1:Hg19::chr2:113982581..113982590,-#_61ace8fd8f93bc9da3752cf64c70ed9bp@chr2:113982581..113982590, -
1.05e-49FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_38135ea662069d1b50f9acfbc1c96983p@chr6:75178505..75178516, +
1.05e-49FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_38135ea662069d1b50f9acfbc1c96983p@chr6:75178505..75178516, +
9.76e-45FFCP PHASE1:Hg19::chr6:42724431..42724435,+#_d75e0256121ae6cfa4a7439c7f77dc39p@chr6:42724431..42724435, +
9.76e-45FFCP PHASE1:Hg19::chr11:13974012..13974015,-#_d75e0256121ae6cfa4a7439c7f77dc39p@chr11:13974012..13974015, -
9.76e-45FFCP PHASE2:Hg19::chr6:42724431..42724435,+#_d75e0256121ae6cfa4a7439c7f77dc39p@chr6:42724431..42724435, +
9.76e-45FFCP PHASE2:Hg19::chr11:13974012..13974015,-#_d75e0256121ae6cfa4a7439c7f77dc39p@chr11:13974012..13974015, -
1.22e-44FFCP PHASE1:Hg19::chr8:101588316..101588317,-#_1fa40cadddd2c9e1a20203ada6d0c22bp1@AK127517
1.22e-44FFCP PHASE2:Hg19::chr8:101588316..101588317,-#_1fa40cadddd2c9e1a20203ada6d0c22bp1@AK127517
1.22e-44FFCP PHASE2:Hg19::chr17:37809300..37809309,+#_1fa40cadddd2c9e1a20203ada6d0c22bp13@STARD3
1.22e-44FFCP PHASE1:Hg19::chr17:37809300..37809309,+#_1fa40cadddd2c9e1a20203ada6d0c22bp13@STARD3
6.48e-43FFCP PHASE1:Hg19::chr11:16916978..16916996,-#_2c0ae580021a7481389b98046ca1c451p@chr11:16916978..16916996, -
6.48e-43FFCP PHASE2:Hg19::chr11:16916978..16916996,-#_2c0ae580021a7481389b98046ca1c451p@chr11:16916978..16916996, -
9.19e-38FFCP PHASE1:Hg19::chr4:19711103..19711108,+#_0c0017931017e83c4f49afe84eacc63bp@chr4:19711103..19711108, +
9.19e-38FFCP PHASE2:Hg19::chr4:19711103..19711108,+#_0c0017931017e83c4f49afe84eacc63bp@chr4:19711103..19711108, +
1.72e-37FFCP PHASE1:Hg19::chr5:8984611..8984621,-#_bdd8363c2639ac4719885227f6158d29p@chr5:8984611..8984621, -
1.72e-37FFCP PHASE2:Hg19::chr5:8984611..8984621,-#_bdd8363c2639ac4719885227f6158d29p@chr5:8984611..8984621, -
1.42e-36FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_4e330b2d0eb86f6010fe98db6b7309a2p8@PAX8
1.42e-36FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_4e330b2d0eb86f6010fe98db6b7309a2p8@PAX8
6.14e-36FFCP PHASE1:Hg19::chr13:23458336..23458347,+#_21657de7cf0a84ba1c3739b62262257dp@chr13:23458336..23458347, +
6.14e-36FFCP PHASE2:Hg19::chr13:23458336..23458347,+#_21657de7cf0a84ba1c3739b62262257dp@chr13:23458336..23458347, +
4.27e-34FFCP PHASE2:Hg19::chr12:79349337..79349347,-#_b8828d0e9beef469ca48f7b3476074cfp@chr12:79349337..79349347, -
4.27e-34FFCP PHASE2:Hg19::chr7:119683648..119683658,+#_b8828d0e9beef469ca48f7b3476074cfp@chr7:119683648..119683658, +
4.27e-34FFCP PHASE1:Hg19::chr6:31097301..31097322,+#_b8828d0e9beef469ca48f7b3476074cfp@chr6:31097301..31097322, +
4.27e-34FFCP PHASE2:Hg19::chr14:33147559..33147570,+#_b8828d0e9beef469ca48f7b3476074cfp@chr14:33147559..33147570, +
4.27e-34FFCP PHASE1:Hg19::chr1:81428697..81428704,-#_b8828d0e9beef469ca48f7b3476074cfp@chr1:81428697..81428704, -
4.27e-34FFCP PHASE2:Hg19::chr13:85397447..85397450,-#_b8828d0e9beef469ca48f7b3476074cfp@chr13:85397447..85397450, -
4.27e-34FFCP PHASE1:Hg19::chr11:61897578..61897585,+#_b8828d0e9beef469ca48f7b3476074cfp10@INCENP
4.27e-34FFCP PHASE2:Hg19::chr6:31097301..31097322,+#_b8828d0e9beef469ca48f7b3476074cfp@chr6:31097301..31097322, +
4.27e-34FFCP PHASE2:Hg19::chr19:28782435..28782439,+#_b8828d0e9beef469ca48f7b3476074cfp@chr19:28782435..28782439, +
4.27e-34FFCP PHASE2:Hg19::chr1:197927638..197927639,-#_b8828d0e9beef469ca48f7b3476074cfp@chr1:197927638..197927639, -
4.27e-34FFCP PHASE1:Hg19::chr4:95680548..95680553,-#_b8828d0e9beef469ca48f7b3476074cfp@chr4:95680548..95680553, -
4.27e-34FFCP PHASE2:Hg19::chr11:61897578..61897585,+#_b8828d0e9beef469ca48f7b3476074cfp10@INCENP
4.27e-34FFCP PHASE2:Hg19::chr4:95680548..95680553,-#_b8828d0e9beef469ca48f7b3476074cfp@chr4:95680548..95680553, -
4.27e-34FFCP PHASE1:Hg19::chr8:120220206..120220214,+#_b8828d0e9beef469ca48f7b3476074cfp23@MAL2
4.27e-34FFCP PHASE1:Hg19::chr19:28782435..28782439,+#_b8828d0e9beef469ca48f7b3476074cfp@chr19:28782435..28782439, +
4.27e-34FFCP PHASE2:Hg19::chr8:120220206..120220214,+#_b8828d0e9beef469ca48f7b3476074cfp23@MAL2
4.27e-34FFCP PHASE1:Hg19::chr1:197927638..197927639,-#_b8828d0e9beef469ca48f7b3476074cfp@chr1:197927638..197927639, -
4.27e-34FFCP PHASE1:Hg19::chr4:162584094..162584130,-#_b8828d0e9beef469ca48f7b3476074cfp@chr4:162584094..162584130, -
4.27e-34FFCP PHASE2:Hg19::chr4:162584094..162584130,-#_b8828d0e9beef469ca48f7b3476074cfp@chr4:162584094..162584130, -
4.27e-34FFCP PHASE1:Hg19::chr14:84320708..84320731,+#_b8828d0e9beef469ca48f7b3476074cfp@chr14:84320708..84320731, +
4.27e-34FFCP PHASE1:Hg19::chr4:95680517..95680526,-#_b8828d0e9beef469ca48f7b3476074cfp@chr4:95680517..95680526, -
4.27e-34FFCP PHASE2:Hg19::chr1:81428697..81428704,-#_b8828d0e9beef469ca48f7b3476074cfp@chr1:81428697..81428704, -
4.27e-34FFCP PHASE2:Hg19::chr14:84320708..84320731,+#_b8828d0e9beef469ca48f7b3476074cfp@chr14:84320708..84320731, +
4.27e-34FFCP PHASE2:Hg19::chr4:95680517..95680526,-#_b8828d0e9beef469ca48f7b3476074cfp@chr4:95680517..95680526, -
4.27e-34FFCP PHASE1:Hg19::chr7:6312923..6312932,-#_b8828d0e9beef469ca48f7b3476074cfp@chr7:6312923..6312932, -
4.27e-34FFCP PHASE1:Hg19::chr12:79349337..79349347,-#_b8828d0e9beef469ca48f7b3476074cfp@chr12:79349337..79349347, -
4.27e-34FFCP PHASE1:Hg19::chr14:33147559..33147570,+#_b8828d0e9beef469ca48f7b3476074cfp@chr14:33147559..33147570, +
4.27e-34FFCP PHASE2:Hg19::chr7:6312923..6312932,-#_b8828d0e9beef469ca48f7b3476074cfp@chr7:6312923..6312932, -
4.27e-34FFCP PHASE1:Hg19::chr13:85397447..85397450,-#_b8828d0e9beef469ca48f7b3476074cfp@chr13:85397447..85397450, -
4.27e-34FFCP PHASE1:Hg19::chr7:119683648..119683658,+#_b8828d0e9beef469ca48f7b3476074cfp@chr7:119683648..119683658, +
5.98e-34FFCP PHASE2:Hg19::chr1:159836049..159836056,+#_8715004d670c07d9c9ce46fcba8a113ap@chr1:159836049..159836056, +
5.98e-34FFCP PHASE1:Hg19::chr7:154497207..154497243,-#_8715004d670c07d9c9ce46fcba8a113ap@chr7:154497207..154497243, -
5.98e-34FFCP PHASE2:Hg19::chr7:154497207..154497243,-#_8715004d670c07d9c9ce46fcba8a113ap@chr7:154497207..154497243, -
5.98e-34FFCP PHASE1:Hg19::chr1:159836049..159836056,+#_8715004d670c07d9c9ce46fcba8a113ap@chr1:159836049..159836056, +
8.35e-34FFCP PHASE1:Hg19::chr2:220080970..220081009,-#_99afaf86a3be616965309a1895eb712cp16@ABCB6
8.35e-34FFCP PHASE2:Hg19::chr2:220080970..220081009,-#_99afaf86a3be616965309a1895eb712cp16@ABCB6
8.35e-34FFCP PHASE1:Hg19::chr4:19457174..19457178,+#_99afaf86a3be616965309a1895eb712cp3@ENST00000511431
8.35e-34FFCP PHASE2:Hg19::chr4:19457174..19457178,+#_99afaf86a3be616965309a1895eb712cp3@ENST00000511431
9.39e-34FFCP PHASE2:Hg19::chr22:28901919..28901924,+#_47abf1e2b99384ca0744bc5366bde79dp@chr22:28901919..28901924, +
9.39e-34FFCP PHASE1:Hg19::chr22:28901919..28901924,+#_47abf1e2b99384ca0744bc5366bde79dp@chr22:28901919..28901924, +
9.87e-34FFCP PHASE2:Hg19::chr6:161736275..161736279,-#_e83bfe8ee7c736c786e125c5bbc03baep@chr6:161736275..161736279, -
9.87e-34FFCP PHASE1:Hg19::chr6:161736275..161736279,-#_e83bfe8ee7c736c786e125c5bbc03baep@chr6:161736275..161736279, -
9.26e-30FFCP PHASE2:Hg19::chr2:113990903..113990907,-#_3887704c881ef1c1e9234f73d0f942c0p@chr2:113990903..113990907, -
9.26e-30FFCP PHASE1:Hg19::chr2:113990903..113990907,-#_3887704c881ef1c1e9234f73d0f942c0p@chr2:113990903..113990907, -
7.1e-28FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_903cec008be661709a121dff609e657ap@chr2:113981834..113981850, -
7.1e-28FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_903cec008be661709a121dff609e657ap@chr2:113981834..113981850, -
7.39e-28FFCP PHASE2:Hg19::chr1:206288186..206288203,-#_133d34d287d66f8833b8f59f64eee7c6p1@C1orf186
7.39e-28FFCP PHASE1:Hg19::chr1:206288186..206288203,-#_133d34d287d66f8833b8f59f64eee7c6p1@C1orf186
2.32e-27FFCP PHASE1:Hg19::chr2:113979656..113979676,-#_d08014c5b7b86371f837a1e125a7672dp@chr2:113979656..113979676, -
2.32e-27FFCP PHASE2:Hg19::chr2:113979656..113979676,-#_d08014c5b7b86371f837a1e125a7672dp@chr2:113979656..113979676, -
2.38e-27FFCP PHASE1:Hg19::chr11:12061317..12061323,-#_c3f098ff1ab9c551fe3324d7b60f1816p@chr11:12061317..12061323, -
2.38e-27FFCP PHASE2:Hg19::chr11:12061317..12061323,-#_c3f098ff1ab9c551fe3324d7b60f1816p@chr11:12061317..12061323, -
2.38e-27FFCP PHASE1:Hg19::chr12:113644361..113644365,+#_c3f098ff1ab9c551fe3324d7b60f1816p@chr12:113644361..113644365, +
2.38e-27FFCP PHASE2:Hg19::chr12:113644361..113644365,+#_c3f098ff1ab9c551fe3324d7b60f1816p@chr12:113644361..113644365, +
2.38e-27FFCP PHASE1:Hg19::chr11:74751521..74751532,+#_c3f098ff1ab9c551fe3324d7b60f1816p@chr11:74751521..74751532, +
2.38e-27FFCP PHASE2:Hg19::chr11:74751521..74751532,+#_c3f098ff1ab9c551fe3324d7b60f1816p@chr11:74751521..74751532, +
2.72e-27FFCP PHASE1:Hg19::chr4:69929665..69929672,+#_5eb784ce9e72445c80c31dbd649250abp@chr4:69929665..69929672, +
2.72e-27FFCP PHASE2:Hg19::chr4:69929665..69929672,+#_5eb784ce9e72445c80c31dbd649250abp@chr4:69929665..69929672, +
3.11e-27FFCP PHASE2:Hg19::chr13:37363331..37363344,-#_f0e288215db00e3f0003134add429e96p@chr13:37363331..37363344, -
3.11e-27FFCP PHASE1:Hg19::chr16:34981355..34981367,+#_f0e288215db00e3f0003134add429e96p2@ENST00000516373
3.11e-27FFCP PHASE2:Hg19::chr16:34981355..34981367,+#_f0e288215db00e3f0003134add429e96p2@ENST00000516373
3.11e-27FFCP PHASE1:Hg19::chr15:75045404..75045444,+#_f0e288215db00e3f0003134add429e96p@chr15:75045404..75045444, +
3.11e-27FFCP PHASE2:Hg19::chr15:75045404..75045444,+#_f0e288215db00e3f0003134add429e96p@chr15:75045404..75045444, +
3.11e-27FFCP PHASE1:Hg19::chr13:37363331..37363344,-#_f0e288215db00e3f0003134add429e96p@chr13:37363331..37363344, -
2.36e-24FFCP PHASE1:Hg19::chr1:153599635..153599646,-#_dc7fc0462d1f40d70509938c821bad74p17@S100A13
2.36e-24FFCP PHASE2:Hg19::chr1:153599635..153599646,-#_dc7fc0462d1f40d70509938c821bad74p17@S100A13

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