FFCP PHASE1:Mm9::chr16:10785618..10785636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12703 | |EntrezGene=12703 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=O35716 | |UniProt=O35716 | ||
|association_with_transcript=0bp_to_ENSMUST00000038099,NM_009896,uc007yed.1_5end | |association_with_transcript=0bp_to_ENSMUST00000038099,NM_009896,uc007yed.1_5end | ||
|cluster_id=chr16:10785618..10785636,- | |||
|description=CAGE_peak_1_at_Socs1_5end | |description=CAGE_peak_1_at_Socs1_5end | ||
|id=chr16:10785618..10785636,- | |id=chr16:10785618..10785636,- | ||
|ontology_enrichment_celltype=CL:0000838!3.59e-08!12;CL:0000084!7.21e-08!11;CL:0000827!7.21e-08!11;CL:0000542!1.40e-07!13;CL:0000051!1.40e-07!13;CL:0000738!3.37e-07!17;CL:0002087!3.37e-07!17;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9 | |ontology_enrichment_celltype=CL:0000838!3.59e-08!12;CL:0000084!7.21e-08!11;CL:0000827!7.21e-08!11;CL:0000542!1.40e-07!13;CL:0000051!1.40e-07!13;CL:0000738!3.37e-07!17;CL:0002087!3.37e-07!17;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.59e-08,12;CL:0000084,7.21e-08,11;CL:0000827,7.21e-08,11;CL:0000542,1.39e-07,13;CL:0000051,1.39e-07,13;CL:0000738,3.37e-07,17;CL:0002087,3.37e-07,17;CL:0000791,6.60e-07,9;CL:0000789,6.60e-07,9;CL:0002420,6.60e-07,9;CL:0002419,6.60e-07,9;CL:0000790,6.60e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.03e-14!23;UBERON:0000974!1.03e-14!23;UBERON:0004807!1.03e-14!23;UBERON:0005058!1.03e-14!23;UBERON:0003351!1.03e-14!23;UBERON:0009113!1.03e-14!23;UBERON:0003295!1.03e-14!23;UBERON:0009722!1.03e-14!23;UBERON:0005562!1.03e-14!23;UBERON:0007690!1.03e-14!23;UBERON:0006562!8.64e-14!24;UBERON:0001557!8.64e-14!24;UBERON:0001042!8.64e-14!24;UBERON:0008814!8.64e-14!24;UBERON:0009145!8.64e-14!24;UBERON:0003408!1.13e-13!24;UBERON:0004177!2.96e-12!29;UBERON:0000065!9.03e-11!41;UBERON:0001004!3.14e-10!42;UBERON:0000072!3.90e-10!27;UBERON:0002193!4.12e-09!48;UBERON:0002390!6.39e-08!45;UBERON:0003061!6.39e-08!45;UBERON:0000063!3.49e-07!35;UBERON:0005911!4.36e-07!69;UBERON:0000490!4.82e-07!66 | |ontology_enrichment_uberon=UBERON:0002370!1.03e-14!23;UBERON:0000974!1.03e-14!23;UBERON:0004807!1.03e-14!23;UBERON:0005058!1.03e-14!23;UBERON:0003351!1.03e-14!23;UBERON:0009113!1.03e-14!23;UBERON:0003295!1.03e-14!23;UBERON:0009722!1.03e-14!23;UBERON:0005562!1.03e-14!23;UBERON:0007690!1.03e-14!23;UBERON:0006562!8.64e-14!24;UBERON:0001557!8.64e-14!24;UBERON:0001042!8.64e-14!24;UBERON:0008814!8.64e-14!24;UBERON:0009145!8.64e-14!24;UBERON:0003408!1.13e-13!24;UBERON:0004177!2.96e-12!29;UBERON:0000065!9.03e-11!41;UBERON:0001004!3.14e-10!42;UBERON:0000072!3.90e-10!27;UBERON:0002193!4.12e-09!48;UBERON:0002390!6.39e-08!45;UBERON:0003061!6.39e-08!45;UBERON:0000063!3.49e-07!35;UBERON:0005911!4.36e-07!69;UBERON:0000490!4.82e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-14,23;UBERON:0000974,1.03e-14,23;UBERON:0004807,1.03e-14,23;UBERON:0005058,1.03e-14,23;UBERON:0003351,1.03e-14,23;UBERON:0009113,1.03e-14,23;UBERON:0003295,1.03e-14,23;UBERON:0009722,1.03e-14,23;UBERON:0005562,1.03e-14,23;UBERON:0007690,1.03e-14,23;UBERON:0006562,8.63e-14,24;UBERON:0001557,8.63e-14,24;UBERON:0001042,8.63e-14,24;UBERON:0008814,8.63e-14,24;UBERON:0009145,8.63e-14,24;UBERON:0003408,1.13e-13,24;UBERON:0004177,2.96e-12,29;UBERON:0005057,2.96e-12,29;UBERON:0000077,3.12e-11,35;UBERON:0000065,9.02e-11,41;UBERON:0001004,3.14e-10,42;UBERON:0000072,3.90e-10,27;UBERON:0000926,1.14e-09,120;UBERON:0004120,1.14e-09,120;UBERON:0006603,1.14e-09,120;UBERON:0000153,2.09e-09,43;UBERON:0002193,4.31e-09,48;UBERON:0002405,4.31e-09,48;UBERON:0007811,3.75e-08,36;UBERON:0002390,6.66e-08,45;UBERON:0003061,6.66e-08,45;UBERON:0005911,4.32e-07,69;UBERON:0000490,4.78e-07,66 | |||
|phase1_expression=19.6983081938897,75.0297126424626,73.7098767811048,19.660173734944,28.5510566069418,32.9043372947304,26.1646157466989,158.563441186256,971.582971568652,1069.67488529151,49.824428753622,57.6752709536282,61.9746642350965,59.4458736449182,3.33109761815663,3.03712901084739,0.699561878128147,15.1421839371954,11.7918412900935,13.580468857537,9.43980520676875,31.4752315306806,37.8739694251456,20.9590073859363,34.1819828790083,68.3336037296874,41.3531516312712,57.9617615925042,21.4726463985703,21.674591159354,51.663208982686,3.81018404075779,3.07532393792285,0,8.66554859253824,5.65197794218874,14.0876855821035,30.5528090437943,13.2827008569046,16.7527598071615,21.7645650571475,27.3218193983378,28.6451108288381,10.0717454380462,10.3404469843905,19.6395024812999,36.7723931843578,1.09012578190223,7.90870257844099,3.30530828426282,5.5994568650145,5.75010257459886,16.9460432118314,48.5992635147601,52.7667264653668,3.8588915405392,5.15760191889762,4.64104883049698,2.63011399117477,2.11596391708813,0.633831403506179,19.6529828600097,26.6788438833342,6.74924787961049,3.9554654502679,8.5257613793532,17.6764065205859,20.7477884873639,0.622137673850866,0.675029691658453,1.05162480675691,2.85650984403804,4.8591079009355,0,0.191690942036473,0,2.20231761998777,1.78762273319263,0.614426133024974,2.1101806036831,2.10421580285542,1.04182674111352,2.23346399201105,1.68828783009504,1.37518422999129,4.71405736757868,2.56269025438385,3.72798891650601,23.7022985132866,42.0933589794795,86.9593466105033,23.2314446784974,4.0798280022465,0.539703191637817,2.59910566979068,2.24013443548668,7.16266542671934,14.827438064291,7.53379413348319,8.48014978824817,16.6195235336483,21.815501160434,15.2883143823987,14.2213340630666,2.59789249213457,1.77351905832569,1.01104889002957,7.30776830201984,27.7063535502474,10.0940654564081,8.84775166507293,8.52503339273995,7.37969591219387,10.7013074792362,5.76184664964954,8.67099480174761,41.2815596116404,5.20557684911682,9.73071607144862,12.1325137460557,11.0420759230197,9.69750506270444,11.1835056730873,3.51336956413857,3.35114730901528,17.3710797541842,6.94927722134338,6.59893004092748,4.57452817463033,2.39665023047716,0.915001205637253,1.88481528169297,1.73824320192276,2.04572365864264,3.53239675751252,0.648965052271031,10.3876151127323,11.9430691785689,1.51633655060205,3.15662783829711,5.46505860443356,6.66716102857071,4.68161537493908,4.37043971723574,3.74200745332303,4.35586648968489,3.74806898238915,1.29351685369508,6.89817577385095,7.56424320671277,12.1406275673125,16.001288467213,15.8486932058591,12.537077994798,15.8452245034116,9.35461054046918,2.1066395619397,2.05878325691772,3.40996199274711,5.38527008592305,4.22146907965973,2.16074473753218,5.91861838963026,3.73852040320067,3.70241070929708,3.95307706075693,2.41446061259657,5.3712057488898,4.27855609775049,5.74586124276833,4.45878452502207,6.28659945928929,5.70830299756732,4.69722465661301,1.05144974282064,2.46971069710283,8.59088835757875,8.19796756656987,5.75878276445132,6.73486348395272,4.51036114627327,4.03367049246685,6.0042071838115,5.89699440948933,6.64340686162316,2.9645811850322,5.02670417600539,4.77495532898762,5.65395852645448,3.59527763461689,4.32276099749388,3.98282546508734,10.4317345524195,5.71242563048644,10.1436962105772,5.90588850751411,6.98228953803453,5.04977903210294,3.47800954183415,2.36176236767363,2.511979645462,2.83813477020141,1.77871576252289,2.8363667971736,1.76903095601883,1.79889689907883,2.02860121388503,2.65294875727659,3.05551022137704,4.31544206176216,3.72911021582581,2.47105271869273,18.6898668485561,3.72140947668503,4.05648975048929,3.03094653536534,2.87035861635059,4.82443521363367,8.12914036733061,8.33762211790133,5.54080919902888,5.43184274480602,6.10194645550105,9.88286918906713,7.61739650835244,9.36641509717434,14.6600684018758,14.3952048271704,16.2643864030637,12.1258852889646,16.577758259126,9.83613598354279,4.52373851817817,5.98296252200581,0.491764273019036,5.51873492609465,1.44495530989013,1.52375192569864,16.7213644284209,5.80683132570058,2.2085575359138,1.56175497718655,3.01592756825919,2.38968797952552,1.78238939265915,5.37845408498782,2.83367491172426,1.75353514746787,3.95287777946523,0.642642632843614,7.94864477166304,16.025904330053,10.9134262766896,14.8473110675282,2.65490276679926,5.34117399540959,4.83717691143602,3.39489143560617,4.72483028609236,6.7635732547664,5.42699415653264,3.99887102425256,2.85197902707777,1.8962205476149,3.16255825724996,2.06271086496374,8.85142974959849,6.84232157318979,5.6917820864412,6.64444808597936,7.80297028026004,9.0968096977056,9.05019613311665,10.656273219011,3.28540391289194,6.77862626764225,4.41056796109924,9.0687439117814,8.88054346827481,10.072258463002,8.11731939221328,7.05805868903763,3.49777003955821,1.29797711407357,10.9357363710626,7.22354037871279,9.4449208958553,2.82552685507037,4.23752105935178,6.63456702298916,14.2781881194838,22.112329467138,13.5435974328335,5.72802370809068,15.9749676758473,10.5726122905961,7.34436317588249,6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|phase1_expression=19.6983081938897,75.0297126424626,73.7098767811048,19.660173734944,28.5510566069418,32.9043372947304,26.1646157466989,158.563441186256,971.582971568652,1069.67488529151,49.824428753622,57.6752709536282,61.9746642350965,59.4458736449182,3.33109761815663,3.03712901084739,0.699561878128147,15.1421839371954,11.7918412900935,13.580468857537,9.43980520676875,31.4752315306806,37.8739694251456,20.9590073859363,34.1819828790083,68.3336037296874,41.3531516312712,57.9617615925042,21.4726463985703,21.674591159354,51.663208982686,3.81018404075779,3.07532393792285,0,8.66554859253824,5.65197794218874,14.0876855821035,30.5528090437943,13.2827008569046,16.7527598071615,21.7645650571475,27.3218193983378,28.6451108288381,10.0717454380462,10.3404469843905,19.6395024812999,36.7723931843578,1.09012578190223,7.90870257844099,3.30530828426282,5.5994568650145,5.75010257459886,16.9460432118314,48.5992635147601,52.7667264653668,3.8588915405392,5.15760191889762,4.64104883049698,2.63011399117477,2.11596391708813,0.633831403506179,19.6529828600097,26.6788438833342,6.74924787961049,3.9554654502679,8.5257613793532,17.6764065205859,20.7477884873639,0.622137673850866,0.675029691658453,1.05162480675691,2.85650984403804,4.8591079009355,0,0.191690942036473,0,2.20231761998777,1.78762273319263,0.614426133024974,2.1101806036831,2.10421580285542,1.04182674111352,2.23346399201105,1.68828783009504,1.37518422999129,4.71405736757868,2.56269025438385,3.72798891650601,23.7022985132866,42.0933589794795,86.9593466105033,23.2314446784974,4.0798280022465,0.539703191637817,2.59910566979068,2.24013443548668,7.16266542671934,14.827438064291,7.53379413348319,8.48014978824817,16.6195235336483,21.815501160434,15.2883143823987,14.2213340630666,2.59789249213457,1.77351905832569,1.01104889002957,7.30776830201984,27.7063535502474,10.0940654564081,8.84775166507293,8.52503339273995,7.37969591219387,10.7013074792362,5.76184664964954,8.67099480174761,41.2815596116404,5.20557684911682,9.73071607144862,12.1325137460557,11.0420759230197,9.69750506270444,11.1835056730873,3.51336956413857,3.35114730901528,17.3710797541842,6.94927722134338,6.59893004092748,4.57452817463033,2.39665023047716,0.915001205637253,1.88481528169297,1.73824320192276,2.04572365864264,3.53239675751252,0.648965052271031,10.3876151127323,11.9430691785689,1.51633655060205,3.15662783829711,5.46505860443356,6.66716102857071,4.68161537493908,4.37043971723574,3.74200745332303,4.35586648968489,3.74806898238915,1.29351685369508,6.89817577385095,7.56424320671277,12.1406275673125,16.001288467213,15.8486932058591,12.537077994798,15.8452245034116,9.35461054046918,2.1066395619397,2.05878325691772,3.40996199274711,5.38527008592305,4.22146907965973,2.16074473753218,5.91861838963026,3.73852040320067,3.70241070929708,3.95307706075693,2.41446061259657,5.3712057488898,4.27855609775049,5.74586124276833,4.45878452502207,6.28659945928929,5.70830299756732,4.69722465661301,1.05144974282064,2.46971069710283,8.59088835757875,8.19796756656987,5.75878276445132,6.73486348395272,4.51036114627327,4.03367049246685,6.0042071838115,5.89699440948933,6.64340686162316,2.9645811850322,5.02670417600539,4.77495532898762,5.65395852645448,3.59527763461689,4.32276099749388,3.98282546508734,10.4317345524195,5.71242563048644,10.1436962105772,5.90588850751411,6.98228953803453,5.04977903210294,3.47800954183415,2.36176236767363,2.511979645462,2.83813477020141,1.77871576252289,2.8363667971736,1.76903095601883,1.79889689907883,2.02860121388503,2.65294875727659,3.05551022137704,4.31544206176216,3.72911021582581,2.47105271869273,18.6898668485561,3.72140947668503,4.05648975048929,3.03094653536534,2.87035861635059,4.82443521363367,8.12914036733061,8.33762211790133,5.54080919902888,5.43184274480602,6.10194645550105,9.88286918906713,7.61739650835244,9.36641509717434,14.6600684018758,14.3952048271704,16.2643864030637,12.1258852889646,16.577758259126,9.83613598354279,4.52373851817817,5.98296252200581,0.491764273019036,5.51873492609465,1.44495530989013,1.52375192569864,16.7213644284209,5.80683132570058,2.2085575359138,1.56175497718655,3.01592756825919,2.38968797952552,1.78238939265915,5.37845408498782,2.83367491172426,1.75353514746787,3.95287777946523,0.642642632843614,7.94864477166304,16.025904330053,10.9134262766896,14.8473110675282,2.65490276679926,5.34117399540959,4.83717691143602,3.39489143560617,4.72483028609236,6.7635732547664,5.42699415653264,3.99887102425256,2.85197902707777,1.8962205476149,3.16255825724996,2.06271086496374,8.85142974959849,6.84232157318979,5.6917820864412,6.64444808597936,7.80297028026004,9.0968096977056,9.05019613311665,10.656273219011,3.28540391289194,6.77862626764225,4.41056796109924,9.0687439117814,8.88054346827481,10.072258463002,8.11731939221328,7.05805868903763,3.49777003955821,1.29797711407357,10.9357363710626,7.22354037871279,9.4449208958553,2.82552685507037,4.23752105935178,6.63456702298916,14.2781881194838,22.112329467138,13.5435974328335,5.72802370809068,15.9749676758473,10.5726122905961,7.34436317588249,6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| ||
|short_description=p1@Socs1 | |short_description=p1@Socs1 | ||
}} | }} |
Latest revision as of 14:44, 1 October 2015
Short description: | p1@Socs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Socs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000038099, NM_009896, uc007yed.1_5end |
EntrezGene: | Socs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.59e-08 | 12 |
T cell | 7.21e-08 | 11 |
pro-T cell | 7.21e-08 | 11 |
lymphocyte | 1.39e-07 | 13 |
common lymphoid progenitor | 1.39e-07 | 13 |
leukocyte | 3.37e-07 | 17 |
nongranular leukocyte | 3.37e-07 | 17 |
mature alpha-beta T cell | 6.60e-07 | 9 |
alpha-beta T cell | 6.60e-07 | 9 |
immature T cell | 6.60e-07 | 9 |
mature T cell | 6.60e-07 | 9 |
immature alpha-beta T cell | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-14 | 23 |
neck | 1.03e-14 | 23 |
respiratory system epithelium | 1.03e-14 | 23 |
hemolymphoid system gland | 1.03e-14 | 23 |
pharyngeal epithelium | 1.03e-14 | 23 |
thymic region | 1.03e-14 | 23 |
pharyngeal gland | 1.03e-14 | 23 |
entire pharyngeal arch endoderm | 1.03e-14 | 23 |
thymus primordium | 1.03e-14 | 23 |
early pharyngeal endoderm | 1.03e-14 | 23 |
pharynx | 8.63e-14 | 24 |
upper respiratory tract | 8.63e-14 | 24 |
chordate pharynx | 8.63e-14 | 24 |
pharyngeal arch system | 8.63e-14 | 24 |
pharyngeal region of foregut | 8.63e-14 | 24 |
gland of gut | 1.13e-13 | 24 |
hemopoietic organ | 2.96e-12 | 29 |
immune organ | 2.96e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 3.12e-11 | 35 |
respiratory tract | 9.02e-11 | 41 |
respiratory system | 3.14e-10 | 42 |
segment of respiratory tract | 3.90e-10 | 27 |
mesoderm | 1.14e-09 | 120 |
mesoderm-derived structure | 1.14e-09 | 120 |
presumptive mesoderm | 1.14e-09 | 120 |
anterior region of body | 2.09e-09 | 43 |
hemolymphoid system | 4.31e-09 | 48 |
immune system | 4.31e-09 | 48 |
craniocervical region | 3.75e-08 | 36 |
hematopoietic system | 6.66e-08 | 45 |
blood island | 6.66e-08 | 45 |
endo-epithelium | 4.32e-07 | 69 |
unilaminar epithelium | 4.78e-07 | 66 |