FFCP PHASE1:Mm9::chr16:28930099..28930166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239796 | |EntrezGene=239796 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z742 | |UniProt=D3Z742 | ||
|association_with_transcript=-315bp_to_ENSMUST00000100023,NM_177718,uc007yvv.1_5end | |association_with_transcript=-315bp_to_ENSMUST00000100023,NM_177718,uc007yvv.1_5end | ||
|cluster_id=chr16:28930099..28930166,- | |||
|description=CAGE_peak_1_at_1600021P15Rik_5end | |description=CAGE_peak_1_at_1600021P15Rik_5end | ||
|id=chr16:28930099..28930166,- | |id=chr16:28930099..28930166,- | ||
|ontology_enrichment_celltype=CL:0000117!1.56e-13!23;CL:0000337!1.56e-13!23;CL:0000540!1.01e-10!33;CL:0000047!1.01e-10!33;CL:0000031!1.01e-10!33;CL:0000404!1.01e-10!33;CL:0000393!5.50e-07!39;CL:0000211!5.50e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.56e-13!23;CL:0000337!1.56e-13!23;CL:0000540!1.01e-10!33;CL:0000047!1.01e-10!33;CL:0000031!1.01e-10!33;CL:0000404!1.01e-10!33;CL:0000393!5.50e-07!39;CL:0000211!5.50e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.33e-14,23;CL:0000337,9.33e-14,23;CL:0000540,8.97e-11,33;CL:0000047,8.97e-11,33;CL:0000031,8.97e-11,33;CL:0000404,8.97e-11,33;CL:0000393,5.65e-07,39;CL:0000211,5.65e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.39e-22!52;UBERON:0005068!4.39e-22!52;UBERON:0006241!4.39e-22!52;UBERON:0007135!4.39e-22!52;UBERON:0001017!6.31e-22!73;UBERON:0005743!6.31e-22!73;UBERON:0002346!8.16e-22!71;UBERON:0003075!8.16e-22!71;UBERON:0007284!8.16e-22!71;UBERON:0004121!1.21e-21!102;UBERON:0000924!1.21e-21!102;UBERON:0006601!1.21e-21!102;UBERON:0000033!6.89e-21!63;UBERON:0000073!2.09e-20!75;UBERON:0001016!2.09e-20!75;UBERON:0000955!7.14e-20!50;UBERON:0006238!7.14e-20!50;UBERON:0002616!2.24e-19!49;UBERON:0003056!1.12e-17!49;UBERON:0003080!2.37e-17!40;UBERON:0002780!8.32e-17!39;UBERON:0001890!8.32e-17!39;UBERON:0006240!8.32e-17!39;UBERON:0002020!1.77e-16!34;UBERON:0004111!5.02e-16!122;UBERON:0000025!4.05e-15!114;UBERON:0000468!2.11e-13!333;UBERON:0002791!3.87e-13!29;UBERON:0003528!3.87e-13!29;UBERON:0001893!3.87e-13!29;UBERON:0000922!5.91e-10!328;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002619!4.05e-07!17;UBERON:0000153!5.62e-07!94;UBERON:0007811!9.21e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!4.39e-22!52;UBERON:0005068!4.39e-22!52;UBERON:0006241!4.39e-22!52;UBERON:0007135!4.39e-22!52;UBERON:0001017!6.31e-22!73;UBERON:0005743!6.31e-22!73;UBERON:0002346!8.16e-22!71;UBERON:0003075!8.16e-22!71;UBERON:0007284!8.16e-22!71;UBERON:0004121!1.21e-21!102;UBERON:0000924!1.21e-21!102;UBERON:0006601!1.21e-21!102;UBERON:0000033!6.89e-21!63;UBERON:0000073!2.09e-20!75;UBERON:0001016!2.09e-20!75;UBERON:0000955!7.14e-20!50;UBERON:0006238!7.14e-20!50;UBERON:0002616!2.24e-19!49;UBERON:0003056!1.12e-17!49;UBERON:0003080!2.37e-17!40;UBERON:0002780!8.32e-17!39;UBERON:0001890!8.32e-17!39;UBERON:0006240!8.32e-17!39;UBERON:0002020!1.77e-16!34;UBERON:0004111!5.02e-16!122;UBERON:0000025!4.05e-15!114;UBERON:0000468!2.11e-13!333;UBERON:0002791!3.87e-13!29;UBERON:0003528!3.87e-13!29;UBERON:0001893!3.87e-13!29;UBERON:0000922!5.91e-10!328;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002619!4.05e-07!17;UBERON:0000153!5.62e-07!94;UBERON:0007811!9.21e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.11e-24,92;UBERON:0000073,4.50e-23,54;UBERON:0001049,3.01e-22,52;UBERON:0005068,3.01e-22,52;UBERON:0006241,3.01e-22,52;UBERON:0007135,3.01e-22,52;UBERON:0001017,9.70e-22,73;UBERON:0002346,3.96e-21,64;UBERON:0003075,3.96e-21,64;UBERON:0007284,3.96e-21,64;UBERON:0004121,3.38e-20,95;UBERON:0000924,3.38e-20,95;UBERON:0006601,3.38e-20,95;UBERON:0001016,5.25e-20,75;UBERON:0010371,8.79e-20,73;UBERON:0000955,1.12e-18,47;UBERON:0006238,1.12e-18,47;UBERON:0002616,3.51e-18,46;UBERON:0003056,9.04e-18,49;UBERON:0003080,1.21e-17,40;UBERON:0002780,4.33e-17,39;UBERON:0001890,4.33e-17,39;UBERON:0006240,4.33e-17,39;UBERON:0002020,9.32e-17,34;UBERON:0004111,5.48e-16,122;UBERON:0000025,4.55e-15,114;UBERON:0003528,2.36e-13,29;UBERON:0002791,2.36e-13,29;UBERON:0001893,2.36e-13,29;UBERON:0000922,1.84e-10,320;UBERON:0000956,5.92e-09,21;UBERON:0001869,5.92e-09,21;UBERON:0000203,5.92e-09,21;UBERON:0002619,3.19e-07,17 | |||
|phase1_expression=5.44506080156299,0.697950815278722,1.36499771816861,1.20985684522732,2.50447864973174,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.53077922271926,0,0,0.319984845586813,0,0,0.430761996159075,0.861884930743556,0.380046838912748,0.756090389279792,0.665191531965914,0,0,0,1.44425809875637,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,1.96222640742402,2.63623419281366,1.94429899074283,0.979904951377538,2.87505128729943,0,0,0,1.80081605225163,0.85960031981627,1.54701627683233,14.9714181036102,17.4567023159771,13.3104594736298,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,1.49800055259202,1.92109152660777,6.0139975138917,5.94026128659439,6.09942387919008,11.9973413449598,10.3808214247258,6.85948475603743,5.46319184803947,8.27296907949019,4.40463523997555,7.15049093277051,9.98442466165583,17.4089899803856,18.6634792948916,17.1901412283731,6.70039197603314,9.56696437053856,5.19514042441154,20.3293723976831,13.2405663143166,20.5039390407831,0.605809546665472,0.529000920747499,8.11620568364698,2.58127163094416,0,4.31762553310254,3.89865850468601,2.68816132258401,0.702222100658759,0.340860645156116,0.519572009205738,0.35333957451034,4.08445917352373,0,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0.91347103775248,0.258937883647172,3.56261133755579,2.77576522825817,7.30717147949139,4.84292544237723,4.52167921657868,4.46837087115678,1.88499886994513,4.94389935468748,2.02439099687876,0.884610551949874,2.58826959915855,0.662524555381181,1.93950101254089,7.45567044872489,11.4184510834503,12.3573557019938,4.59822699375465,0.11981512450592,0,0,7.48953197024113,6.40500843946077,9.80103946480342,9.56033761057521,7.41574826257959,9.97382613885888,11.356888414743,3.86989582631202,1.99051152976149,2.77995034277042,0.841767423545896,3.3831315170303,5.51765050640335,4.86167750474443,4.21973489940002,3.19771546011241,4.74020765053944,4.02917415606834,5.95017752699736,4.95806383745537,4.34943984385984,4.92663147659057,2.41115305670332,4.44875598760957,3.1342694986995,2.46938563689532,1.99034266818493,0,0,0,3.72826390563903,5.15957331958412,4.32148947506436,3.07768156260773,4.9191057936851,3.70241070929708,3.48800917125612,3.75582761959467,4.08678698285093,3.45575684818309,4.92502392237286,5.59374785866405,5.11699955988663,4.83010253640311,5.36825675041487,8.83217783969334,13.0688857721691,3.63460661282178,3.96675849995316,5.11891801284562,3.0190767341857,4.76809606891745,2.21851877085677,2.00140239460383,3.04361001780095,2.84717436926707,3.12928013975621,4.52403375840485,3.97912944082302,3.31438948102504,2.69645822596266,3.02593269824572,4.97853183135918,3.79335801906163,2.97046132785295,5.63538678365402,3.05476991767971,2.52138233317913,4.27828501330943,3.28829993046138,2.95220295959204,2.66897837330337,3.45512058981041,4.74324203339438,1.16791574001266,0.196558995113203,0.899448449539415,0.608580364165509,0.241177159752417,2.80088436959562,2.30156909960649,1.78348749452539,2.19649130550465,4.31304619582064,3.34926852901653,3.12037673114561,3.28352541331245,4.30553792452589,4.3419916922703,2.03228509183265,4.73728529426212,2.93336957595647,2.20668611507745,3.52035372432753,2.51259386162724,3.57065461329021,3.31727201358258,4.41378403497335,3.10050565508285,2.87018583583477,3.76885623846197,2.76295970985433,3.18227928879325,0,0,1.96705709207614,1.93155722413313,6.10092241953609,5.97779601620236,0.491804836130026,4.03953483526997,0.631016438832513,1.17131623288992,4.73931475012158,1.91175038362042,4.67877215573028,3.67999490025482,1.21443210502468,3.21481443702443,3.55759000151871,6.42642632843614,3.26462195979018,3.02711526234334,3.09485222771795,2.63952196756057,0,2.18502572539483,2.11626489875326,1.13163047853539,1.18120757152309,1.22974059177571,1.55056975900933,1.45413491791002,2.13898427030833,2.52829406348653,1.05418608574999,0,8.85142974959849,6.30213829109586,5.95049945400671,4.92975180572662,6.56158864476412,3.0322698992352,4.77192159746151,5.17590413494819,2.11204537257339,1.69465656691056,1.32317038832977,3.62749756471256,3.55221738730992,2.83470747162333,2.74556391207214,1.96969079694074,2.91480836629851,6.86073617438886,0.341741761595705,1.857481811669,1.48155621895769,0.188368457004691,0,0.915112692826091,0.679913719975421,0.139951452323658,1.10559979043539,0.954670618015114,4.4287039101359,2.23651413839534,2.48412283890143,3.76358932826044,3.9305261474312,3.10187996685088,3.14083131756277,3.40282724579238,2.33306951925227,1.86401793926078,1.12738587736838,3.13984746692355,2.31641886639937,1.36115831840833,2.0665571756437,2.19642963138012,3.75543163666413,4.29674469985035,3.04092098834561,0.966336483304024,0.864090018773596,0.316011120628178,2.43270258348197,1.54066435747241,0.649604114888975,0.716106782669926,0.39736270956253,0.240390899039938,0.443068581523732,0.403865799792591,0.304827226619999,0.302478555410522,0.38983152295901,0.0962118416403295,0.116876902181569,6.80191150845634,0.665957860122194,0.8074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| ||
|short_description=p1@1600021P15Rik | |short_description=p1@1600021P15Rik | ||
}} | }} |
Latest revision as of 20:30, 1 October 2015
Short description: | p1@1600021P15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1600021P15Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -315bp_to_ENSMUST00000100023, NM_177718, uc007yvv.1_5end |
EntrezGene: | 1600021P15Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.33e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.33e-14 | 23 |
neuron | 8.97e-11 | 33 |
neuronal stem cell | 8.97e-11 | 33 |
neuroblast | 8.97e-11 | 33 |
electrically signaling cell | 8.97e-11 | 33 |
electrically responsive cell | 5.65e-07 | 39 |
electrically active cell | 5.65e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.11e-24 | 92 |
regional part of nervous system | 4.50e-23 | 54 |
neural tube | 3.01e-22 | 52 |
neural rod | 3.01e-22 | 52 |
future spinal cord | 3.01e-22 | 52 |
neural keel | 3.01e-22 | 52 |
central nervous system | 9.70e-22 | 73 |
neurectoderm | 3.96e-21 | 64 |
neural plate | 3.96e-21 | 64 |
presumptive neural plate | 3.96e-21 | 64 |
ectoderm-derived structure | 3.38e-20 | 95 |
ectoderm | 3.38e-20 | 95 |
presumptive ectoderm | 3.38e-20 | 95 |
nervous system | 5.25e-20 | 75 |
ecto-epithelium | 8.79e-20 | 73 |
brain | 1.12e-18 | 47 |
future brain | 1.12e-18 | 47 |
regional part of brain | 3.51e-18 | 46 |
pre-chordal neural plate | 9.04e-18 | 49 |
anterior neural tube | 1.21e-17 | 40 |
regional part of forebrain | 4.33e-17 | 39 |
forebrain | 4.33e-17 | 39 |
future forebrain | 4.33e-17 | 39 |
gray matter | 9.32e-17 | 34 |
anatomical conduit | 5.48e-16 | 122 |
tube | 4.55e-15 | 114 |
brain grey matter | 2.36e-13 | 29 |
regional part of telencephalon | 2.36e-13 | 29 |
telencephalon | 2.36e-13 | 29 |
embryo | 1.84e-10 | 320 |
cerebral cortex | 5.92e-09 | 21 |
cerebral hemisphere | 5.92e-09 | 21 |
pallium | 5.92e-09 | 21 |
regional part of cerebral cortex | 3.19e-07 | 17 |