UBERON:0000122: Difference between revisions
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|def="A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." [CARO:0001001, FBbt:00005099, FBC:DOS] | |def="A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." [CARO:0001001, FBbt:00005099, FBC:DOS] | ||
|xref=CARO:0001001;;FBbt:00005099 | |xref=CARO:0001001;;FBbt:00005099 | ||
|is_a=UBERON: | |is_a=UBERON:0004121;;UBERON:0005162 | ||
|synonym="funiculus" EXACT [];;"nerve fiber bundle" EXACT [FBbt:00005099];;"neural fiber bundle" EXACT [] | |synonym="funiculus" EXACT [];;"nerve fiber bundle" EXACT [FBbt:00005099];;"neural fiber bundle" EXACT [] | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 16:56, 26 June 2012
| Name: | neuron projection bundle | ||
|---|---|---|---|
| Definition: | "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." [CARO:0001001, FBbt:00005099, FBC:DOS] | ||
| Xrefs: |
| ||
| Synonyms: |
"funiculus" EXACT [] "nerve fiber bundle" EXACT [FBbt:00005099] "neural fiber bundle" EXACT [] | ||
| Alt_id: | UBERON:0005163 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004121(ectoderm-derived structure),UBERON:0005162(multi cell component structure) |
|---|
Children
| is a: | UBERON:0001018 (axon tract),UBERON:0001021 (nerve) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10042-101F6 (corpus callosum, adult, pool1)
- 10277-104E7 (optic nerve, donor1)
- 10280-104F1
- 10305-104H8
- 10308-104I2
- 10333-105B9
- 10336-105C3
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Mouse (Mus musculus)
- 10042-101F6 (corpus callosum, adult, pool1)
- 10277-104E7 (optic nerve, donor1)
- 10280-104F1
- 10305-104H8
- 10308-104I2
- 10333-105B9
- 10336-105C3
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000122 (neuron projection bundle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.29e-195 | FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_a8c3657c1c4aa97f914cb3ea4b166f71 | p41@NAV3 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_a8c3657c1c4aa97f914cb3ea4b166f71 | p41@NAV3 |
| 4.61e-131 | FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_4a2b19d24222ae4d90d2d84147213aee | p32@NAV3 |
| 4.61e-131 | FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_4a2b19d24222ae4d90d2d84147213aee | p32@NAV3 |
| 8.99e-131 | FFCP PHASE1:Hg19::chr4:645709..645712,+#_900de1abb7a6bee0f16422626843351b | p15@PDE6B |
| 8.99e-131 | FFCP PHASE2:Hg19::chr4:645709..645712,+#_900de1abb7a6bee0f16422626843351b | p15@PDE6B |
| 5.68e-99 | FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_eb07e1343b541846410a8576d2de3289 | p@chrX:103031196..103031205, - |
| 5.68e-99 | FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_eb07e1343b541846410a8576d2de3289 | p@chrX:103031196..103031205, - |
| 5.68e-99 | FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_eb07e1343b541846410a8576d2de3289 | p@chr4:74005833..74005844, - |
| 5.68e-99 | FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_eb07e1343b541846410a8576d2de3289 | p@chr4:74005833..74005844, - |
| 9.38e-99 | FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_ab29d9ae1827d8c42e71cb5242e4b6a3 | p8@TRIM59 |
| 9.38e-99 | FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_ab29d9ae1827d8c42e71cb5242e4b6a3 | p@chr17:36726052..36726061, - |
| 9.38e-99 | FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_ab29d9ae1827d8c42e71cb5242e4b6a3 | p8@TRIM59 |
| 9.38e-99 | FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_ab29d9ae1827d8c42e71cb5242e4b6a3 | p@chr17:36726052..36726061, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_170543cb3eaa3a41ffc53a03e50ad3cc | p3@BC032909, p3@BC032910 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr14:36462819..36462832, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr17:73689469..73689476, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_170543cb3eaa3a41ffc53a03e50ad3cc | p3@BC032909, p3@BC032910 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr15:93827399..93827403, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr7:30202318..30202329, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr15:93827399..93827403, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr14:36462819..36462832, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:57628762..57628773,-#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr12:57628762..57628773, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr17:73689469..73689476, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr7:30202318..30202329, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:57628762..57628773,-#_170543cb3eaa3a41ffc53a03e50ad3cc | p@chr12:57628762..57628773, - |
| 2.56e-98 | FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_f27f7e25763604ffa8c9251668142227 | p8@IL1RAPL1 |
| 2.56e-98 | FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_f27f7e25763604ffa8c9251668142227 | p@chr11:117585539..117585541, - |
| 2.56e-98 | FFCP PHASE1:Hg19::chr11:117585539..117585541,-#_f27f7e25763604ffa8c9251668142227 | p@chr11:117585539..117585541, - |
| 2.56e-98 | FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_f27f7e25763604ffa8c9251668142227 | p8@IL1RAPL1 |
| 4.22e-98 | FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_cfe2ac615fd5487090b1007cad4f3f57 | p38@ANKS1B |
| 4.22e-98 | FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_cfe2ac615fd5487090b1007cad4f3f57 | p38@ANKS1B |
| 1.05e-79 | FFCP PHASE1:Hg19::chr7:123673069..123673078,-#_6e94d089b11eaad2466a4c57b38e4ea7 | p3@TMEM229A |
| 1.05e-79 | FFCP PHASE2:Hg19::chr14:35514351..35514356,+#_6e94d089b11eaad2466a4c57b38e4ea7 | p10@FAM177A1 |
| 1.05e-79 | FFCP PHASE2:Hg19::chr7:123673069..123673078,-#_6e94d089b11eaad2466a4c57b38e4ea7 | p3@TMEM229A |
| 1.05e-79 | FFCP PHASE1:Hg19::chr14:35514351..35514356,+#_6e94d089b11eaad2466a4c57b38e4ea7 | p10@FAM177A1 |
| 1.56e-79 | FFCP PHASE1:Hg19::chr1:113638921..113638937,+#_fc456de42bb3f73ec8e7fb6538fa1f8d | p@chr1:113638921..113638937, + |
| 1.56e-79 | FFCP PHASE1:Hg19::chr7:149480688..149480699,+#_fc456de42bb3f73ec8e7fb6538fa1f8d | p@chr7:149480688..149480699, + |
| 1.56e-79 | FFCP PHASE2:Hg19::chr11:119846488..119846499,+#_fc456de42bb3f73ec8e7fb6538fa1f8d | p@chr11:119846488..119846499, + |
| 1.56e-79 | FFCP PHASE1:Hg19::chr11:119846488..119846499,+#_fc456de42bb3f73ec8e7fb6538fa1f8d | p@chr11:119846488..119846499, + |
| 1.56e-79 | FFCP PHASE2:Hg19::chr7:149480688..149480699,+#_fc456de42bb3f73ec8e7fb6538fa1f8d | p@chr7:149480688..149480699, + |
| 1.56e-79 | FFCP PHASE1:Hg19::chr10:1246202..1246207,-#_fc456de42bb3f73ec8e7fb6538fa1f8d | p19@ADARB2 |
| 1.56e-79 | FFCP PHASE2:Hg19::chr1:113638921..113638937,+#_fc456de42bb3f73ec8e7fb6538fa1f8d | p@chr1:113638921..113638937, + |
| 1.56e-79 | FFCP PHASE2:Hg19::chr10:1246202..1246207,-#_fc456de42bb3f73ec8e7fb6538fa1f8d | p19@ADARB2 |
| 2.34e-79 | FFCP PHASE2:Hg19::chr19:1882247..1882274,-#_a4fb667dd515b4c3b235eb622aa2d49c | p5@FAM108A1 |
| 2.34e-79 | FFCP PHASE2:Hg19::chr5:55069021..55069040,-#_a4fb667dd515b4c3b235eb622aa2d49c | p8@SLC38A9 |
| 2.34e-79 | FFCP PHASE1:Hg19::chr19:1882247..1882274,-#_a4fb667dd515b4c3b235eb622aa2d49c | p5@FAM108A1 |
| 2.34e-79 | FFCP PHASE1:Hg19::chr7:75268487..75268499,-#_a4fb667dd515b4c3b235eb622aa2d49c | p@chr7:75268487..75268499, - |
| 2.34e-79 | FFCP PHASE1:Hg19::chr5:55069021..55069040,-#_a4fb667dd515b4c3b235eb622aa2d49c | p8@SLC38A9 |
| 2.34e-79 | FFCP PHASE2:Hg19::chr7:75268487..75268499,-#_a4fb667dd515b4c3b235eb622aa2d49c | p@chr7:75268487..75268499, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr10:1246245..1246252,-#_ab6e47aa0a35092fa3ec91988bc60e9c | p20@ADARB2 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr22:41636943..41636946,-#_ab6e47aa0a35092fa3ec91988bc60e9c | p12@CHADL |
| 3.49e-79 | FFCP PHASE1:Hg19::chr22:41636943..41636946,-#_ab6e47aa0a35092fa3ec91988bc60e9c | p12@CHADL |
| 3.49e-79 | FFCP PHASE1:Hg19::chr10:1246245..1246252,-#_ab6e47aa0a35092fa3ec91988bc60e9c | p20@ADARB2 |
| 7.41e-67 | FFCP PHASE2:Hg19::chr8:22411813..22411825,+#_1c46410313ccfd06b3ee965ef3237e9d | p55@SORBS3 |
| 7.41e-67 | FFCP PHASE1:Hg19::chr8:22411813..22411825,+#_1c46410313ccfd06b3ee965ef3237e9d | p55@SORBS3 |
| 1.04e-66 | FFCP PHASE1:Hg19::chr17:76227461..76227467,+#_4f1419bfecfe3bbfd99bacab627c51a5 | p17@TMEM235 |
| 1.04e-66 | FFCP PHASE2:Hg19::chr17:76227461..76227467,+#_4f1419bfecfe3bbfd99bacab627c51a5 | p17@TMEM235 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr9:104031973..104031984,+#_263e60191bae68b6376b72f80386e135 | p16@LPPR1 |
| 1.45e-66 | FFCP PHASE2:Hg19::chr3:135974687..135974698,+#_263e60191bae68b6376b72f80386e135 | p5@PCCB |
| 1.45e-66 | FFCP PHASE2:Hg19::chr17:42992088..42992109,-#_263e60191bae68b6376b72f80386e135 | p@chr17:42992088..42992109, - |
| 1.45e-66 | FFCP PHASE2:Hg19::chr9:104031973..104031984,+#_263e60191bae68b6376b72f80386e135 | p16@LPPR1 |
| 1.45e-66 | FFCP PHASE2:Hg19::chr9:92051280..92051285,-#_263e60191bae68b6376b72f80386e135 | p13@SEMA4D |
| 1.45e-66 | FFCP PHASE1:Hg19::chr9:92051280..92051285,-#_263e60191bae68b6376b72f80386e135 | p13@SEMA4D |
| 1.45e-66 | FFCP PHASE2:Hg19::chr2:102413776..102413787,+#_263e60191bae68b6376b72f80386e135 | p41@MAP4K4 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr17:42992088..42992109,-#_263e60191bae68b6376b72f80386e135 | p@chr17:42992088..42992109, - |
| 1.45e-66 | FFCP PHASE1:Hg19::chr2:102413776..102413787,+#_263e60191bae68b6376b72f80386e135 | p41@MAP4K4 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr3:135974687..135974698,+#_263e60191bae68b6376b72f80386e135 | p5@PCCB |
| 2.03e-66 | FFCP PHASE2:Hg19::chr14:75614593..75614605,-#_2d5d41d15e1e1f595f93d1f403e081ba | p13@TMED10 |
| 2.03e-66 | FFCP PHASE1:Hg19::chr2:201599836..201599844,-#_2d5d41d15e1e1f595f93d1f403e081ba | p3@LOC100507140 |
| 2.03e-66 | FFCP PHASE1:Hg19::chr14:75614593..75614605,-#_2d5d41d15e1e1f595f93d1f403e081ba | p13@TMED10 |
| 2.03e-66 | FFCP PHASE1:Hg19::chr16:81652549..81652560,+#_2d5d41d15e1e1f595f93d1f403e081ba | p1@AK094104 |
| 2.03e-66 | FFCP PHASE2:Hg19::chr16:81652549..81652560,+#_2d5d41d15e1e1f595f93d1f403e081ba | p1@AK094104 |
| 2.03e-66 | FFCP PHASE2:Hg19::chr2:201599836..201599844,-#_2d5d41d15e1e1f595f93d1f403e081ba | p3@LOC100507140 |
| 7.73e-66 | FFCP PHASE2:Hg19::chr5:86418005..86418017,-#_f1b916780a4aaa443f09940fe9b99291 | p@chr5:86418005..86418017, - |
| 7.73e-66 | FFCP PHASE1:Hg19::chr5:86418005..86418017,-#_f1b916780a4aaa443f09940fe9b99291 | p@chr5:86418005..86418017, - |
| 1.13e-57 | FFCP PHASE2:Hg19::chr15:79356834..79356842,-#_c730dec71cf054b3c9e56004d803313b | p15@RASGRF1 |
| 1.13e-57 | FFCP PHASE2:Hg19::chr21:45725770..45725792,+#_c730dec71cf054b3c9e56004d803313b | p@chr21:45725770..45725792, + |
| 1.13e-57 | FFCP PHASE1:Hg19::chr10:22892347..22892352,-#_c730dec71cf054b3c9e56004d803313b | p@chr10:22892347..22892352, - |
| 1.13e-57 | FFCP PHASE1:Hg19::chr21:45725770..45725792,+#_c730dec71cf054b3c9e56004d803313b | p@chr21:45725770..45725792, + |
| 1.13e-57 | FFCP PHASE1:Hg19::chr15:79356834..79356842,-#_c730dec71cf054b3c9e56004d803313b | p15@RASGRF1 |
| 1.13e-57 | FFCP PHASE1:Hg19::chr9:135089670..135089681,-#_c730dec71cf054b3c9e56004d803313b | p@chr9:135089670..135089681, - |
| 1.13e-57 | FFCP PHASE2:Hg19::chr9:135089670..135089681,-#_c730dec71cf054b3c9e56004d803313b | p@chr9:135089670..135089681, - |
| 1.13e-57 | FFCP PHASE2:Hg19::chr10:22892347..22892352,-#_c730dec71cf054b3c9e56004d803313b | p@chr10:22892347..22892352, - |
| 1.51e-57 | FFCP PHASE1:Hg19::chr17:76227978..76227989,+#_88a82ed8cfb9fe1ca19a1e008beb872d | p15@TMEM235 |
| 1.51e-57 | FFCP PHASE2:Hg19::chr17:76227978..76227989,+#_88a82ed8cfb9fe1ca19a1e008beb872d | p15@TMEM235 |
| 2.02e-57 | FFCP PHASE1:Hg19::chr8:26491518..26491523,+#_f21effa5915a1bd396a2e98a24839744 | p@chr8:26491518..26491523, + |
| 2.02e-57 | FFCP PHASE1:Hg19::chr1:155940355..155940366,-#_f21effa5915a1bd396a2e98a24839744 | p43@ARHGEF2 |
| 2.02e-57 | FFCP PHASE1:Hg19::chr12:48166059..48166070,+#_f21effa5915a1bd396a2e98a24839744 | p@chr12:48166059..48166070, + |
| 2.02e-57 | FFCP PHASE2:Hg19::chr22:41636994..41637004,-#_f21effa5915a1bd396a2e98a24839744 | p9@CHADL |
| 2.02e-57 | FFCP PHASE2:Hg19::chr8:26491518..26491523,+#_f21effa5915a1bd396a2e98a24839744 | p@chr8:26491518..26491523, + |
| 2.02e-57 | FFCP PHASE1:Hg19::chr3:183543234..183543241,-#_f21effa5915a1bd396a2e98a24839744 | p7@MAP6D1 |
| 2.02e-57 | FFCP PHASE2:Hg19::chr12:48166059..48166070,+#_f21effa5915a1bd396a2e98a24839744 | p@chr12:48166059..48166070, + |
| 2.02e-57 | FFCP PHASE1:Hg19::chr10:14614090..14614091,-#_f21effa5915a1bd396a2e98a24839744 | p22@FAM107B |
| 2.02e-57 | FFCP PHASE1:Hg19::chr22:41636994..41637004,-#_f21effa5915a1bd396a2e98a24839744 | p9@CHADL |
| 2.02e-57 | FFCP PHASE2:Hg19::chr10:14614090..14614091,-#_f21effa5915a1bd396a2e98a24839744 | p22@FAM107B |
| 2.02e-57 | FFCP PHASE2:Hg19::chr3:183543234..183543241,-#_f21effa5915a1bd396a2e98a24839744 | p7@MAP6D1 |
| 2.02e-57 | FFCP PHASE2:Hg19::chr1:155940355..155940366,-#_f21effa5915a1bd396a2e98a24839744 | p43@ARHGEF2 |
| 2.69e-57 | FFCP PHASE2:Hg19::chr19:31158547..31158552,+#_8156c1a0a2740726dd276c4c8acbf190 | p@chr19:31158547..31158552, + |
| 2.69e-57 | FFCP PHASE1:Hg19::chr19:31158547..31158552,+#_8156c1a0a2740726dd276c4c8acbf190 | p@chr19:31158547..31158552, + |
