CL:1001318: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0002113 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:05, 27 June 2012
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000669(pericyte cell),CL:1000497(kidney cell) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | CL:0002173 (extraglomerular mesangial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Mouse (Mus musculus)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1001318 (renal interstitial pericyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.34e-79 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_625fd14176d3df719966b548155a1ff1 | p@chr2:133426030..133426041, - |
| 2.34e-79 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_625fd14176d3df719966b548155a1ff1 | p@chr2:133426030..133426041, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_fd2fdc48964fabe76f742874429fd097 | p23@TTC39A |
| 3.49e-79 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_fd2fdc48964fabe76f742874429fd097 | p23@TTC39A |
| 2.03e-66 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_8cbc48280c9732554dc88e09ae4e7682 | p@chr2:133426106..133426117, - |
| 2.03e-66 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_8cbc48280c9732554dc88e09ae4e7682 | p@chr2:133426106..133426117, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_1d5af8198c447f8eab00eaf448a4baaf | p8@PAX2 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_1d5af8198c447f8eab00eaf448a4baaf | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_1d5af8198c447f8eab00eaf448a4baaf | p8@PAX2 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_1d5af8198c447f8eab00eaf448a4baaf | p@chr10:134535354..134535366, - |
| 3.11e-50 | FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_5719a248a924e4f7d590cbe1804ce1c8 | p19@PEMT |
| 3.11e-50 | FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_5719a248a924e4f7d590cbe1804ce1c8 | p19@PEMT |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_5fb320523044666460180810e3893946 | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_5fb320523044666460180810e3893946 | p10@PAX2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_5fb320523044666460180810e3893946 | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_5fb320523044666460180810e3893946 | p10@PAX2 |
| 8.98e-41 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_7857938fb2c2abcfe08ef3faeb528fa0 | p@chr17:171082..171101, + |
| 8.98e-41 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_7857938fb2c2abcfe08ef3faeb528fa0 | p@chr17:171082..171101, + |
| 1.1e-40 | FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_dfee509a579b84dd018478bf71178949 | p@chr3:172384246..172384250, + |
| 1.1e-40 | FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_dfee509a579b84dd018478bf71178949 | p@chr3:172384246..172384250, + |
| 1.64e-40 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_f6d1a6a6daca43308239b9f2182c0d07 | p@chr1:45087902..45087912, + |
| 1.64e-40 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_f6d1a6a6daca43308239b9f2182c0d07 | p@chr1:45087902..45087912, + |
| 3.68e-40 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_00672d63dc9ceeabf5c90d2c7a0e3a0b | p5@PAX2 |
| 3.68e-40 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_00672d63dc9ceeabf5c90d2c7a0e3a0b | p5@PAX2 |
| 8.2e-37 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_1061488252fc029c9e6afd638a7cecd3 | p6@PAX2 |
| 8.2e-37 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_1061488252fc029c9e6afd638a7cecd3 | p6@PAX2 |
| 9.84e-37 | FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_94c8e14e960d045740a8b3f14743ec04 | p3@CRB2 |
| 9.84e-37 | FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_94c8e14e960d045740a8b3f14743ec04 | p3@CRB2 |
| 6.0e-34 | FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_e24aacd98df7316268bffe3626d3343e | p@chr2:113984760..113984792, + |
| 6.0e-34 | FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_e24aacd98df7316268bffe3626d3343e | p@chr2:113984760..113984792, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_ea348f27daf96f08bffc891319d723ef | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:555661..555679,+#_ea348f27daf96f08bffc891319d723ef | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:858638..858648,+#_ea348f27daf96f08bffc891319d723ef | p@chr1:858638..858648, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_ea348f27daf96f08bffc891319d723ef | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:555661..555679,+#_ea348f27daf96f08bffc891319d723ef | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:858638..858648,+#_ea348f27daf96f08bffc891319d723ef | p@chr1:858638..858648, + |
| 8.39e-34 | FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_4d5e58cb4ae9024b4abae8f7ce9b4149 | p13@SPOCK2 |
| 8.39e-34 | FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_4d5e58cb4ae9024b4abae8f7ce9b4149 | p13@SPOCK2 |
| 1.17e-33 | FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_0465e956fdd81d80ad51e729e7405f76 | p25@PHLDB1 |
| 1.17e-33 | FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_0465e956fdd81d80ad51e729e7405f76 | p25@PHLDB1 |
| 3.35e-32 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_6f61e0c08fb8954546729a5f46341f64 | p@chr2:693362..693373, + |
| 3.35e-32 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_6f61e0c08fb8954546729a5f46341f64 | p@chr2:693362..693373, + |
| 2.54e-31 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_7fa7a12d71325c5f938ee6b1d2d8b37d | p1@RIPPLY1 |
| 2.54e-31 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_7fa7a12d71325c5f938ee6b1d2d8b37d | p1@RIPPLY1 |
| 8.05e-30 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_eec2b3e9f0026e0be84f1eeae24f4f9d | p@chr17:171147..171161, + |
| 8.05e-30 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_eec2b3e9f0026e0be84f1eeae24f4f9d | p@chr17:171147..171161, + |
| 2.96e-29 | FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_141b9a4d6890a3df511b4be4ea13c521 | p@chr2:165477405..165477418, - |
| 2.96e-29 | FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_141b9a4d6890a3df511b4be4ea13c521 | p@chr2:165477405..165477418, - |
| 4.55e-29 | FFCP PHASE1:Hg19::chr1:874109..874143,+#_7ddf47ad07831f9ea928895be2b2782c | p@chr1:874109..874143, + |
| 4.55e-29 | FFCP PHASE2:Hg19::chr1:874109..874143,+#_7ddf47ad07831f9ea928895be2b2782c | p@chr1:874109..874143, + |
| 1.43e-28 | FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_d58bceafd4f95f61a1bd837c8ab135cf | p@chr2:113999199..113999214, + |
| 1.43e-28 | FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_d58bceafd4f95f61a1bd837c8ab135cf | p@chr2:113999199..113999214, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_4438ea1e2828c912fdea900aa093bd59 | p@chr16:86604624..86604648, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_4438ea1e2828c912fdea900aa093bd59 | p7@LRRN4 |
| 1.83e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_4438ea1e2828c912fdea900aa093bd59 | p7@LRRN4 |
| 1.83e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_4438ea1e2828c912fdea900aa093bd59 | p@chr16:86604624..86604648, + |
| 2.74e-27 | FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_817f88717fe57f48bdc2fa18714668df | p@chr19:56091499..56091517, - |
| 2.74e-27 | FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_817f88717fe57f48bdc2fa18714668df | p@chr19:56091499..56091517, - |
| 2.78e-26 | FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_6abbf002bd69d6ba805585964874da23 | p@chr9:112260040..112260045, + |
| 2.78e-26 | FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_6abbf002bd69d6ba805585964874da23 | p@chr9:112260040..112260045, + |
| 4.63e-26 | FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_c6af5fe8eaba710d1bdf17d92511c48d | p@chr22:30645170..30645182, - |
| 4.63e-26 | FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_c6af5fe8eaba710d1bdf17d92511c48d | p@chr22:30645170..30645182, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_30e374179a12baefa167c9cc28435352 | p@chr8:22419319..22419327, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_30e374179a12baefa167c9cc28435352 | p@chr8:22419319..22419327, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p12@TRIM16 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_78d2f937c5cd5bb7e6c0e9c8148bb015 | p12@TRIM16 |
| 2.37e-25 | FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_443d7928525920e5592163319d7809f6 | p1@ENST00000523364, p1@uc010kux.1 |
| 2.37e-25 | FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_443d7928525920e5592163319d7809f6 | p1@ENST00000523364, p1@uc010kux.1 |
| 4.38e-25 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_de183a6cb3d4d56a2f874aff1afd90e8 | p16@HOXA10 |
| 4.38e-25 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_de183a6cb3d4d56a2f874aff1afd90e8 | p16@HOXA10 |
| 4.43e-25 | FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_bf762f179bf9e33195b38d5bb3a19e28 | p6@MTMR11 |
| 4.43e-25 | FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_bf762f179bf9e33195b38d5bb3a19e28 | p6@MTMR11 |
| 7.09e-25 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_a637de0d4c68f86fc61ba8616bd109b0 | p4@PAX2 |
| 7.09e-25 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_a637de0d4c68f86fc61ba8616bd109b0 | p4@PAX2 |
| 3.76e-24 | FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_51629a51291d3e487ac1c9b47844210f | p@chr1:46797583..46797614, - |
| 3.76e-24 | FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_51629a51291d3e487ac1c9b47844210f | p@chr1:46797583..46797614, - |
| 7.62e-24 | FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_2d4e1a28b1cf1fd196719910c4b99a87 | p@chr6:94129519..94129544, + |
| 7.62e-24 | FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_2d4e1a28b1cf1fd196719910c4b99a87 | p@chr6:94129519..94129544, + |
| 8.02e-24 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_6dfab2ffeaddd9416b6a45f95214dce2 | p@chr2:693380..693398, + |
| 8.02e-24 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_6dfab2ffeaddd9416b6a45f95214dce2 | p@chr2:693380..693398, + |
| 8.98e-24 | FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_4fbe083e01d15611c7e2fe10e10b6fcb | p@chr2:133426077..133426103, - |
| 8.98e-24 | FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_4fbe083e01d15611c7e2fe10e10b6fcb | p@chr2:133426077..133426103, - |
| 1.99e-23 | FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_6540604241831c59cf70921f88ace29b | p5@WT1-AS |
| 1.99e-23 | FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_6540604241831c59cf70921f88ace29b | p5@WT1-AS |
| 4.37e-23 | FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_c19e1b0bc304af62824cb1d409faf762 | p@chr2:176968471..176968476, - |
| 4.37e-23 | FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_c19e1b0bc304af62824cb1d409faf762 | p@chr2:176968471..176968476, - |
| 4.89e-23 | FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_7eaca8e9fd4cebcd70f6c1beafea4663 | p1@ENST00000469884 |
| 4.89e-23 | FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_7eaca8e9fd4cebcd70f6c1beafea4663 | p1@ENST00000469884 |
