FFCP PHASE1:Hg19::chr12:66357586..66357600,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!8.67e-11!254;CL:0002321!1.88e-10!248;CL:0000548!7.49e-10!679;CL:0000004!7.49e-10!679;CL:0000255!7.49e-10!679;CL:0000220!1.04e-09!246;CL:0000012!1.36e-09!682;CL:0000223!2.03e-08!59;CL:0002076!4.49e-08!43;CL:0002371!3.39e-07!591 | |ontology_enrichment_celltype=CL:0000066!8.67e-11!254;CL:0002321!1.88e-10!248;CL:0000548!7.49e-10!679;CL:0000004!7.49e-10!679;CL:0000255!7.49e-10!679;CL:0000220!1.04e-09!246;CL:0000012!1.36e-09!682;CL:0000223!2.03e-08!59;CL:0002076!4.49e-08!43;CL:0002371!3.39e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002573;1.48e-16;2!CL:0002336;4.76e-13;1!CL:0002261;4.76e-13;1!CL:0002170;4.76e-13;1!CL:0002588;3.69e-07;2!CL:0000243;7.84e-07;15!CL:0000125;7.84e-07;15 | |ontology_enrichment_celltype_v019=CL:0002573;1.48e-16;2!CL:0002336;4.76e-13;1!CL:0002261;4.76e-13;1!CL:0002170;4.76e-13;1!CL:0002588;3.69e-07;2!CL:0000243;7.84e-07;15!CL:0000125;7.84e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,7.30e-17,2;CL:0002336,1.09e-12,1;CL:0002261,1.09e-12,1;CL:0002170,1.09e-12,1;CL:0002588,4.17e-07,2;CL:0000243,6.55e-07,15;CL:0000125,6.55e-07,15;CL:0000030,6.55e-07,15;CL:0000339,6.55e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.76e-13;1!UBERON:0003852;4.76e-13;1!CL:0000339;7.84e-07;15 | |ontology_enrichment_development_v019=UBERON:0003099;4.76e-13;1!UBERON:0003852;4.76e-13;1!CL:0000339;7.84e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;3.69e-07;2!DOID:4468;3.69e-07;2 | |ontology_enrichment_disease_v019=DOID:1909;3.69e-07;2!DOID:4468;3.69e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,3.09e-07,2;DOID:1909,3.93e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;4.76e-13;1!UBERON:0008193;4.76e-13;1!UBERON:0010912;4.76e-13;1!UBERON:0002514;4.76e-13;1!UBERON:0003457;4.76e-13;1!UBERON:0008907;4.76e-13;1!UBERON:0008001;4.76e-13;1!UBERON:0007213;4.76e-13;1!UBERON:0009891;4.76e-13;1!UBERON:0007914;4.76e-13;1!UBERON:0007375;4.76e-13;1!UBERON:0003323;4.76e-13;1!UBERON:0010258;4.76e-13;1!UBERON:0005253;4.76e-13;1!UBERON:0007842;4.76e-13;1!UBERON:0002397;4.76e-13;1!UBERON:0003113;4.76e-13;1!UBERON:0003277;4.76e-13;1!UBERON:0001709;4.76e-13;1!UBERON:0002244;4.76e-13;1!UBERON:0005620;4.76e-13;1!UBERON:0010364;4.76e-13;1!UBERON:0004288;4.76e-13;1!UBERON:0004089;3.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005705;4.76e-13;1!UBERON:0008193;4.76e-13;1!UBERON:0010912;4.76e-13;1!UBERON:0002514;4.76e-13;1!UBERON:0003457;4.76e-13;1!UBERON:0008907;4.76e-13;1!UBERON:0008001;4.76e-13;1!UBERON:0007213;4.76e-13;1!UBERON:0009891;4.76e-13;1!UBERON:0007914;4.76e-13;1!UBERON:0007375;4.76e-13;1!UBERON:0003323;4.76e-13;1!UBERON:0010258;4.76e-13;1!UBERON:0005253;4.76e-13;1!UBERON:0007842;4.76e-13;1!UBERON:0002397;4.76e-13;1!UBERON:0003113;4.76e-13;1!UBERON:0003277;4.76e-13;1!UBERON:0001709;4.76e-13;1!UBERON:0002244;4.76e-13;1!UBERON:0005620;4.76e-13;1!UBERON:0010364;4.76e-13;1!UBERON:0004288;4.76e-13;1!UBERON:0004089;3.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,9.73e-13,1;UBERON:0008193,9.73e-13,1;UBERON:0010912,9.73e-13,1;UBERON:0002514,9.73e-13,1;UBERON:0003457,9.73e-13,1;UBERON:0008907,9.73e-13,1;UBERON:0008001,9.73e-13,1;UBERON:0007213,9.73e-13,1;UBERON:0009891,9.73e-13,1;UBERON:0007914,9.73e-13,1;UBERON:0009292,9.73e-13,1;UBERON:0003099,9.73e-13,1;UBERON:0007375,9.73e-13,1;UBERON:0003323,9.73e-13,1;UBERON:0010258,9.73e-13,1;UBERON:0007842,9.73e-13,1;UBERON:0009494,9.73e-13,1;UBERON:0010042,9.73e-13,1;UBERON:0010045,9.73e-13,1;UBERON:0010259,9.73e-13,1;UBERON:0010359,9.73e-13,1;UBERON:0009526,9.73e-13,1;UBERON:0002397,9.73e-13,1;UBERON:0003113,9.73e-13,1;UBERON:0003277,9.73e-13,1;UBERON:0001709,9.73e-13,1;UBERON:0004066,9.73e-13,1;UBERON:0002244,9.73e-13,1;UBERON:0005620,9.73e-13,1;UBERON:0004362,9.73e-13,1;UBERON:0010364,9.73e-13,1;UBERON:0010046,9.73e-13,1;UBERON:0005868,9.73e-13,1;UBERON:0007238,9.73e-13,1;UBERON:0004288,9.73e-13,1;UBERON:0004068,9.73e-13,1;UBERON:0010334,9.73e-13,1;UBERON:0003852,9.73e-13,1;UBERON:0010253,9.73e-13,1;UBERON:0005253,5.28e-07,2;UBERON:0004089,5.28e-07,2 | |||
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| ||
|short_description=p20@HMGA2 | |short_description=p20@HMGA2 | ||
}} | }} |
Revision as of 15:22, 18 November 2012
Short description: | p20@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_HMGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_AK311443_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 7.30e-17 | 2 |
buccal mucosa cell | 1.09e-12 | 1 |
endothelial cell of viscerocranial mucosa | 1.09e-12 | 1 |
keratinized cell of the oral mucosa | 1.09e-12 | 1 |
smooth muscle cell of the umbilical vein | 4.17e-07 | 2 |
glial cell (sensu Vertebrata) | 6.55e-07 | 15 |
glial cell | 6.55e-07 | 15 |
glioblast | 6.55e-07 | 15 |
glioblast (sensu Vertebrata) | 6.55e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.09e-07 | 2 |
melanoma | 3.93e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.