FFCP PHASE1:Hg19::chr6:83073074..83073093,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.89e-23!180;CL:0002620!9.90e-23!23;CL:0000057!1.12e-18!75;CL:0002551!4.21e-11!6;CL:0000034!3.35e-10!444;CL:0000048!3.14e-09!430;CL:0002334!7.12e-09!12;CL:0000723!8.23e-09!436;CL:0000188!1.77e-08!9;CL:0000187!6.66e-08!54;CL:0000393!1.63e-07!60;CL:0000211!1.63e-07!60;CL:0000680!3.21e-07!57;CL:0000056!3.21e-07!57;CL:0000355!3.21e-07!57;CL:0002582!8.11e-07!3;CL:0000183!8.30e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.89e-23!180;CL:0002620!9.90e-23!23;CL:0000057!1.12e-18!75;CL:0002551!4.21e-11!6;CL:0000034!3.35e-10!444;CL:0000048!3.14e-09!430;CL:0002334!7.12e-09!12;CL:0000723!8.23e-09!436;CL:0000188!1.77e-08!9;CL:0000187!6.66e-08!54;CL:0000393!1.63e-07!60;CL:0000211!1.63e-07!60;CL:0000680!3.21e-07!57;CL:0000056!3.21e-07!57;CL:0000355!3.21e-07!57;CL:0002582!8.11e-07!3;CL:0000183!8.30e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002582;2.26e-21;3!CL:0002583;1.77e-15;2!CL:0002334;1.55e-14;12!CL:0002551;8.76e-11;6!CL:0002570;3.28e-08;8!CL:0000048;4.79e-07;58 | |ontology_enrichment_celltype_v019=CL:0002582;2.26e-21;3!CL:0002583;1.77e-15;2!CL:0002334;1.55e-14;12!CL:0002551;8.76e-11;6!CL:0002570;3.28e-08;8!CL:0000048;4.79e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002582,3.11e-21,3;CL:0002583,1.91e-15,2;CL:0002334,1.82e-14,12;CL:0002551,9.39e-11,6;CL:0000057,1.00e-10,76;CL:0000048,6.83e-09,427;CL:0000723,1.06e-08,433;CL:0000034,1.88e-08,441;CL:0002570,3.82e-08,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.94e-18!14;DOID:193!3.43e-08!29;DOID:120!7.77e-08!27 | |ontology_enrichment_disease=DOID:2394!2.94e-18!14;DOID:193!3.43e-08!29;DOID:120!7.77e-08!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.90e-31;14!DOID:120;1.72e-15;27!DOID:193;2.40e-14;29!DOID:3571;3.82e-08;1 | |ontology_enrichment_disease_v019=DOID:2394;6.90e-31;14!DOID:120;1.72e-15;27!DOID:193;2.40e-14;29!DOID:3571;3.82e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.34e-31,14;DOID:120,1.19e-15,27;DOID:193,1.71e-14,29;DOID:3571,5.82e-08,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000992;1.59e-25;13!UBERON:0002118;4.17e-23;5!UBERON:0002119;6.69e-16;4!UBERON:0000991;1.67e-15;21!UBERON:0003134;9.81e-09;33!UBERON:0002067;2.39e-07;9!UBERON:0003100;8.25e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0000992;1.59e-25;13!UBERON:0002118;4.17e-23;5!UBERON:0002119;6.69e-16;4!UBERON:0000991;1.67e-15;21!UBERON:0003134;9.81e-09;33!UBERON:0002067;2.39e-07;9!UBERON:0003100;8.25e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,8.83e-26,13;UBERON:0002118,4.96e-23,5;UBERON:0002119,2.51e-16,4;UBERON:0000991,1.17e-15,21;UBERON:0009196,1.17e-15,21;UBERON:0009117,1.17e-15,21;UBERON:0005564,1.17e-15,21;UBERON:0004176,6.57e-15,22;UBERON:0003134,1.59e-08,37;UBERON:0000474,1.59e-08,37;UBERON:0003100,1.31e-07,41;UBERON:0002067,2.50e-07,9;UBERON:0004016,2.50e-07,9;UBERON:0010083,2.50e-07,9 | |||
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| ||
|short_description=p15@TPBG | |short_description=p15@TPBG | ||
}} | }} |
Revision as of 23:27, 18 November 2012
Short description: | p15@TPBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_TPBG_5end |
Coexpression cluster: | C4630_mesenchymal_Smooth_Adipocyte_Fibroblast_Preadipocyte_Skeletal_Sertoli |
Association with transcript: | 151bp_to_ENST00000535040, NM_006670, uc003pjn.3_5end |
EntrezGene: | TPBG |
HGNC: | 12004 |
UniProt: | A8K555Q13641 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 3.11e-21 | 3 |
subcutaneous preadipocyte | 1.91e-15 | 2 |
preadipocyte | 1.82e-14 | 12 |
fibroblast of dermis | 9.39e-11 | 6 |
fibroblast | 1.00e-10 | 76 |
multi fate stem cell | 6.83e-09 | 427 |
somatic stem cell | 1.06e-08 | 433 |
stem cell | 1.88e-08 | 441 |
mesenchymal stem cell of adipose | 3.82e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
female gonad | 8.83e-26 | 13 |
right ovary | 4.96e-23 | 5 |
left ovary | 2.51e-16 | 4 |
gonad | 1.17e-15 | 21 |
indifferent external genitalia | 1.17e-15 | 21 |
indifferent gonad | 1.17e-15 | 21 |
gonad primordium | 1.17e-15 | 21 |
external genitalia | 6.57e-15 | 22 |
female reproductive organ | 1.59e-08 | 37 |
female reproductive system | 1.59e-08 | 37 |
female organism | 1.31e-07 | 41 |
dermis | 2.50e-07 | 9 |
dermatome | 2.50e-07 | 9 |
future dermis | 2.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.34e-31 | 14 |
female reproductive organ cancer | 1.19e-15 | 27 |
reproductive organ cancer | 1.71e-14 | 29 |
liver cancer | 5.82e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.