FFCP PHASE1:Hg19::chr4:74486279..74486297,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.50e-12!254;CL:0002076!2.02e-11!43;CL:0000223!1.79e-09!59;CL:0002251!2.94e-08!21;CL:0000945!7.24e-08!24;CL:0000826!7.24e-08!24 | |ontology_enrichment_celltype=CL:0000066!1.50e-12!254;CL:0002076!2.02e-11!43;CL:0000223!1.79e-09!59;CL:0002251!2.94e-08!21;CL:0000945!7.24e-08!24;CL:0000826!7.24e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.68e-08;42!CL:0000244;5.21e-08;4!CL:0000731;5.21e-08;4 | |ontology_enrichment_celltype_v019=CL:0002076;4.68e-08;42!CL:0000244;5.21e-08;4!CL:0000731;5.21e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.36e-08,42;CL:0000244,5.61e-08,4;CL:0000731,5.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006595;5.89e-07;86 | |ontology_enrichment_development_v019=UBERON:0006595;5.89e-07;86 | ||
|ontology_enrichment_disease=DOID:305!1.69e-08!106;DOID:1749!2.93e-08!14 | |ontology_enrichment_disease=DOID:305!1.69e-08!106;DOID:1749!2.93e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.17e-08;10 | |ontology_enrichment_disease_v019=DOID:0060058;1.17e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.23e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.73e-17!169;UBERON:0000925!4.73e-17!169;UBERON:0006595!4.73e-17!169;UBERON:0001007!1.31e-12!155;UBERON:0001555!1.31e-12!155;UBERON:0007026!1.31e-12!155;UBERON:0004921!1.08e-10!129;UBERON:0004185!1.08e-10!129;UBERON:0001004!1.10e-10!72;UBERON:0000161!2.75e-08!35;UBERON:0001444!3.33e-08!48;UBERON:0000344!1.71e-07!12;UBERON:0000365!2.84e-07!5;UBERON:0000166!3.55e-07!21;UBERON:0005911!6.28e-07!82;UBERON:0000077!6.93e-07!130 | |ontology_enrichment_uberon=UBERON:0004119!4.73e-17!169;UBERON:0000925!4.73e-17!169;UBERON:0006595!4.73e-17!169;UBERON:0001007!1.31e-12!155;UBERON:0001555!1.31e-12!155;UBERON:0007026!1.31e-12!155;UBERON:0004921!1.08e-10!129;UBERON:0004185!1.08e-10!129;UBERON:0001004!1.10e-10!72;UBERON:0000161!2.75e-08!35;UBERON:0001444!3.33e-08!48;UBERON:0000344!1.71e-07!12;UBERON:0000365!2.84e-07!5;UBERON:0000166!3.55e-07!21;UBERON:0005911!6.28e-07!82;UBERON:0000077!6.93e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.28e-13;33!UBERON:0005409;6.93e-12;22!UBERON:0002108;1.58e-10;4!UBERON:0000160;6.50e-10;17!UBERON:0001555;4.56e-08;54!UBERON:0002370;5.43e-08;2!UBERON:0005058;5.43e-08;2!UBERON:0009113;5.43e-08;2!UBERON:0006562;2.48e-07;2!UBERON:0003127;6.85e-07;2!UBERON:0000161;7.03e-07;19!UBERON:0000166;7.03e-07;19!UBERON:0004177;9.21e-07;5!UBERON:0005057;9.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0004921;3.28e-13;33!UBERON:0005409;6.93e-12;22!UBERON:0002108;1.58e-10;4!UBERON:0000160;6.50e-10;17!UBERON:0001555;4.56e-08;54!UBERON:0002370;5.43e-08;2!UBERON:0005058;5.43e-08;2!UBERON:0009113;5.43e-08;2!UBERON:0006562;2.48e-07;2!UBERON:0003127;6.85e-07;2!UBERON:0000161;7.03e-07;19!UBERON:0000166;7.03e-07;19!UBERON:0004177;9.21e-07;5!UBERON:0005057;9.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.87e-20,160;UBERON:0000925,5.87e-20,160;UBERON:0006595,5.87e-20,160;UBERON:0001007,1.00e-13,145;UBERON:0001555,1.00e-13,145;UBERON:0007026,1.00e-13,145;UBERON:0005409,1.35e-12,25;UBERON:0004921,2.33e-12,118;UBERON:0002108,2.90e-10,4;UBERON:0000160,6.29e-10,17;UBERON:0001004,3.09e-09,74;UBERON:0003127,3.81e-07,2 | |||
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| ||
|short_description=p5@RASSF6 | |short_description=p5@RASSF6 | ||
}} | }} |
Revision as of 20:40, 19 November 2012
Short description: | p5@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | -14bp_to_ENST00000307439_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.36e-08 | 42 |
transitional epithelial cell | 5.61e-08 | 4 |
urothelial cell | 5.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.87e-20 | 160 |
endoderm | 5.87e-20 | 160 |
presumptive endoderm | 5.87e-20 | 160 |
digestive system | 1.00e-13 | 145 |
digestive tract | 1.00e-13 | 145 |
primitive gut | 1.00e-13 | 145 |
gastrointestinal system | 1.35e-12 | 25 |
subdivision of digestive tract | 2.33e-12 | 118 |
small intestine | 2.90e-10 | 4 |
intestine | 6.29e-10 | 17 |
respiratory system | 3.09e-09 | 74 |
open tracheal system trachea | 3.81e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.23e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.