FFCP PHASE1:Mm9::chr1:42752124..42752135,-: Difference between revisions
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|id=chr1:42752124..42752135,- | |id=chr1:42752124..42752135,- | ||
|ontology_enrichment_celltype=CL:0000221!1.10e-09!44;CL:0000133!1.10e-09!44;CL:0002609!1.20e-09!6;CL:0000117!2.86e-09!23;CL:0000337!2.86e-09!23;CL:0002319!6.00e-09!43;CL:0000540!2.88e-08!33;CL:0000047!2.88e-08!33;CL:0000031!2.88e-08!33;CL:0000404!2.88e-08!33;CL:0000055!7.40e-07!50 | |ontology_enrichment_celltype=CL:0000221!1.10e-09!44;CL:0000133!1.10e-09!44;CL:0002609!1.20e-09!6;CL:0000117!2.86e-09!23;CL:0000337!2.86e-09!23;CL:0002319!6.00e-09!43;CL:0000540!2.88e-08!33;CL:0000047!2.88e-08!33;CL:0000031!2.88e-08!33;CL:0000404!2.88e-08!33;CL:0000055!7.40e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.47e-38,6;CL:0000117,6.64e-22,23;CL:0000337,6.64e-22,23;CL:0000120,5.37e-20,3;CL:0002608,8.33e-20,3;CL:0000540,1.83e-18,33;CL:0000047,1.83e-18,33;CL:0000031,1.83e-18,33;CL:0000404,1.83e-18,33;CL:0002319,8.13e-17,43;CL:0000221,2.09e-16,44;CL:0000133,2.09e-16,44;CL:0000393,1.84e-15,39;CL:0000211,1.84e-15,39;CL:0002321,7.52e-10,70;CL:0002374,2.05e-07,1;CL:0000202,2.05e-07,1;CL:0000199,2.05e-07,1;CL:0000855,2.05e-07,1;CL:0000589,2.05e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.55e-10!73;UBERON:0005743!2.55e-10!73;UBERON:0000956!3.16e-10!21;UBERON:0001869!3.16e-10!21;UBERON:0000203!3.16e-10!21;UBERON:0002020!7.06e-10!34;UBERON:0000073!8.49e-10!75;UBERON:0001016!8.49e-10!75;UBERON:0002791!8.80e-10!29;UBERON:0003528!8.80e-10!29;UBERON:0001893!8.80e-10!29;UBERON:0000033!2.64e-09!63;UBERON:0003056!1.28e-08!49;UBERON:0004121!3.19e-08!102;UBERON:0000924!3.19e-08!102;UBERON:0006601!3.19e-08!102;UBERON:0002346!5.80e-08!71;UBERON:0003075!5.80e-08!71;UBERON:0007284!5.80e-08!71;UBERON:0002780!1.20e-07!39;UBERON:0001890!1.20e-07!39;UBERON:0006240!1.20e-07!39;UBERON:0001049!1.82e-07!52;UBERON:0005068!1.82e-07!52;UBERON:0006241!1.82e-07!52;UBERON:0007135!1.82e-07!52;UBERON:0002616!2.12e-07!49;UBERON:0003080!2.53e-07!40;UBERON:0000955!3.92e-07!50;UBERON:0006238!3.92e-07!50;UBERON:0001954!6.37e-07!7;UBERON:0003022!6.37e-07!7;UBERON:0002421!6.37e-07!7;UBERON:0000349!6.37e-07!7;UBERON:0002600!6.37e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!2.55e-10!73;UBERON:0005743!2.55e-10!73;UBERON:0000956!3.16e-10!21;UBERON:0001869!3.16e-10!21;UBERON:0000203!3.16e-10!21;UBERON:0002020!7.06e-10!34;UBERON:0000073!8.49e-10!75;UBERON:0001016!8.49e-10!75;UBERON:0002791!8.80e-10!29;UBERON:0003528!8.80e-10!29;UBERON:0001893!8.80e-10!29;UBERON:0000033!2.64e-09!63;UBERON:0003056!1.28e-08!49;UBERON:0004121!3.19e-08!102;UBERON:0000924!3.19e-08!102;UBERON:0006601!3.19e-08!102;UBERON:0002346!5.80e-08!71;UBERON:0003075!5.80e-08!71;UBERON:0007284!5.80e-08!71;UBERON:0002780!1.20e-07!39;UBERON:0001890!1.20e-07!39;UBERON:0006240!1.20e-07!39;UBERON:0001049!1.82e-07!52;UBERON:0005068!1.82e-07!52;UBERON:0006241!1.82e-07!52;UBERON:0007135!1.82e-07!52;UBERON:0002616!2.12e-07!49;UBERON:0003080!2.53e-07!40;UBERON:0000955!3.92e-07!50;UBERON:0006238!3.92e-07!50;UBERON:0001954!6.37e-07!7;UBERON:0003022!6.37e-07!7;UBERON:0002421!6.37e-07!7;UBERON:0000349!6.37e-07!7;UBERON:0002600!6.37e-07!7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.02e-14,7;UBERON:0003022,1.02e-14,7;UBERON:0002421,1.02e-14,7;UBERON:0000349,1.02e-14,7;UBERON:0002600,1.02e-14,7;UBERON:0000956,1.76e-14,21;UBERON:0001869,1.76e-14,21;UBERON:0000203,1.76e-14,21;UBERON:0001017,2.45e-13,73;UBERON:0003528,2.46e-13,29;UBERON:0002791,2.46e-13,29;UBERON:0001893,2.46e-13,29;UBERON:0001016,6.06e-13,75;UBERON:0002020,2.91e-11,34;UBERON:0002616,3.25e-10,46;UBERON:0000955,5.63e-10,47;UBERON:0006238,5.63e-10,47;UBERON:0004121,6.48e-10,95;UBERON:0000924,6.48e-10,95;UBERON:0006601,6.48e-10,95;UBERON:0002780,1.02e-09,39;UBERON:0001890,1.02e-09,39;UBERON:0006240,1.02e-09,39;UBERON:0003080,1.86e-09,40;UBERON:0001049,6.38e-09,52;UBERON:0005068,6.38e-09,52;UBERON:0006241,6.38e-09,52;UBERON:0007135,6.38e-09,52;UBERON:0000073,1.49e-08,54;UBERON:0003056,1.44e-07,49;UBERON:0010371,1.56e-07,73;UBERON:0002346,4.66e-07,64;UBERON:0003075,4.66e-07,64;UBERON:0007284,4.66e-07,64 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,1.90149421051854,0,0,0,0,0,0.299600110518405,0.768436610643109,2.69592992002042,3.51015439662396,3.15487442027073,0,0,2.08234358665422,2.01275489138296,2.75765635983006,0,0,0.307213066512487,0.131886287730194,0.548925861614458,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0.173824320192276,0,0.20778804455956,0,0,0,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0,0,0,0.93408612825759,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0,0.206035057238894,0.962757628775446,0.505394423527595,0,0.754505365544305,0.280924522409647,0.128050304809739,0.0574354689556133,0.476293691283074,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.29551344712669,0,0.154936841185966,0.192906610981141,1.49886346762768,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,1.90149421051854,0,0,0,0,0,0.299600110518405,0.768436610643109,2.69592992002042,3.51015439662396,3.15487442027073,0,0,2.08234358665422,2.01275489138296,2.75765635983006,0,0,0.307213066512487,0.131886287730194,0.548925861614458,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0.173824320192276,0,0.20778804455956,0,0,0,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0,0,0,0.93408612825759,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0,0.206035057238894,0.962757628775446,0.505394423527595,0,0.754505365544305,0.280924522409647,0.128050304809739,0.0574354689556133,0.476293691283074,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.29551344712669,0,0.154936841185966,0.192906610981141,1.49886346762768,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p8@2610017I09Rik | |short_description=p8@2610017I09Rik | ||
}} | }} |
Revision as of 19:17, 14 November 2012
Short description: | p8@2610017I09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_2610017I09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | -454bp_to_NR_027826, uc007auu.1, uc007auv.1_5end |
EntrezGene: | 2610017I09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.47e-38 | 6 |
CNS neuron (sensu Vertebrata) | 6.64e-22 | 23 |
neuroblast (sensu Vertebrata) | 6.64e-22 | 23 |
granule cell | 5.37e-20 | 3 |
hippocampal neuron | 8.33e-20 | 3 |
neuron | 1.83e-18 | 33 |
neuronal stem cell | 1.83e-18 | 33 |
neuroblast | 1.83e-18 | 33 |
electrically signaling cell | 1.83e-18 | 33 |
neural cell | 8.13e-17 | 43 |
ectodermal cell | 2.09e-16 | 44 |
neurectodermal cell | 2.09e-16 | 44 |
electrically responsive cell | 1.84e-15 | 39 |
electrically active cell | 1.84e-15 | 39 |
embryonic cell | 7.52e-10 | 70 |
ear hair cell | 2.05e-07 | 1 |
auditory hair cell | 2.05e-07 | 1 |
mechanoreceptor cell | 2.05e-07 | 1 |
sensory hair cell | 2.05e-07 | 1 |
cochlear inner hair cell | 2.05e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.02e-14 | 7 |
lobe parts of cerebral cortex | 1.02e-14 | 7 |
hippocampal formation | 1.02e-14 | 7 |
limbic system | 1.02e-14 | 7 |
limbic lobe | 1.02e-14 | 7 |
cerebral cortex | 1.76e-14 | 21 |
cerebral hemisphere | 1.76e-14 | 21 |
pallium | 1.76e-14 | 21 |
central nervous system | 2.45e-13 | 73 |
brain grey matter | 2.46e-13 | 29 |
regional part of telencephalon | 2.46e-13 | 29 |
telencephalon | 2.46e-13 | 29 |
nervous system | 6.06e-13 | 75 |
gray matter | 2.91e-11 | 34 |
regional part of brain | 3.25e-10 | 46 |
brain | 5.63e-10 | 47 |
future brain | 5.63e-10 | 47 |
ectoderm-derived structure | 6.48e-10 | 95 |
ectoderm | 6.48e-10 | 95 |
presumptive ectoderm | 6.48e-10 | 95 |
regional part of forebrain | 1.02e-09 | 39 |
forebrain | 1.02e-09 | 39 |
future forebrain | 1.02e-09 | 39 |
anterior neural tube | 1.86e-09 | 40 |
neural tube | 6.38e-09 | 52 |
neural rod | 6.38e-09 | 52 |
future spinal cord | 6.38e-09 | 52 |
neural keel | 6.38e-09 | 52 |
regional part of nervous system | 1.49e-08 | 54 |
pre-chordal neural plate | 1.44e-07 | 49 |
ecto-epithelium | 1.56e-07 | 73 |
neurectoderm | 4.66e-07 | 64 |
neural plate | 4.66e-07 | 64 |
presumptive neural plate | 4.66e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.