Personal tools

FFCP PHASE1:Mm9::chr7:54387680..54387758,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr7:54387680..54387758,-
|id=chr7:54387680..54387758,-
|ontology_enrichment_celltype=CL:0000117!2.44e-15!23;CL:0000337!2.44e-15!23;CL:0000393!1.65e-09!39;CL:0000211!1.65e-09!39;CL:0000540!7.17e-09!33;CL:0000047!7.17e-09!33;CL:0000031!7.17e-09!33;CL:0000404!7.17e-09!33
|ontology_enrichment_celltype=CL:0000117!2.44e-15!23;CL:0000337!2.44e-15!23;CL:0000393!1.65e-09!39;CL:0000211!1.65e-09!39;CL:0000540!7.17e-09!33;CL:0000047!7.17e-09!33;CL:0000031!7.17e-09!33;CL:0000404!7.17e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-20,23;CL:0000337,4.63e-20,23;CL:0000540,1.79e-11,33;CL:0000047,1.79e-11,33;CL:0000031,1.79e-11,33;CL:0000404,1.79e-11,33;CL:0000393,4.32e-11,39;CL:0000211,4.32e-11,39;CL:0002319,1.05e-07,43;CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.28e-22!52;UBERON:0005068!6.28e-22!52;UBERON:0006241!6.28e-22!52;UBERON:0007135!6.28e-22!52;UBERON:0000033!3.21e-21!63;UBERON:0002020!6.07e-21!34;UBERON:0002346!1.05e-20!71;UBERON:0003075!1.05e-20!71;UBERON:0007284!1.05e-20!71;UBERON:0000955!1.23e-20!50;UBERON:0006238!1.23e-20!50;UBERON:0002616!5.65e-20!49;UBERON:0000073!1.15e-19!75;UBERON:0001016!1.15e-19!75;UBERON:0001017!2.07e-19!73;UBERON:0005743!2.07e-19!73;UBERON:0003056!1.55e-18!49;UBERON:0002791!1.86e-17!29;UBERON:0003528!1.86e-17!29;UBERON:0001893!1.86e-17!29;UBERON:0003080!5.12e-17!40;UBERON:0004121!9.17e-17!102;UBERON:0000924!9.17e-17!102;UBERON:0006601!9.17e-17!102;UBERON:0002780!2.63e-16!39;UBERON:0001890!2.63e-16!39;UBERON:0006240!2.63e-16!39;UBERON:0000956!3.39e-12!21;UBERON:0001869!3.39e-12!21;UBERON:0000203!3.39e-12!21;UBERON:0002619!5.93e-10!17;UBERON:0007811!1.01e-09!86;UBERON:0002021!1.52e-09!10;UBERON:0000411!1.52e-09!10;UBERON:0001950!1.52e-09!10;UBERON:0000153!2.50e-07!94;UBERON:0000025!3.01e-07!114;UBERON:0004111!5.43e-07!122
|ontology_enrichment_uberon=UBERON:0001049!6.28e-22!52;UBERON:0005068!6.28e-22!52;UBERON:0006241!6.28e-22!52;UBERON:0007135!6.28e-22!52;UBERON:0000033!3.21e-21!63;UBERON:0002020!6.07e-21!34;UBERON:0002346!1.05e-20!71;UBERON:0003075!1.05e-20!71;UBERON:0007284!1.05e-20!71;UBERON:0000955!1.23e-20!50;UBERON:0006238!1.23e-20!50;UBERON:0002616!5.65e-20!49;UBERON:0000073!1.15e-19!75;UBERON:0001016!1.15e-19!75;UBERON:0001017!2.07e-19!73;UBERON:0005743!2.07e-19!73;UBERON:0003056!1.55e-18!49;UBERON:0002791!1.86e-17!29;UBERON:0003528!1.86e-17!29;UBERON:0001893!1.86e-17!29;UBERON:0003080!5.12e-17!40;UBERON:0004121!9.17e-17!102;UBERON:0000924!9.17e-17!102;UBERON:0006601!9.17e-17!102;UBERON:0002780!2.63e-16!39;UBERON:0001890!2.63e-16!39;UBERON:0006240!2.63e-16!39;UBERON:0000956!3.39e-12!21;UBERON:0001869!3.39e-12!21;UBERON:0000203!3.39e-12!21;UBERON:0002619!5.93e-10!17;UBERON:0007811!1.01e-09!86;UBERON:0002021!1.52e-09!10;UBERON:0000411!1.52e-09!10;UBERON:0001950!1.52e-09!10;UBERON:0000153!2.50e-07!94;UBERON:0000025!3.01e-07!114;UBERON:0004111!5.43e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.07e-28,34;UBERON:0000073,5.62e-28,54;UBERON:0001049,6.28e-26,52;UBERON:0005068,6.28e-26,52;UBERON:0006241,6.28e-26,52;UBERON:0007135,6.28e-26,52;UBERON:0001017,8.08e-24,73;UBERON:0003528,1.58e-23,29;UBERON:0002791,1.58e-23,29;UBERON:0001893,1.58e-23,29;UBERON:0001016,1.03e-22,75;UBERON:0002346,5.72e-22,64;UBERON:0003075,5.72e-22,64;UBERON:0007284,5.72e-22,64;UBERON:0000955,2.33e-21,47;UBERON:0006238,2.33e-21,47;UBERON:0002616,1.60e-20,46;UBERON:0003080,6.24e-19,40;UBERON:0002780,5.06e-18,39;UBERON:0001890,5.06e-18,39;UBERON:0006240,5.06e-18,39;UBERON:0010371,2.50e-17,73;UBERON:0004121,3.54e-17,95;UBERON:0000924,3.54e-17,95;UBERON:0006601,3.54e-17,95;UBERON:0003056,5.67e-17,49;UBERON:0000956,1.98e-16,21;UBERON:0001869,1.98e-16,21;UBERON:0000203,1.98e-16,21;UBERON:0002619,2.07e-13,17;UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0010314,2.40e-11,92;UBERON:0002420,3.14e-08,8;UBERON:0007245,3.14e-08,8;UBERON:0010009,3.14e-08,8;UBERON:0010011,3.14e-08,8;UBERON:0000454,3.14e-08,8;UBERON:0003076,1.55e-07,12;UBERON:0003057,1.55e-07,12;UBERON:0000025,1.95e-07,114;UBERON:0002240,9.85e-07,6;UBERON:0005174,9.85e-07,6;UBERON:0001137,9.85e-07,6
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0.198581902401771,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.377690453926732,1.21652317463417,3.67093504323363,0,0,0,0,0,0,0,0,0,0,0.573066879877513,2.06268836910977,25.4918740683093,29.6234948392338,27.2547503507657,0,0,0,0,0,1.19840044207362,0,4.04389488003063,5.67024940993101,4.6271491497304,49.1319693174542,46.8241306817421,5.87955836231779,5.65488279007595,11.9498442259303,62.7660521696516,76.867777527283,71.7342510306657,26.2453712583086,29.5505088835783,23.4411016750542,50.5321228192499,33.7657566019008,46.6034655719271,47.1405736757868,38.5827254965569,30.1967102236987,0.151452386666368,0.982430281388212,0.289864488701678,0,0,0,0,0,3.65155492342555,0,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.253359865475099,0,2.05530983494308,0,0,0,0.913396434936424,0.230615497256059,0.753613202763113,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,5.85561594023094,3.97948742945565,0,0.11981512450592,0,0,54.3740021039506,178.425235099264,23.6230181972185,142.883591198051,87.454686406973,84.9853102248601,75.6044285895751,0.101839363850316,6.09594155989456,44.7319282427604,0.210441855886474,0.260240885925407,0.459804208866946,0.720248519221397,0.90422890701429,1.36072998302656,1.5373646434182,1.3118241438362,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.0645296828303,20.8896363129947,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,1.26108115284953,0.664394068946325,0.797273843287435,0,0.172684981865896,0,0,0,0,0,42.7064569367527,42.1962071731931,0,0,0,0,0,0,0,0,0,0.292255857911312,0,31.8108103257589,1.27746076687442,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0,0,0,0,0,0,48.396003824743,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0.747582730219894,0,0.583353565032143,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,3.11357761254351,2.57242054894879,0,128.198668274074,131.192692404545,124.891221929788,109.814183517616,144.552411671606,178.272959783969,159.980332554938,203.995505060572,206.179796087813,226.779016547297,0.31136204275253,2.79317411380722,2.73173769206615,1.45864030240976,2.93458427679175,2.38996560985018,4.4449345560323,2.26638562962784,4.81378814387723,3.79045817645696,3.04175159868288,3.77252682772152,2.71560371662659,2.75308155340938,2.5845961030026,2.85776214769844,3.24476112645595,2.89363830695558,1.23625770240992,2.94397840268795,5.48590803816665,1.95223386775271,2.38436189947321,2.61623549938191,3.10560955370591,2.70766745253365,3.65855945745545,2.36762740294059,1.90125759384206,1.12228454331548,2.01679530811096,2.85662998889134,3.6830793885272,2.16911577660352,3.47231899766054,7.24450676020043,4.21076895201735,3.43793686477277,2.29545998482612,1.76473135295612,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0.198581902401771,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.377690453926732,1.21652317463417,3.67093504323363,0,0,0,0,0,0,0,0,0,0,0.573066879877513,2.06268836910977,25.4918740683093,29.6234948392338,27.2547503507657,0,0,0,0,0,1.19840044207362,0,4.04389488003063,5.67024940993101,4.6271491497304,49.1319693174542,46.8241306817421,5.87955836231779,5.65488279007595,11.9498442259303,62.7660521696516,76.867777527283,71.7342510306657,26.2453712583086,29.5505088835783,23.4411016750542,50.5321228192499,33.7657566019008,46.6034655719271,47.1405736757868,38.5827254965569,30.1967102236987,0.151452386666368,0.982430281388212,0.289864488701678,0,0,0,0,0,3.65155492342555,0,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.253359865475099,0,2.05530983494308,0,0,0,0.913396434936424,0.230615497256059,0.753613202763113,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,5.85561594023094,3.97948742945565,0,0.11981512450592,0,0,54.3740021039506,178.425235099264,23.6230181972185,142.883591198051,87.454686406973,84.9853102248601,75.6044285895751,0.101839363850316,6.09594155989456,44.7319282427604,0.210441855886474,0.260240885925407,0.459804208866946,0.720248519221397,0.90422890701429,1.36072998302656,1.5373646434182,1.3118241438362,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.0645296828303,20.8896363129947,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,1.26108115284953,0.664394068946325,0.797273843287435,0,0.172684981865896,0,0,0,0,0,42.7064569367527,42.1962071731931,0,0,0,0,0,0,0,0,0,0.292255857911312,0,31.8108103257589,1.27746076687442,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0,0,0,0,0,0,48.396003824743,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0.747582730219894,0,0.583353565032143,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,3.11357761254351,2.57242054894879,0,128.198668274074,131.192692404545,124.891221929788,109.814183517616,144.552411671606,178.272959783969,159.980332554938,203.995505060572,206.179796087813,226.779016547297,0.31136204275253,2.79317411380722,2.73173769206615,1.45864030240976,2.93458427679175,2.38996560985018,4.4449345560323,2.26638562962784,4.81378814387723,3.79045817645696,3.04175159868288,3.77252682772152,2.71560371662659,2.75308155340938,2.5845961030026,2.85776214769844,3.24476112645595,2.89363830695558,1.23625770240992,2.94397840268795,5.48590803816665,1.95223386775271,2.38436189947321,2.61623549938191,3.10560955370591,2.70766745253365,3.65855945745545,2.36762740294059,1.90125759384206,1.12228454331548,2.01679530811096,2.85662998889134,3.6830793885272,2.16911577660352,3.47231899766054,7.24450676020043,4.21076895201735,3.43793686477277,2.29545998482612,1.76473135295612,0.463735671240843
|short_description=p1@Ptpn5
|short_description=p1@Ptpn5
}}
}}

Revision as of 11:25, 13 November 2012

Short description:p1@Ptpn5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ptpn5_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000126370_5end
EntrezGene:Ptpn5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ptpn5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C325.49
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F149.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D546.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D362.77
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F376.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D771.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E450.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I646.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.58
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A454.37
corpus striatum, adult.CNhs10487.19-21D8178.43
corpus striatum, neonate N00.CNhs11226.630-43F123.62
cortex, adult.CNhs10473.12-14D5142.88
cortex, neonate N30.CNhs11107.1392-42F287.45
diencephalon, adult.CNhs10482.20-12F284.99
diencephalon, neonate N30.CNhs11201.1388-42B275.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B244.73
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E883.06
hippocampus, neonate N00.CNhs11228.627-43G120.89
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C242.71
medulla oblongata, neonate N30.CNhs11200.1396-42A342.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I931.81
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C948.40
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1128.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2131.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3124.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7109.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4144.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5178.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6159.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7204.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8206.18
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9226.78
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.63e-2023
neuroblast (sensu Vertebrata)4.63e-2023
neuron1.79e-1133
neuronal stem cell1.79e-1133
neuroblast1.79e-1133
electrically signaling cell1.79e-1133
electrically responsive cell4.32e-1139
electrically active cell4.32e-1139
neural cell1.05e-0743
ectodermal cell2.28e-0744
neurectodermal cell2.28e-0744

Uber anatomy
Ontology termp-valuen
gray matter3.07e-2834
regional part of nervous system5.62e-2854
neural tube6.28e-2652
neural rod6.28e-2652
future spinal cord6.28e-2652
neural keel6.28e-2652
central nervous system8.08e-2473
brain grey matter1.58e-2329
regional part of telencephalon1.58e-2329
telencephalon1.58e-2329
nervous system1.03e-2275
neurectoderm5.72e-2264
neural plate5.72e-2264
presumptive neural plate5.72e-2264
brain2.33e-2147
future brain2.33e-2147
regional part of brain1.60e-2046
anterior neural tube6.24e-1940
regional part of forebrain5.06e-1839
forebrain5.06e-1839
future forebrain5.06e-1839
ecto-epithelium2.50e-1773
ectoderm-derived structure3.54e-1795
ectoderm3.54e-1795
presumptive ectoderm3.54e-1795
pre-chordal neural plate5.67e-1749
cerebral cortex1.98e-1621
cerebral hemisphere1.98e-1621
pallium1.98e-1621
regional part of cerebral cortex2.07e-1317
occipital lobe2.79e-1210
visual cortex2.79e-1210
neocortex2.79e-1210
structure with developmental contribution from neural crest2.40e-1192
basal ganglion3.14e-088
nuclear complex of neuraxis3.14e-088
aggregate regional part of brain3.14e-088
collection of basal ganglia3.14e-088
cerebral subcortex3.14e-088
posterior neural tube1.55e-0712
chordal neural plate1.55e-0712
tube1.95e-07114
spinal cord9.85e-076
dorsal region element9.85e-076
dorsum9.85e-076







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:54387680..54387758,-&oldid=2251998"