FFCP PHASE1:Mm9::chr5:113006206..113006224,-: Difference between revisions
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|id=chr5:113006206..113006224,- | |id=chr5:113006206..113006224,- | ||
|ontology_enrichment_celltype=CL:0000117!4.59e-14!23;CL:0000337!4.59e-14!23;CL:0000540!4.79e-10!33;CL:0000047!4.79e-10!33;CL:0000031!4.79e-10!33;CL:0000404!4.79e-10!33;CL:0000221!1.98e-09!44;CL:0000133!1.98e-09!44;CL:0002319!3.02e-09!43 | |ontology_enrichment_celltype=CL:0000117!4.59e-14!23;CL:0000337!4.59e-14!23;CL:0000540!4.79e-10!33;CL:0000047!4.79e-10!33;CL:0000031!4.79e-10!33;CL:0000404!4.79e-10!33;CL:0000221!1.98e-09!44;CL:0000133!1.98e-09!44;CL:0002319!3.02e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.68e-16,23;CL:0000337,9.68e-16,23;CL:0000540,1.06e-10,33;CL:0000047,1.06e-10,33;CL:0000031,1.06e-10,33;CL:0000404,1.06e-10,33;CL:0000221,4.27e-09,44;CL:0000133,4.27e-09,44;CL:0002319,6.84e-09,43;CL:0000393,9.50e-08,39;CL:0000211,9.50e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@Sez6l | |short_description=p1@Sez6l | ||
}} | }} |
Revision as of 11:22, 14 November 2012
Short description: | p1@Sez6l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sez6l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_NM_001253916, NM_001253917, NM_019982_5end |
EntrezGene: | Sez6l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.68e-16 | 23 |
neuroblast (sensu Vertebrata) | 9.68e-16 | 23 |
neuron | 1.06e-10 | 33 |
neuronal stem cell | 1.06e-10 | 33 |
neuroblast | 1.06e-10 | 33 |
electrically signaling cell | 1.06e-10 | 33 |
ectodermal cell | 4.27e-09 | 44 |
neurectodermal cell | 4.27e-09 | 44 |
neural cell | 6.84e-09 | 43 |
electrically responsive cell | 9.50e-08 | 39 |
electrically active cell | 9.50e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.48e-28 | 64 |
neural plate | 9.48e-28 | 64 |
presumptive neural plate | 9.48e-28 | 64 |
regional part of nervous system | 6.41e-27 | 54 |
central nervous system | 9.76e-26 | 73 |
neural tube | 3.28e-25 | 52 |
neural rod | 3.28e-25 | 52 |
future spinal cord | 3.28e-25 | 52 |
neural keel | 3.28e-25 | 52 |
ecto-epithelium | 3.89e-25 | 73 |
nervous system | 5.44e-25 | 75 |
ectoderm-derived structure | 6.58e-25 | 95 |
ectoderm | 6.58e-25 | 95 |
presumptive ectoderm | 6.58e-25 | 95 |
pre-chordal neural plate | 6.50e-23 | 49 |
gray matter | 3.31e-22 | 34 |
brain | 7.06e-22 | 47 |
future brain | 7.06e-22 | 47 |
regional part of brain | 3.17e-21 | 46 |
anterior neural tube | 1.41e-20 | 40 |
regional part of forebrain | 6.04e-20 | 39 |
forebrain | 6.04e-20 | 39 |
future forebrain | 6.04e-20 | 39 |
brain grey matter | 6.24e-19 | 29 |
regional part of telencephalon | 6.24e-19 | 29 |
telencephalon | 6.24e-19 | 29 |
structure with developmental contribution from neural crest | 2.81e-18 | 92 |
cerebral cortex | 1.35e-13 | 21 |
cerebral hemisphere | 1.35e-13 | 21 |
pallium | 1.35e-13 | 21 |
regional part of cerebral cortex | 2.43e-11 | 17 |
occipital lobe | 6.81e-09 | 10 |
visual cortex | 6.81e-09 | 10 |
neocortex | 6.81e-09 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.