FFCP PHASE1:Mm9::chr6:29346665..29346666,+: Difference between revisions
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|id=chr6:29346665..29346666,+ | |id=chr6:29346665..29346666,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.76e-09!23;CL:0000337!2.76e-09!23 | |ontology_enrichment_celltype=CL:0000117!2.76e-09!23;CL:0000337!2.76e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.64e-30,3;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0002614,1.34e-08,3;CL:0000540,7.84e-07,33;CL:0000047,7.84e-07,33;CL:0000031,7.84e-07,33;CL:0000404,7.84e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.31e-12!63;UBERON:0001017!2.80e-11!73;UBERON:0005743!2.80e-11!73;UBERON:0002616!4.90e-11!49;UBERON:0001049!6.75e-11!52;UBERON:0005068!6.75e-11!52;UBERON:0006241!6.75e-11!52;UBERON:0007135!6.75e-11!52;UBERON:0000073!9.64e-11!75;UBERON:0001016!9.64e-11!75;UBERON:0004121!1.00e-10!102;UBERON:0000924!1.00e-10!102;UBERON:0006601!1.00e-10!102;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0002346!1.72e-10!71;UBERON:0003075!1.72e-10!71;UBERON:0007284!1.72e-10!71;UBERON:0003056!1.84e-09!49;UBERON:0002020!5.09e-09!34;UBERON:0000153!4.03e-08!94;UBERON:0002780!2.70e-07!39;UBERON:0001890!2.70e-07!39;UBERON:0006240!2.70e-07!39;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29;UBERON:0003080!5.36e-07!40 | |ontology_enrichment_uberon=UBERON:0000033!5.31e-12!63;UBERON:0001017!2.80e-11!73;UBERON:0005743!2.80e-11!73;UBERON:0002616!4.90e-11!49;UBERON:0001049!6.75e-11!52;UBERON:0005068!6.75e-11!52;UBERON:0006241!6.75e-11!52;UBERON:0007135!6.75e-11!52;UBERON:0000073!9.64e-11!75;UBERON:0001016!9.64e-11!75;UBERON:0004121!1.00e-10!102;UBERON:0000924!1.00e-10!102;UBERON:0006601!1.00e-10!102;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0002346!1.72e-10!71;UBERON:0003075!1.72e-10!71;UBERON:0007284!1.72e-10!71;UBERON:0003056!1.84e-09!49;UBERON:0002020!5.09e-09!34;UBERON:0000153!4.03e-08!94;UBERON:0002780!2.70e-07!39;UBERON:0001890!2.70e-07!39;UBERON:0006240!2.70e-07!39;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29;UBERON:0003080!5.36e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,5.64e-30,3;UBERON:0002275,5.64e-30,3;UBERON:0002038,1.34e-08,3;UBERON:0009663,1.34e-08,3;UBERON:0009661,1.34e-08,3;UBERON:0000125,1.34e-08,3;UBERON:0002308,1.34e-08,3;UBERON:0000073,2.91e-07,54;UBERON:0002950,9.17e-07,4;UBERON:0001891,9.17e-07,4;UBERON:0009616,9.17e-07,4;UBERON:0010286,9.17e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0,0.191690942036473,0,2.20231761998777,1.53224805702225,0.46081959976873,0.131886287730194,0.274462930807229,0,0,1.68828783009504,0.916789486660861,0,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0.521472960576829,0.255715457330331,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0.150704817835715,0.816437989815934,0.384341160854549,0.655912071918102,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,0.685082519770642,0,0,0,0,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0,0.191690942036473,0,2.20231761998777,1.53224805702225,0.46081959976873,0.131886287730194,0.274462930807229,0,0,1.68828783009504,0.916789486660861,0,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0.521472960576829,0.255715457330331,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0.150704817835715,0.816437989815934,0.384341160854549,0.655912071918102,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,0.685082519770642,0,0,0,0,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p5@Ccdc136 | |short_description=p5@Ccdc136 | ||
}} | }} |
Revision as of 20:44, 13 November 2012
Short description: | p5@Ccdc136 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ccdc136_5end |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | 29bp_to_ENSMUST00000031781, ENSMUST00000096084, ENSMUST00000166874_5end |
EntrezGene: | Ccdc136 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.64e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.91e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-09 | 23 |
neuron of the substantia nigra | 1.34e-08 | 3 |
neuron | 7.84e-07 | 33 |
neuronal stem cell | 7.84e-07 | 33 |
neuroblast | 7.84e-07 | 33 |
electrically signaling cell | 7.84e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 5.64e-30 | 3 |
reticular formation | 5.64e-30 | 3 |
substantia nigra | 1.34e-08 | 3 |
telencephalic nucleus | 1.34e-08 | 3 |
midbrain nucleus | 1.34e-08 | 3 |
neural nucleus | 1.34e-08 | 3 |
nucleus of brain | 1.34e-08 | 3 |
regional part of nervous system | 2.91e-07 | 54 |
regional part of midbrain | 9.17e-07 | 4 |
midbrain | 9.17e-07 | 4 |
presumptive midbrain | 9.17e-07 | 4 |
midbrain neural tube | 9.17e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.