FFCP PHASE1:Mm9::chr15:77137497..77137533,-: Difference between revisions
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|id=chr15:77137497..77137533,- | |id=chr15:77137497..77137533,- | ||
|ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0000393!7.23e-11!39;CL:0000211!7.23e-11!39;CL:0000221!2.47e-09!44;CL:0000133!2.47e-09!44;CL:0002319!2.53e-09!43 | |ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0000393!7.23e-11!39;CL:0000211!7.23e-11!39;CL:0000221!2.47e-09!44;CL:0000133!2.47e-09!44;CL:0002319!2.53e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.28e-18,33;CL:0000047,4.28e-18,33;CL:0000031,4.28e-18,33;CL:0000404,4.28e-18,33;CL:0000117,3.45e-15,23;CL:0000337,3.45e-15,23;CL:0000393,6.58e-13,39;CL:0000211,6.58e-13,39;CL:0000221,6.91e-11,44;CL:0000133,6.91e-11,44;CL:0002319,7.10e-11,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.38e-18!73;UBERON:0005743!4.38e-18!73;UBERON:0000073!5.66e-17!75;UBERON:0001016!5.66e-17!75;UBERON:0004121!4.50e-16!102;UBERON:0000924!4.50e-16!102;UBERON:0006601!4.50e-16!102;UBERON:0002346!5.56e-15!71;UBERON:0003075!5.56e-15!71;UBERON:0007284!5.56e-15!71;UBERON:0003056!3.84e-14!49;UBERON:0000033!1.23e-13!63;UBERON:0001049!4.05e-13!52;UBERON:0005068!4.05e-13!52;UBERON:0006241!4.05e-13!52;UBERON:0007135!4.05e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002020!1.70e-12!34;UBERON:0003080!3.57e-12!40;UBERON:0002616!4.36e-12!49;UBERON:0002780!4.48e-12!39;UBERON:0001890!4.48e-12!39;UBERON:0006240!4.48e-12!39;UBERON:0002791!6.00e-10!29;UBERON:0003528!6.00e-10!29;UBERON:0001893!6.00e-10!29;UBERON:0000468!3.00e-08!333;UBERON:0000922!4.03e-07!328;UBERON:0000956!6.26e-07!21;UBERON:0001869!6.26e-07!21;UBERON:0000203!6.26e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!4.38e-18!73;UBERON:0005743!4.38e-18!73;UBERON:0000073!5.66e-17!75;UBERON:0001016!5.66e-17!75;UBERON:0004121!4.50e-16!102;UBERON:0000924!4.50e-16!102;UBERON:0006601!4.50e-16!102;UBERON:0002346!5.56e-15!71;UBERON:0003075!5.56e-15!71;UBERON:0007284!5.56e-15!71;UBERON:0003056!3.84e-14!49;UBERON:0000033!1.23e-13!63;UBERON:0001049!4.05e-13!52;UBERON:0005068!4.05e-13!52;UBERON:0006241!4.05e-13!52;UBERON:0007135!4.05e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002020!1.70e-12!34;UBERON:0003080!3.57e-12!40;UBERON:0002616!4.36e-12!49;UBERON:0002780!4.48e-12!39;UBERON:0001890!4.48e-12!39;UBERON:0006240!4.48e-12!39;UBERON:0002791!6.00e-10!29;UBERON:0003528!6.00e-10!29;UBERON:0001893!6.00e-10!29;UBERON:0000468!3.00e-08!333;UBERON:0000922!4.03e-07!328;UBERON:0000956!6.26e-07!21;UBERON:0001869!6.26e-07!21;UBERON:0000203!6.26e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.54e-20,73;UBERON:0001016,1.13e-18,75;UBERON:0002346,8.89e-18,64;UBERON:0003075,8.89e-18,64;UBERON:0007284,8.89e-18,64;UBERON:0004121,3.43e-17,95;UBERON:0000924,3.43e-17,95;UBERON:0006601,3.43e-17,95;UBERON:0000073,4.10e-16,54;UBERON:0003056,7.98e-16,49;UBERON:0010371,1.74e-14,73;UBERON:0010314,2.63e-14,92;UBERON:0001049,4.80e-14,52;UBERON:0005068,4.80e-14,52;UBERON:0006241,4.80e-14,52;UBERON:0007135,4.80e-14,52;UBERON:0002020,6.22e-14,34;UBERON:0003080,1.36e-13,40;UBERON:0002780,1.79e-13,39;UBERON:0001890,1.79e-13,39;UBERON:0006240,1.79e-13,39;UBERON:0000955,2.13e-12,47;UBERON:0006238,2.13e-12,47;UBERON:0002616,7.72e-12,46;UBERON:0003528,5.76e-11,29;UBERON:0002791,5.76e-11,29;UBERON:0001893,5.76e-11,29;UBERON:0000956,1.88e-07,21;UBERON:0001869,1.88e-07,21;UBERON:0000203,1.88e-07,21;UBERON:0000922,3.83e-07,320 | |||
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| ||
|short_description=p8@Rbfox2 | |short_description=p8@Rbfox2 | ||
}} | }} |
Revision as of 20:44, 14 November 2012
Short description: | p8@Rbfox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rbfox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -14bp_to_ENSMUST00000048145, ENSMUST00000171751, NM_001110827, NM_053104, NM_175387, uc007wng.2, uc007wnh.2, uc007wni.2_5end |
EntrezGene: | Rbfox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.28e-18 | 33 |
neuronal stem cell | 4.28e-18 | 33 |
neuroblast | 4.28e-18 | 33 |
electrically signaling cell | 4.28e-18 | 33 |
CNS neuron (sensu Vertebrata) | 3.45e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.45e-15 | 23 |
electrically responsive cell | 6.58e-13 | 39 |
electrically active cell | 6.58e-13 | 39 |
ectodermal cell | 6.91e-11 | 44 |
neurectodermal cell | 6.91e-11 | 44 |
neural cell | 7.10e-11 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.54e-20 | 73 |
nervous system | 1.13e-18 | 75 |
neurectoderm | 8.89e-18 | 64 |
neural plate | 8.89e-18 | 64 |
presumptive neural plate | 8.89e-18 | 64 |
ectoderm-derived structure | 3.43e-17 | 95 |
ectoderm | 3.43e-17 | 95 |
presumptive ectoderm | 3.43e-17 | 95 |
regional part of nervous system | 4.10e-16 | 54 |
pre-chordal neural plate | 7.98e-16 | 49 |
ecto-epithelium | 1.74e-14 | 73 |
structure with developmental contribution from neural crest | 2.63e-14 | 92 |
neural tube | 4.80e-14 | 52 |
neural rod | 4.80e-14 | 52 |
future spinal cord | 4.80e-14 | 52 |
neural keel | 4.80e-14 | 52 |
gray matter | 6.22e-14 | 34 |
anterior neural tube | 1.36e-13 | 40 |
regional part of forebrain | 1.79e-13 | 39 |
forebrain | 1.79e-13 | 39 |
future forebrain | 1.79e-13 | 39 |
brain | 2.13e-12 | 47 |
future brain | 2.13e-12 | 47 |
regional part of brain | 7.72e-12 | 46 |
brain grey matter | 5.76e-11 | 29 |
regional part of telencephalon | 5.76e-11 | 29 |
telencephalon | 5.76e-11 | 29 |
cerebral cortex | 1.88e-07 | 21 |
cerebral hemisphere | 1.88e-07 | 21 |
pallium | 1.88e-07 | 21 |
embryo | 3.83e-07 | 320 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.