FFCP PHASE1:Mm9::chr15:44578120..44578143,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:44578120..44578143,-|id=chr15:44578120..44578143,-|ontology_enrichment_celltype=CL:0002609!3.07e-09!6|ontology_enrichment_celltype_v019_2=CL:0002609,5.08e-45,6;CL:0002608,4.72e-23,3;CL:0000117,1.56e-15,23;CL:0000337,1.56e-15,23;CL:0000540,1.07e-10,33;CL:0000047,1.07e-10,33;CL:0000031,1.07e-10,33;CL:0000404,1.07e-10,33;CL:0000393,5.59e-09,39;CL:0000211,5.59e-09,39;CL:0002319,4.26e-08,43;CL:0000221,6.69e-08,44;CL:0000133,6.69e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.81e-08!63;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0000955!4.67e-08!50;UBERON:0006238!4.67e-08!50;UBERON:0002616!1.59e-07!49;UBERON:0002780!3.25e-07!39;UBERON:0001890!3.25e-07!39;UBERON:0006240!3.25e-07!39;UBERON:0003056!4.49e-07!49;UBERON:0003080!6.73e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.51e-17,21;UBERON:0001869,4.51e-17,21;UBERON:0000203,4.51e-17,21;UBERON:0003528,2.98e-12,29;UBERON:0002791,2.98e-12,29;UBERON:0001893,2.98e-12,29;UBERON:0003056,1.47e-11,49;UBERON:0002346,1.00e-10,64;UBERON:0003075,1.00e-10,64;UBERON:0007284,1.00e-10,64;UBERON:0002020,2.20e-10,34;UBERON:0001954,3.03e-10,7;UBERON:0003022,3.03e-10,7;UBERON:0002421,3.03e-10,7;UBERON:0000349,3.03e-10,7;UBERON:0002600,3.03e-10,7;UBERON:0002616,9.17e-10,46;UBERON:0000955,1.53e-09,47;UBERON:0006238,1.53e-09,47;UBERON:0010371,2.74e-09,73;UBERON:0002780,5.43e-09,39;UBERON:0001890,5.43e-09,39;UBERON:0006240,5.43e-09,39;UBERON:0003080,9.38e-09,40;UBERON:0001049,1.47e-08,52;UBERON:0005068,1.47e-08,52;UBERON:0006241,1.47e-08,52;UBERON:0007135,1.47e-08,52;UBERON:0004121,1.90e-08,95;UBERON:0000924,1.90e-08,95;UBERON:0006601,1.90e-08,95;UBERON:0000073,3.23e-08,54;UBERON:0001017,1.93e-07,73;UBERON:0002619,3.15e-07,17;UBERON:0001016,3.21e-07,75;UBERON:0010314,3.62e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,4.14758449233911,6.88530285491622,5.67877395648731,0,0.220868540951614,2.57230678351403,2.68367318851062,5.51531271966013,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.209446706813455,0,0,0,0,0,0,0.753926112677186,0,0.255715457330331,0.20778804455956,0,0,0,0,1.26265113531884,0,0,0,0.30140963567143,0,0,0,1.29351685369508,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0.936113019343682,0.757736633841335,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0.643105137237198,0.501572104035363,1.12950368523413,0.920650473014354,0,0.515559547031063,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.943131706930381,0.749132059759059,0.320125762024346,0.34461281373368,0.476293691283074,0.579421629724277,0,0,0.441596760403192,1.37147700954166,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0.507687647350059,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0|short_description=p@chr15:44578120..44578143,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:44578120..44578143,- | |||
|id=chr15:44578120..44578143,- | |||
|ontology_enrichment_celltype=CL:0002609!3.07e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.08e-45,6;CL:0002608,4.72e-23,3;CL:0000117,1.56e-15,23;CL:0000337,1.56e-15,23;CL:0000540,1.07e-10,33;CL:0000047,1.07e-10,33;CL:0000031,1.07e-10,33;CL:0000404,1.07e-10,33;CL:0000393,5.59e-09,39;CL:0000211,5.59e-09,39;CL:0002319,4.26e-08,43;CL:0000221,6.69e-08,44;CL:0000133,6.69e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.81e-08!63;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0000955!4.67e-08!50;UBERON:0006238!4.67e-08!50;UBERON:0002616!1.59e-07!49;UBERON:0002780!3.25e-07!39;UBERON:0001890!3.25e-07!39;UBERON:0006240!3.25e-07!39;UBERON:0003056!4.49e-07!49;UBERON:0003080!6.73e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.51e-17,21;UBERON:0001869,4.51e-17,21;UBERON:0000203,4.51e-17,21;UBERON:0003528,2.98e-12,29;UBERON:0002791,2.98e-12,29;UBERON:0001893,2.98e-12,29;UBERON:0003056,1.47e-11,49;UBERON:0002346,1.00e-10,64;UBERON:0003075,1.00e-10,64;UBERON:0007284,1.00e-10,64;UBERON:0002020,2.20e-10,34;UBERON:0001954,3.03e-10,7;UBERON:0003022,3.03e-10,7;UBERON:0002421,3.03e-10,7;UBERON:0000349,3.03e-10,7;UBERON:0002600,3.03e-10,7;UBERON:0002616,9.17e-10,46;UBERON:0000955,1.53e-09,47;UBERON:0006238,1.53e-09,47;UBERON:0010371,2.74e-09,73;UBERON:0002780,5.43e-09,39;UBERON:0001890,5.43e-09,39;UBERON:0006240,5.43e-09,39;UBERON:0003080,9.38e-09,40;UBERON:0001049,1.47e-08,52;UBERON:0005068,1.47e-08,52;UBERON:0006241,1.47e-08,52;UBERON:0007135,1.47e-08,52;UBERON:0004121,1.90e-08,95;UBERON:0000924,1.90e-08,95;UBERON:0006601,1.90e-08,95;UBERON:0000073,3.23e-08,54;UBERON:0001017,1.93e-07,73;UBERON:0002619,3.15e-07,17;UBERON:0001016,3.21e-07,75;UBERON:0010314,3.62e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,4.14758449233911,6.88530285491622,5.67877395648731,0,0.220868540951614,2.57230678351403,2.68367318851062,5.51531271966013,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.209446706813455,0,0,0,0,0,0,0.753926112677186,0,0.255715457330331,0.20778804455956,0,0,0,0,1.26265113531884,0,0,0,0.30140963567143,0,0,0,1.29351685369508,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0.936113019343682,0.757736633841335,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0.643105137237198,0.501572104035363,1.12950368523413,0.920650473014354,0,0.515559547031063,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.943131706930381,0.749132059759059,0.320125762024346,0.34461281373368,0.476293691283074,0.579421629724277,0,0,0.441596760403192,1.37147700954166,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0.507687647350059,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p@chr15:44578120..44578143,- | |||
}} |
Revision as of 10:31, 13 September 2013
Short description: | p@chr15:44578120..44578143, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:44578120..44578143, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.08e-45 | 6 |
hippocampal neuron | 4.72e-23 | 3 |
CNS neuron (sensu Vertebrata) | 1.56e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.56e-15 | 23 |
neuron | 1.07e-10 | 33 |
neuronal stem cell | 1.07e-10 | 33 |
neuroblast | 1.07e-10 | 33 |
electrically signaling cell | 1.07e-10 | 33 |
electrically responsive cell | 5.59e-09 | 39 |
electrically active cell | 5.59e-09 | 39 |
neural cell | 4.26e-08 | 43 |
ectodermal cell | 6.69e-08 | 44 |
neurectodermal cell | 6.69e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.