Personal tools

FFCP PHASE1:Mm9::chr3:151911315..151911338,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=68810|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=0bp_to_uc008rtc.1_5end|description=CAGE_peak_1_at_Nexn_5end|id=chr3:151911315..151911338,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.57e-13!18;UBERON:0000948!4.57e-13!18;UBERON:0005498!4.57e-13!18;UBERON:0004140!4.57e-13!18;UBERON:0009881!4.57e-13!18;UBERON:0004141!4.57e-13!18;UBERON:0003084!4.57e-13!18;UBERON:0007005!4.57e-13!18;UBERON:0004139!4.57e-13!18;UBERON:0004291!4.57e-13!18;UBERON:0004535!3.50e-10!23;UBERON:0001009!3.50e-10!23;UBERON:0004872!9.80e-09!33;UBERON:0003103!2.05e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.54e-20,18;UBERON:0000948,4.54e-20,18;UBERON:0005498,4.54e-20,18;UBERON:0004140,4.54e-20,18;UBERON:0009881,4.54e-20,18;UBERON:0004141,4.54e-20,18;UBERON:0003084,4.54e-20,18;UBERON:0007005,4.54e-20,18;UBERON:0004139,4.54e-20,18;UBERON:0004291,4.54e-20,18;UBERON:0004535,1.52e-14,23;UBERON:0001009,1.52e-14,23;UBERON:0004872,1.27e-08,33;UBERON:0003103,5.92e-08,43;UBERON:0005418,7.86e-07,5;UBERON:0002472,7.86e-07,5;UBERON:0008784,7.86e-07,5;UBERON:0006058,7.86e-07,5;UBERON:0004709,7.86e-07,5;UBERON:0002529,7.86e-07,5;UBERON:0010538,7.86e-07,5;UBERON:0005420,7.86e-07,5;UBERON:0010758,7.86e-07,5;UBERON:0000978,7.86e-07,5;UBERON:0002103,7.86e-07,5;UBERON:0000376,7.86e-07,5;UBERON:0000154,7.86e-07,5;UBERON:0010709,7.86e-07,5;UBERON:0005730,7.86e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0.514518872071894,0.573066879877513,2.57836046138721,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.638436690425939,0.46081959976873,0,0,0,0,0,0.61119299110724,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,3.23022166303029,0.852151612890289,0.519572009205738,1.41335829804136,0,1.28326477414318,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0.608930956624282,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0.144599356919912,2.65383165584962,1.7794353494215,4.19598885074748,1.93950101254089,0,0.585561594023094,0.209446706813455,0,0,0,0,0.149790639404823,0.915001205637253,0.376963056338593,0,0.255715457330331,0.41557608911912,0.324482526135515,0.509196819251581,0.373220911830279,0.252722758433675,0.841767423545896,0.260240885925407,0,0.360124259610698,1.05493372485001,0.340182495756639,0.384341160854549,0.0937017245597288,2.58703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,2.22437799380478,1.0447564995665,0.61734640922383,0,0,0,0,2.27838349789052,16.1822981386956,11.3439098720439,4.97163944728941,16.9217239302767,25.9168749650795,28.1366073147993,10.7309360559848,18.5656894363799,17.2787842409154,29.0576411419999,12.4845966700618,10.2339991197733,21.9550115291051,7.1129401942997,0,0,0,0,0.639864751605702,1.62565670302307,0.257734922644187,0.201683524623343,0,0,1.89811624617805,0.329397909448022,1.50801125280162,0.397912944082302,0.19496408711912,0,2.16138049874694,0.199141273254367,0,0.571242563048644,0,1.22190796707189,1.35766741017338,0.771494018793504,0.822074982615345,0.885660887877613,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,5.75072826109418,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0.814824882210129,3.39490171550376,3.75504397261603,2.01007508930179,0.714130922658041,2.14647012643579,3.78324345854858,7.9727288273559,4.46473352240964,2.62181303545181,2.24490476425664,0.433947175744535,0,0,0,0,0.160550589987792,0,0.163934945376675,4.03953483526997,0,0,0,0,0,0,0,0,0.395287777946524,0,0.425820255624806,0,0.488660878060728,0.989820737835213,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.65954501176592,0.807322133479528,0.180938774784468,0.238744688006273,0.164140899745061,1.1659233465194,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0.228778173206523,0,0,0,0,0.158167996790568,1.21991680276109,1.29606408986162,2.09088296014469,2.62035076495413,4.45052343069908,0.495920734352016,0.26175594198403,0.259229946583586,0,0.56369293868419,0,0,0,0.129159823477731,1.18269287843545,0.704143431874524,0.39061315453185,0.209718688851422,0,1.15212002503146,0,0,0,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,0,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0.888986911206461,1.44224540067226,0.962757628775446,0.758091635291392,1.01391719956096,1.69763707247469,2.1537546718073,0.960377286073039,0.746661096422973,0.952587382566147,0.695305955669133,0.77163688185482,2.06042950401653,1.32479028120958,4.80016953339582,3.72699192934609,1.1921809497366,1.30811774969096,0.941093804153306,1.18460451048347,2.92684756596436,2.89376682581627,0.271608227691724,1.68342681497322,0.949080144993393,2.56111654176465,2.04615521584845,1.08455788830176,0.192906610981141,0,0,0.214871054048298,0.956441660344217,0.441182838239031,0.695603506861264|short_description=p1@Nexn}}
|EntrezGene=68810
|HGNC=
|MCL_coexpression_id=19
|UniProt=
|association_with_transcript=0bp_to_uc008rtc.1_5end
|description=CAGE_peak_1_at_Nexn_5end
|id=chr3:151911315..151911338,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!4.57e-13!18;UBERON:0000948!4.57e-13!18;UBERON:0005498!4.57e-13!18;UBERON:0004140!4.57e-13!18;UBERON:0009881!4.57e-13!18;UBERON:0004141!4.57e-13!18;UBERON:0003084!4.57e-13!18;UBERON:0007005!4.57e-13!18;UBERON:0004139!4.57e-13!18;UBERON:0004291!4.57e-13!18;UBERON:0004535!3.50e-10!23;UBERON:0001009!3.50e-10!23;UBERON:0004872!9.80e-09!33;UBERON:0003103!2.05e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.54e-20,18;UBERON:0000948,4.54e-20,18;UBERON:0005498,4.54e-20,18;UBERON:0004140,4.54e-20,18;UBERON:0009881,4.54e-20,18;UBERON:0004141,4.54e-20,18;UBERON:0003084,4.54e-20,18;UBERON:0007005,4.54e-20,18;UBERON:0004139,4.54e-20,18;UBERON:0004291,4.54e-20,18;UBERON:0004535,1.52e-14,23;UBERON:0001009,1.52e-14,23;UBERON:0004872,1.27e-08,33;UBERON:0003103,5.92e-08,43;UBERON:0005418,7.86e-07,5;UBERON:0002472,7.86e-07,5;UBERON:0008784,7.86e-07,5;UBERON:0006058,7.86e-07,5;UBERON:0004709,7.86e-07,5;UBERON:0002529,7.86e-07,5;UBERON:0010538,7.86e-07,5;UBERON:0005420,7.86e-07,5;UBERON:0010758,7.86e-07,5;UBERON:0000978,7.86e-07,5;UBERON:0002103,7.86e-07,5;UBERON:0000376,7.86e-07,5;UBERON:0000154,7.86e-07,5;UBERON:0010709,7.86e-07,5;UBERON:0005730,7.86e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0.514518872071894,0.573066879877513,2.57836046138721,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.638436690425939,0.46081959976873,0,0,0,0,0,0.61119299110724,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,3.23022166303029,0.852151612890289,0.519572009205738,1.41335829804136,0,1.28326477414318,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0.608930956624282,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0.144599356919912,2.65383165584962,1.7794353494215,4.19598885074748,1.93950101254089,0,0.585561594023094,0.209446706813455,0,0,0,0,0.149790639404823,0.915001205637253,0.376963056338593,0,0.255715457330331,0.41557608911912,0.324482526135515,0.509196819251581,0.373220911830279,0.252722758433675,0.841767423545896,0.260240885925407,0,0.360124259610698,1.05493372485001,0.340182495756639,0.384341160854549,0.0937017245597288,2.58703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,2.22437799380478,1.0447564995665,0.61734640922383,0,0,0,0,2.27838349789052,16.1822981386956,11.3439098720439,4.97163944728941,16.9217239302767,25.9168749650795,28.1366073147993,10.7309360559848,18.5656894363799,17.2787842409154,29.0576411419999,12.4845966700618,10.2339991197733,21.9550115291051,7.1129401942997,0,0,0,0,0.639864751605702,1.62565670302307,0.257734922644187,0.201683524623343,0,0,1.89811624617805,0.329397909448022,1.50801125280162,0.397912944082302,0.19496408711912,0,2.16138049874694,0.199141273254367,0,0.571242563048644,0,1.22190796707189,1.35766741017338,0.771494018793504,0.822074982615345,0.885660887877613,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,5.75072826109418,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0.814824882210129,3.39490171550376,3.75504397261603,2.01007508930179,0.714130922658041,2.14647012643579,3.78324345854858,7.9727288273559,4.46473352240964,2.62181303545181,2.24490476425664,0.433947175744535,0,0,0,0,0.160550589987792,0,0.163934945376675,4.03953483526997,0,0,0,0,0,0,0,0,0.395287777946524,0,0.425820255624806,0,0.488660878060728,0.989820737835213,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.65954501176592,0.807322133479528,0.180938774784468,0.238744688006273,0.164140899745061,1.1659233465194,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0.228778173206523,0,0,0,0,0.158167996790568,1.21991680276109,1.29606408986162,2.09088296014469,2.62035076495413,4.45052343069908,0.495920734352016,0.26175594198403,0.259229946583586,0,0.56369293868419,0,0,0,0.129159823477731,1.18269287843545,0.704143431874524,0.39061315453185,0.209718688851422,0,1.15212002503146,0,0,0,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,0,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0,0,0.183843508450014,0.888986911206461,1.44224540067226,0.962757628775446,0.758091635291392,1.01391719956096,1.69763707247469,2.1537546718073,0.960377286073039,0.746661096422973,0.952587382566147,0.695305955669133,0.77163688185482,2.06042950401653,1.32479028120958,4.80016953339582,3.72699192934609,1.1921809497366,1.30811774969096,0.941093804153306,1.18460451048347,2.92684756596436,2.89376682581627,0.271608227691724,1.68342681497322,0.949080144993393,2.56111654176465,2.04615521584845,1.08455788830176,0.192906610981141,0,0,0.214871054048298,0.956441660344217,0.441182838239031,0.695603506861264
|short_description=p1@Nexn
}}

Revision as of 01:51, 14 September 2013

Short description:p1@Nexn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nexn_5end
Coexpression cluster:MCL_coexpression_mm9:19
Association with transcript: 0bp_to_uc008rtc.1_5end
EntrezGene:Nexn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nexn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F516.18
heart, embryo E13.CNhs11013.376-3I911.34
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C625.92
heart, embryo E17.CNhs11025.479-18E528.14
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E318.57
heart, neonate N03.CNhs11221.1349-25I217.28
heart, neonate N10.CNhs11118.749-24G129.06
heart, neonate N16.CNhs11209.782-15G112.48
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D321.96
heart, neonate N30.CNhs11202.1390-42D27.11
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primary circulatory organ4.54e-2018
heart4.54e-2018
primitive heart tube4.54e-2018
primary heart field4.54e-2018
anterior lateral plate mesoderm4.54e-2018
heart tube4.54e-2018
heart primordium4.54e-2018
cardiac mesoderm4.54e-2018
cardiogenic plate4.54e-2018
heart rudiment4.54e-2018
cardiovascular system1.52e-1423
circulatory system1.52e-1423
splanchnic layer of lateral plate mesoderm1.27e-0833
compound organ5.92e-0843
hindlimb bud7.86e-075
stylopod7.86e-075
lower limb segment7.86e-075
multi-limb segment region7.86e-075
pelvic appendage7.86e-075
limb segment7.86e-075
paired limb/fin segment7.86e-075
pelvic appendage bud7.86e-075
subdivision of organism along appendicular axis7.86e-075
leg7.86e-075
hindlimb7.86e-075
hindlimb stylopod7.86e-075
posterior region of body7.86e-075
pelvic complex7.86e-075
hindlimb/pelvic fin field7.86e-075







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:151911315..151911338,-&oldid=2996054"