FFCP PHASE1:Mm9::chr4:77857662..77857694,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19266|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=-19bp_to_ENSMUST00000138955,ENSMUST00000173592_5end|description=CAGE_peak_7_at_Ptprd_5end|id=chr4:77857662..77857694,-|ontology_enrichment_celltype=CL:0000117!7.96e-18!23;CL:0000337!7.96e-18!23;CL:0000540!4.01e-12!33;CL:0000047!4.01e-12!33;CL:0000031!4.01e-12!33;CL:0000404!4.01e-12!33;CL:0000393!8.54e-09!39;CL:0000211!8.54e-09!39;CL:0000221!2.56e-07!44;CL:0000133!2.56e-07!44;CL:0002319!3.68e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-23,23;CL:0000337,5.05e-23,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000393,1.90e-10,39;CL:0000211,1.90e-10,39;CL:0002319,7.91e-09,43;CL:0000221,1.79e-08,44;CL:0000133,1.79e-08,44;CL:0002609,1.13e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.43e-29!71;UBERON:0003075!4.43e-29!71;UBERON:0007284!4.43e-29!71;UBERON:0001049!4.58e-28!52;UBERON:0005068!4.58e-28!52;UBERON:0006241!4.58e-28!52;UBERON:0007135!4.58e-28!52;UBERON:0000033!3.38e-27!63;UBERON:0003056!3.74e-27!49;UBERON:0000955!1.63e-26!50;UBERON:0006238!1.63e-26!50;UBERON:0001017!7.06e-26!73;UBERON:0005743!7.06e-26!73;UBERON:0002616!1.12e-25!49;UBERON:0002020!1.32e-24!34;UBERON:0000073!1.39e-24!75;UBERON:0001016!1.39e-24!75;UBERON:0003080!1.78e-24!40;UBERON:0002780!1.48e-23!39;UBERON:0001890!1.48e-23!39;UBERON:0006240!1.48e-23!39;UBERON:0004121!4.27e-22!102;UBERON:0000924!4.27e-22!102;UBERON:0006601!4.27e-22!102;UBERON:0002791!1.60e-20!29;UBERON:0003528!1.60e-20!29;UBERON:0001893!1.60e-20!29;UBERON:0000956!3.04e-15!21;UBERON:0001869!3.04e-15!21;UBERON:0000203!3.04e-15!21;UBERON:0007811!4.83e-15!86;UBERON:0000153!6.30e-14!94;UBERON:0002619!7.39e-12!17;UBERON:0002021!7.82e-11!10;UBERON:0000411!7.82e-11!10;UBERON:0001950!7.82e-11!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.01e-35,54;UBERON:0001049,1.40e-32,52;UBERON:0005068,1.40e-32,52;UBERON:0006241,1.40e-32,52;UBERON:0007135,1.40e-32,52;UBERON:0002020,1.75e-32,34;UBERON:0001017,4.08e-29,73;UBERON:0002346,1.57e-28,64;UBERON:0003075,1.57e-28,64;UBERON:0007284,1.57e-28,64;UBERON:0003080,2.03e-28,40;UBERON:0001016,6.68e-28,75;UBERON:0000955,1.41e-27,47;UBERON:0006238,1.41e-27,47;UBERON:0002780,3.10e-27,39;UBERON:0001890,3.10e-27,39;UBERON:0006240,3.10e-27,39;UBERON:0003528,4.56e-27,29;UBERON:0002791,4.56e-27,29;UBERON:0001893,4.56e-27,29;UBERON:0002616,1.56e-26,46;UBERON:0003056,4.84e-26,49;UBERON:0010371,3.87e-23,73;UBERON:0004121,2.95e-22,95;UBERON:0000924,2.95e-22,95;UBERON:0006601,2.95e-22,95;UBERON:0000956,4.36e-20,21;UBERON:0001869,4.36e-20,21;UBERON:0000203,4.36e-20,21;UBERON:0002619,1.34e-15,17;UBERON:0010314,2.47e-15,92;UBERON:0002021,8.65e-14,10;UBERON:0000411,8.65e-14,10;UBERON:0001950,8.65e-14,10;UBERON:0002420,5.09e-08,8;UBERON:0007245,5.09e-08,8;UBERON:0010009,5.09e-08,8;UBERON:0010011,5.09e-08,8;UBERON:0000454,5.09e-08,8;UBERON:0000025,1.27e-07,114;UBERON:0002240,4.86e-07,6;UBERON:0005174,4.86e-07,6;UBERON:0001137,4.86e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,5.28990979272033,6.33831403506179,0,0,0,0,0,0,0,11.3021677416241,12.5555522648472,9.67494822216357,6.28432165688368,6.40518768759679,8.45186514583183,4.60058260887535,10.1114066527102,5.50579404996943,8.81042632787795,5.83704826373725,6.59431438650969,4.66586982372289,4.16730696445408,2.79182999001381,6.19038871034848,4.27835093775068,11.490514833473,7.40332740155335,7.82877672466262,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,14.6794826616726,6.40500843946077,6.03140890141749,38.5889990826854,44.2387741181472,7.89594569326328,12.0058534670141,0.101839363850316,0,0,0.841767423545896,0.130120442962704,0.459804208866946,0.180062129805349,1.05493372485001,1.83698547708585,1.7935920839879,0.749613796477831,2.32833033665114,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,3.49875682089567,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,4.45404409050372,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,7.71171159412337,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,6.46835250932197,0.18006109403131,0,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,0.304464949114599,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,105.608594569391,116.001959599809,118.589371281955,95.2066630184029,78.7844897736239,97.4458127632714,68.8522950236442,63.9456108578393,63.4399372577886,74.5574848922621,0.103787347584177,0.798049746802062,1.02440163452481,2.91728060481953,0.628839487883947,0.551530525350042,3.11145418922261,4.32673620201678,2.56735367673452,2.77966932940177,4.56262739802432,3.77252682772152,2.99652823903624,3.71345883948242,3.27382173046996,2.85776214769844,2.78122382267653,2.89363830695558,2.88460130562315,2.35518272215036,3.77156177623957,3.01708870470874,2.86123427936785,4.0696996657052,3.57615645578256,3.04612588410035,3.47563148458268,2.36762740294059,3.39510284614654,3.92799590160417,3.6776855618494,3.25064791839359,2.04615521584845,3.40861050609125,3.08650577569826,4.49659040288303,0.935726433781634,2.14871054048298,0.956441660344217,0,0.695603506861264|short_description=p7@Ptprd}} | ||
|EntrezGene=19266 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENSMUST00000138955,ENSMUST00000173592_5end | |||
|description=CAGE_peak_7_at_Ptprd_5end | |||
|id=chr4:77857662..77857694,- | |||
|ontology_enrichment_celltype=CL:0000117!7.96e-18!23;CL:0000337!7.96e-18!23;CL:0000540!4.01e-12!33;CL:0000047!4.01e-12!33;CL:0000031!4.01e-12!33;CL:0000404!4.01e-12!33;CL:0000393!8.54e-09!39;CL:0000211!8.54e-09!39;CL:0000221!2.56e-07!44;CL:0000133!2.56e-07!44;CL:0002319!3.68e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-23,23;CL:0000337,5.05e-23,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000393,1.90e-10,39;CL:0000211,1.90e-10,39;CL:0002319,7.91e-09,43;CL:0000221,1.79e-08,44;CL:0000133,1.79e-08,44;CL:0002609,1.13e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.43e-29!71;UBERON:0003075!4.43e-29!71;UBERON:0007284!4.43e-29!71;UBERON:0001049!4.58e-28!52;UBERON:0005068!4.58e-28!52;UBERON:0006241!4.58e-28!52;UBERON:0007135!4.58e-28!52;UBERON:0000033!3.38e-27!63;UBERON:0003056!3.74e-27!49;UBERON:0000955!1.63e-26!50;UBERON:0006238!1.63e-26!50;UBERON:0001017!7.06e-26!73;UBERON:0005743!7.06e-26!73;UBERON:0002616!1.12e-25!49;UBERON:0002020!1.32e-24!34;UBERON:0000073!1.39e-24!75;UBERON:0001016!1.39e-24!75;UBERON:0003080!1.78e-24!40;UBERON:0002780!1.48e-23!39;UBERON:0001890!1.48e-23!39;UBERON:0006240!1.48e-23!39;UBERON:0004121!4.27e-22!102;UBERON:0000924!4.27e-22!102;UBERON:0006601!4.27e-22!102;UBERON:0002791!1.60e-20!29;UBERON:0003528!1.60e-20!29;UBERON:0001893!1.60e-20!29;UBERON:0000956!3.04e-15!21;UBERON:0001869!3.04e-15!21;UBERON:0000203!3.04e-15!21;UBERON:0007811!4.83e-15!86;UBERON:0000153!6.30e-14!94;UBERON:0002619!7.39e-12!17;UBERON:0002021!7.82e-11!10;UBERON:0000411!7.82e-11!10;UBERON:0001950!7.82e-11!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.01e-35,54;UBERON:0001049,1.40e-32,52;UBERON:0005068,1.40e-32,52;UBERON:0006241,1.40e-32,52;UBERON:0007135,1.40e-32,52;UBERON:0002020,1.75e-32,34;UBERON:0001017,4.08e-29,73;UBERON:0002346,1.57e-28,64;UBERON:0003075,1.57e-28,64;UBERON:0007284,1.57e-28,64;UBERON:0003080,2.03e-28,40;UBERON:0001016,6.68e-28,75;UBERON:0000955,1.41e-27,47;UBERON:0006238,1.41e-27,47;UBERON:0002780,3.10e-27,39;UBERON:0001890,3.10e-27,39;UBERON:0006240,3.10e-27,39;UBERON:0003528,4.56e-27,29;UBERON:0002791,4.56e-27,29;UBERON:0001893,4.56e-27,29;UBERON:0002616,1.56e-26,46;UBERON:0003056,4.84e-26,49;UBERON:0010371,3.87e-23,73;UBERON:0004121,2.95e-22,95;UBERON:0000924,2.95e-22,95;UBERON:0006601,2.95e-22,95;UBERON:0000956,4.36e-20,21;UBERON:0001869,4.36e-20,21;UBERON:0000203,4.36e-20,21;UBERON:0002619,1.34e-15,17;UBERON:0010314,2.47e-15,92;UBERON:0002021,8.65e-14,10;UBERON:0000411,8.65e-14,10;UBERON:0001950,8.65e-14,10;UBERON:0002420,5.09e-08,8;UBERON:0007245,5.09e-08,8;UBERON:0010009,5.09e-08,8;UBERON:0010011,5.09e-08,8;UBERON:0000454,5.09e-08,8;UBERON:0000025,1.27e-07,114;UBERON:0002240,4.86e-07,6;UBERON:0005174,4.86e-07,6;UBERON:0001137,4.86e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,5.28990979272033,6.33831403506179,0,0,0,0,0,0,0,11.3021677416241,12.5555522648472,9.67494822216357,6.28432165688368,6.40518768759679,8.45186514583183,4.60058260887535,10.1114066527102,5.50579404996943,8.81042632787795,5.83704826373725,6.59431438650969,4.66586982372289,4.16730696445408,2.79182999001381,6.19038871034848,4.27835093775068,11.490514833473,7.40332740155335,7.82877672466262,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,14.6794826616726,6.40500843946077,6.03140890141749,38.5889990826854,44.2387741181472,7.89594569326328,12.0058534670141,0.101839363850316,0,0,0.841767423545896,0.130120442962704,0.459804208866946,0.180062129805349,1.05493372485001,1.83698547708585,1.7935920839879,0.749613796477831,2.32833033665114,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,3.49875682089567,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,4.45404409050372,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,7.71171159412337,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,6.46835250932197,0.18006109403131,0,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,0.304464949114599,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,105.608594569391,116.001959599809,118.589371281955,95.2066630184029,78.7844897736239,97.4458127632714,68.8522950236442,63.9456108578393,63.4399372577886,74.5574848922621,0.103787347584177,0.798049746802062,1.02440163452481,2.91728060481953,0.628839487883947,0.551530525350042,3.11145418922261,4.32673620201678,2.56735367673452,2.77966932940177,4.56262739802432,3.77252682772152,2.99652823903624,3.71345883948242,3.27382173046996,2.85776214769844,2.78122382267653,2.89363830695558,2.88460130562315,2.35518272215036,3.77156177623957,3.01708870470874,2.86123427936785,4.0696996657052,3.57615645578256,3.04612588410035,3.47563148458268,2.36762740294059,3.39510284614654,3.92799590160417,3.6776855618494,3.25064791839359,2.04615521584845,3.40861050609125,3.08650577569826,4.49659040288303,0.935726433781634,2.14871054048298,0.956441660344217,0,0.695603506861264 | |||
|short_description=p7@Ptprd | |||
}} |
Revision as of 05:28, 14 September 2013
Short description: | p7@Ptprd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ptprd_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -19bp_to_ENSMUST00000138955, ENSMUST00000173592_5end |
EntrezGene: | Ptprd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.05e-23 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-23 | 23 |
neuron | 1.13e-13 | 33 |
neuronal stem cell | 1.13e-13 | 33 |
neuroblast | 1.13e-13 | 33 |
electrically signaling cell | 1.13e-13 | 33 |
electrically responsive cell | 1.90e-10 | 39 |
electrically active cell | 1.90e-10 | 39 |
neural cell | 7.91e-09 | 43 |
ectodermal cell | 1.79e-08 | 44 |
neurectodermal cell | 1.79e-08 | 44 |
neuron of cerebral cortex | 1.13e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.