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FFCP PHASE1:Mm9::chr7:31207408..31207450,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=243910|HGNC=|MCL_coexpression_id=7|UniProt=Q2TB02|association_with_transcript=0bp_to_ENSMUST00000108175_5end|description=CAGE_peak_4_at_Nfkbid_5end|id=chr7:31207408..31207450,+|ontology_enrichment_celltype=CL:0000988!1.32e-09!32;CL:0002032!1.32e-09!32;CL:0000037!1.32e-09!32;CL:0000566!1.32e-09!32;CL:0000837!1.32e-09!32;CL:0000738!1.84e-08!17;CL:0002087!1.84e-08!17;CL:0000838!1.18e-07!12;CL:0000542!2.94e-07!13;CL:0000051!2.94e-07!13;CL:0000791!5.05e-07!9;CL:0000789!5.05e-07!9;CL:0002420!5.05e-07!9;CL:0002419!5.05e-07!9;CL:0000790!5.05e-07!9;CL:0000084!5.56e-07!11;CL:0000827!5.56e-07!11;CL:0002031!7.27e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.39e-13,32;CL:0002032,1.39e-13,32;CL:0000037,1.39e-13,32;CL:0000837,1.39e-13,32;CL:0002320,2.72e-10,46;CL:0000134,2.72e-10,46;CL:0002031,4.31e-10,25;CL:0000738,7.48e-10,17;CL:0002087,7.48e-10,17;CL:0000791,2.62e-09,9;CL:0000789,2.62e-09,9;CL:0002420,2.62e-09,9;CL:0002419,2.62e-09,9;CL:0000790,2.62e-09,9;CL:0000838,3.88e-09,12;CL:0000624,1.85e-08,8;CL:0000084,3.33e-08,11;CL:0000827,3.33e-08,11;CL:0000542,4.11e-08,13;CL:0000051,4.11e-08,13;CL:0000219,6.07e-08,54;CL:0000049,6.51e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.38e-11!48;UBERON:0002390!2.60e-10!45;UBERON:0003061!2.60e-10!45;UBERON:0000064!7.02e-09!99;UBERON:0007811!3.10e-07!86;UBERON:0000153!6.11e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.44e-13,48;UBERON:0002405,2.44e-13,48;UBERON:0002390,8.23e-13,45;UBERON:0003061,8.23e-13,45;UBERON:0002384,2.72e-10,46;UBERON:0002371,1.29e-08,16;UBERON:0002370,1.85e-07,23;UBERON:0000974,1.85e-07,23;UBERON:0004807,1.85e-07,23;UBERON:0005058,1.85e-07,23;UBERON:0003351,1.85e-07,23;UBERON:0009113,1.85e-07,23;UBERON:0003295,1.85e-07,23;UBERON:0009722,1.85e-07,23;UBERON:0005562,1.85e-07,23;UBERON:0007690,1.85e-07,23;UBERON:0000072,1.94e-07,27;UBERON:0006562,6.49e-07,24;UBERON:0003408,6.49e-07,24;UBERON:0001557,6.49e-07,24;UBERON:0001042,6.49e-07,24;UBERON:0008814,6.49e-07,24;UBERON:0009145,6.49e-07,24;UBERON:0001474,7.72e-07,22;UBERON:0004765,7.72e-07,22;UBERON:0001434,7.72e-07,22|phase1_expression=1.60148847104794,1.39590163055744,1.36499771816861,1.51232105653415,3.50627010962443,0.671517087647559,0.233612640595526,5.4231795845462,150.503143980132,81.9225842126977,11.6428218393343,6.94017783259427,5.30722262786738,2.44777126773193,0.333109761815663,1.21485160433896,1.39912375625629,6.30924330716475,4.79900517620086,1.69755860719212,0.255129870453209,0.992909512008853,1.30599894569468,0.47997726838022,2.06468352960453,0.57423196411502,0.430761996159075,1.07735616342945,1.90023419456374,0.504060259519861,0.443461021310609,0,0,0,0,1.32987716286794,1.02084678131185,6.27797446105362,1.5626706890476,3.66466620781659,12.3528612486513,6.14740936462601,2.42755176515577,0,0,0,1.56478268869608,0,0.219686182734472,0.388859798148567,0.839918529752175,0,22.6506518177944,13.7818806982155,5.71359458542189,0.257259436035947,0.286533439938757,0,0.404632921719196,1.5869729378161,0.633831403506179,0.677689064138264,0,3.1496490104849,1.97773272513395,2.8419204597844,1.49800055259202,1.15265491596466,0.311068836925433,0.810035629990144,0.210324961351382,0.856952953211411,0.662605622854841,0.734944795289724,0.575072826109418,0,1.10115880999389,1.14918604276669,0.921639199537461,0.659431438650969,1.28082701043374,0,1.3959149950069,0.56276261003168,1.06958773443767,1.17851434189467,0.996601765593721,1.3047961207771,0.605809546665472,0.302286240427142,4.34796733052517,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,1.29894624606728,1.01343946190039,1.01104889002957,0.34255163915718,1.8125651855302,0.593768556259299,0.173485326766136,0,0.230615497256059,0.301445281105245,0.23517741427141,0.879666139307728,0.741584903203122,0.289198713839823,1.76922110389975,0.485300549842228,0.883366073841574,0.484875253135222,0,1.17112318804619,2.30391377494801,3.0654846625031,9.82484020948546,4.19931911695385,7.62421362438388,1.79748767285787,0.457500602818626,1.63350657746724,2.25971616249959,1.79000820131231,1.66230435647648,1.46017136760982,0.407357455401265,1.36847667671102,0.758168275301024,0.420883711772948,0.130120442962704,0.689706313300419,0.720248519221397,0.30140963567143,0.748401490664606,0.2562274405697,0.281105173679186,0.517406741478031,0.215567992932842,0.567318240503458,0.527853372491847,0.43839146485515,1.11218899690239,0.696504333044333,0.411564272815887,0.59710280045548,2.1066395619397,2.57347907114715,2.84163499395593,0.621377317606506,0.469052119962192,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0.841159794256509,1.02904612379284,4.62586296177317,1.58670339998127,0.639864751605702,0.928946687441754,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,1.89811624617805,0.658795818896044,0.251335208800269,0.795825888164603,1.36474860983384,3.59527763461689,1.08069024937347,0.796565093017469,0.189667900953082,0.228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|EntrezGene=243910
|HGNC=
|MCL_coexpression_id=7
|UniProt=Q2TB02
|association_with_transcript=0bp_to_ENSMUST00000108175_5end
|description=CAGE_peak_4_at_Nfkbid_5end
|id=chr7:31207408..31207450,+
|ontology_enrichment_celltype=CL:0000988!1.32e-09!32;CL:0002032!1.32e-09!32;CL:0000037!1.32e-09!32;CL:0000566!1.32e-09!32;CL:0000837!1.32e-09!32;CL:0000738!1.84e-08!17;CL:0002087!1.84e-08!17;CL:0000838!1.18e-07!12;CL:0000542!2.94e-07!13;CL:0000051!2.94e-07!13;CL:0000791!5.05e-07!9;CL:0000789!5.05e-07!9;CL:0002420!5.05e-07!9;CL:0002419!5.05e-07!9;CL:0000790!5.05e-07!9;CL:0000084!5.56e-07!11;CL:0000827!5.56e-07!11;CL:0002031!7.27e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000988,1.39e-13,32;CL:0002032,1.39e-13,32;CL:0000037,1.39e-13,32;CL:0000837,1.39e-13,32;CL:0002320,2.72e-10,46;CL:0000134,2.72e-10,46;CL:0002031,4.31e-10,25;CL:0000738,7.48e-10,17;CL:0002087,7.48e-10,17;CL:0000791,2.62e-09,9;CL:0000789,2.62e-09,9;CL:0002420,2.62e-09,9;CL:0002419,2.62e-09,9;CL:0000790,2.62e-09,9;CL:0000838,3.88e-09,12;CL:0000624,1.85e-08,8;CL:0000084,3.33e-08,11;CL:0000827,3.33e-08,11;CL:0000542,4.11e-08,13;CL:0000051,4.11e-08,13;CL:0000219,6.07e-08,54;CL:0000049,6.51e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!8.38e-11!48;UBERON:0002390!2.60e-10!45;UBERON:0003061!2.60e-10!45;UBERON:0000064!7.02e-09!99;UBERON:0007811!3.10e-07!86;UBERON:0000153!6.11e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.44e-13,48;UBERON:0002405,2.44e-13,48;UBERON:0002390,8.23e-13,45;UBERON:0003061,8.23e-13,45;UBERON:0002384,2.72e-10,46;UBERON:0002371,1.29e-08,16;UBERON:0002370,1.85e-07,23;UBERON:0000974,1.85e-07,23;UBERON:0004807,1.85e-07,23;UBERON:0005058,1.85e-07,23;UBERON:0003351,1.85e-07,23;UBERON:0009113,1.85e-07,23;UBERON:0003295,1.85e-07,23;UBERON:0009722,1.85e-07,23;UBERON:0005562,1.85e-07,23;UBERON:0007690,1.85e-07,23;UBERON:0000072,1.94e-07,27;UBERON:0006562,6.49e-07,24;UBERON:0003408,6.49e-07,24;UBERON:0001557,6.49e-07,24;UBERON:0001042,6.49e-07,24;UBERON:0008814,6.49e-07,24;UBERON:0009145,6.49e-07,24;UBERON:0001474,7.72e-07,22;UBERON:0004765,7.72e-07,22;UBERON:0001434,7.72e-07,22
|phase1_expression=1.60148847104794,1.39590163055744,1.36499771816861,1.51232105653415,3.50627010962443,0.671517087647559,0.233612640595526,5.4231795845462,150.503143980132,81.9225842126977,11.6428218393343,6.94017783259427,5.30722262786738,2.44777126773193,0.333109761815663,1.21485160433896,1.39912375625629,6.30924330716475,4.79900517620086,1.69755860719212,0.255129870453209,0.992909512008853,1.30599894569468,0.47997726838022,2.06468352960453,0.57423196411502,0.430761996159075,1.07735616342945,1.90023419456374,0.504060259519861,0.443461021310609,0,0,0,0,1.32987716286794,1.02084678131185,6.27797446105362,1.5626706890476,3.66466620781659,12.3528612486513,6.14740936462601,2.42755176515577,0,0,0,1.56478268869608,0,0.219686182734472,0.388859798148567,0.839918529752175,0,22.6506518177944,13.7818806982155,5.71359458542189,0.257259436035947,0.286533439938757,0,0.404632921719196,1.5869729378161,0.633831403506179,0.677689064138264,0,3.1496490104849,1.97773272513395,2.8419204597844,1.49800055259202,1.15265491596466,0.311068836925433,0.810035629990144,0.210324961351382,0.856952953211411,0.662605622854841,0.734944795289724,0.575072826109418,0,1.10115880999389,1.14918604276669,0.921639199537461,0.659431438650969,1.28082701043374,0,1.3959149950069,0.56276261003168,1.06958773443767,1.17851434189467,0.996601765593721,1.3047961207771,0.605809546665472,0.302286240427142,4.34796733052517,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,1.29894624606728,1.01343946190039,1.01104889002957,0.34255163915718,1.8125651855302,0.593768556259299,0.173485326766136,0,0.230615497256059,0.301445281105245,0.23517741427141,0.879666139307728,0.741584903203122,0.289198713839823,1.76922110389975,0.485300549842228,0.883366073841574,0.484875253135222,0,1.17112318804619,2.30391377494801,3.0654846625031,9.82484020948546,4.19931911695385,7.62421362438388,1.79748767285787,0.457500602818626,1.63350657746724,2.25971616249959,1.79000820131231,1.66230435647648,1.46017136760982,0.407357455401265,1.36847667671102,0.758168275301024,0.420883711772948,0.130120442962704,0.689706313300419,0.720248519221397,0.30140963567143,0.748401490664606,0.2562274405697,0.281105173679186,0.517406741478031,0.215567992932842,0.567318240503458,0.527853372491847,0.43839146485515,1.11218899690239,0.696504333044333,0.411564272815887,0.59710280045548,2.1066395619397,2.57347907114715,2.84163499395593,0.621377317606506,0.469052119962192,0,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0.841159794256509,1.02904612379284,4.62586296177317,1.58670339998127,0.639864751605702,0.928946687441754,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,1.89811624617805,0.658795818896044,0.251335208800269,0.795825888164603,1.36474860983384,3.59527763461689,1.08069024937347,0.796565093017469,0.189667900953082,0.228497025219458,1.1270773567308,0,0.581857461502877,0.350679099451593,0.569128834118316,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0.923765950833023,0.37898282354097,0.162964976442026,0.169745085775188,0,0.335012514883631,0.714130922658041,0.585400943573396,0.472905432318573,1.10732344824387,0.318909537314974,0.163863314715738,0.863424909329478,1.01254341007058,1.50791283939272,5.4390568381871,0.491764273019036,0.827810238914197,0.481651769963376,1.28932855251423,0,0,0,0,0,0,0.222798674082394,0,0,0,0,4.17717711348349,0.283880170416537,0.712262414669021,0.488660878060728,1.31976098378028,0,0.728341908464944,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,1.45413491791002,0.356497378384721,0.316036757935816,0,0,1.36175842301515,0.36012218806262,1.4229455216103,1.07168517515796,1.59606210278046,1.42695054081656,1.48094118541909,1.2178597964584,0.938686832254841,0.847328283455281,0.661585194164886,1.31909002353184,0.322928853391811,0.603129249281559,0.477489376012546,0.656563598980245,1.45740418314925,1.48340241608408,0.854354403989263,1.03193433981611,0.185194527369712,1.31857919903284,0.956859594047176,0.228778173206523,21.4172821792258,27.9902904647316,16.9985967779441,0.954670618015114,0.632671987162271,0,0.324016022465404,0.627264888043406,0.87345025498471,0.404593039154462,0.661227645802687,0.785267825952089,0.648074866458964,0,0.56369293868419,1.04661582230785,1.48912641411388,2.52786544847262,1.6790777052105,0.675824501963113,0,0.5208175393758,1.36317147753424,0.483168241652012,0.288030006257865,4.74016680942267,0.405450430580328,0.821687657318618,0.909445760844565,2.14832034800978,0.993406773906324,1.80293174279953,2.95379054349154,2.22126189885925,2.66723823292499,3.2264379243789,3.41102582589133,3.65604998233252,5.37633750035217,0.226730383615211,0.443971906748129,0.269141569828427,1.17519231454855,0.386379188064381,0.563047426353546,0.73260649706906,1.07184189539533,1.00314420807073,1.6942555278512,1.84130094602871,0.572895513439397,1.89038500578056,0.685082519770642,1.5107877947794,1.35004500046361,1.35096360967266,2.71885445390523,4.14208249401456,0.103787347584177,0,0.682934423016537,0.486213434136588,0.209613162627982,0.735374033800057,0.888986911206461,0.412070114477788,1.28367683836726,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.512201219238954,0.402048282689293,0.952587382566147,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.887379030796687,0.953744759789284,0.290692833264657,0.564656282491984,0.592302255241736,0.365855945745545,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0.463735671240843
|short_description=p4@Nfkbid
}}

Revision as of 13:12, 14 September 2013

Short description:p4@Nfkbid
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nfkbid_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_ENSMUST00000108175_5end
EntrezGene:Nfkbid
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nfkbid

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7150.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F281.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.94
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.65
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.62
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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