FFCP PHASE1:Mm9::chr10:76285563..76285576,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59093|HGNC=|MCL_coexpression_id=57|UniProt=G5E916,F7A4C5|association_with_transcript=-21bp_to_ENSMUST00000166520,ENSMUST00000168465,ENSMUST00000168505,uc007fuy.2_5end|description=CAGE_peak_2_at_Pcbp3_5end|id=chr10:76285563..76285576,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.08e-21!9;UBERON:0000019!1.08e-21!9;UBERON:0000047!1.08e-21!9;UBERON:0004088!1.08e-21!9;UBERON:0002104!1.08e-21!9;UBERON:0001456!1.08e-21!9;UBERON:0003072!1.08e-21!9;UBERON:0003071!1.08e-21!9;UBERON:0004128!1.08e-21!9;UBERON:0001444!2.16e-17!11;UBERON:0000020!8.84e-16!12;UBERON:0001032!8.84e-16!12;UBERON:0004456!8.84e-16!12;UBERON:0005085!2.05e-14!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.35e-57,9;UBERON:0000019,6.35e-57,9;UBERON:0000047,6.35e-57,9;UBERON:0010312,6.35e-57,9;UBERON:0004088,6.35e-57,9;UBERON:0002104,6.35e-57,9;UBERON:0001456,6.35e-57,9;UBERON:0003072,6.35e-57,9;UBERON:0004128,6.35e-57,9;UBERON:0003071,6.35e-57,9;UBERON:0001444,1.54e-46,11;UBERON:0000020,1.21e-42,12;UBERON:0001032,1.21e-42,12;UBERON:0004456,1.21e-42,12;UBERON:0000033,2.41e-39,13;UBERON:0005085,2.41e-39,13;UBERON:0007811,5.81e-14,36;UBERON:0000153,1.32e-11,43;UBERON:0003056,4.05e-10,49;UBERON:0002346,1.31e-07,64;UBERON:0003075,1.31e-07,64;UBERON:0007284,1.31e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.9237196482127,0.390361328888111,5.28774840196988,13.3245976055958,40.3888911799716,87.154755412851,114.661779654941,99.9797401052307,154.96331907267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.377252682772152,0.37456602987953,0.576226371643824,0.861532034334199,0.476293691283074,0.463537303779422,0.964546102318525,0,0.735994600671987,0.342869252385415,0.70990322463735,0.715308569841963,0,0.470546902076653,0.592302255241736,0.73171189149109,1.31534855718921,0.814824683075171,0,0.593175090620871,0.197008964751127,0.818462086339379,0.77468420592983,1.15743966588685,0.749431733813838,0.701794825336225,1.93383948643468,0,0,0|short_description=p2@Pcbp3}} | ||
|EntrezGene=59093 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|UniProt=G5E916,F7A4C5 | |||
|association_with_transcript=-21bp_to_ENSMUST00000166520,ENSMUST00000168465,ENSMUST00000168505,uc007fuy.2_5end | |||
|description=CAGE_peak_2_at_Pcbp3_5end | |||
|id=chr10:76285563..76285576,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.08e-21!9;UBERON:0000019!1.08e-21!9;UBERON:0000047!1.08e-21!9;UBERON:0004088!1.08e-21!9;UBERON:0002104!1.08e-21!9;UBERON:0001456!1.08e-21!9;UBERON:0003072!1.08e-21!9;UBERON:0003071!1.08e-21!9;UBERON:0004128!1.08e-21!9;UBERON:0001444!2.16e-17!11;UBERON:0000020!8.84e-16!12;UBERON:0001032!8.84e-16!12;UBERON:0004456!8.84e-16!12;UBERON:0005085!2.05e-14!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.35e-57,9;UBERON:0000019,6.35e-57,9;UBERON:0000047,6.35e-57,9;UBERON:0010312,6.35e-57,9;UBERON:0004088,6.35e-57,9;UBERON:0002104,6.35e-57,9;UBERON:0001456,6.35e-57,9;UBERON:0003072,6.35e-57,9;UBERON:0004128,6.35e-57,9;UBERON:0003071,6.35e-57,9;UBERON:0001444,1.54e-46,11;UBERON:0000020,1.21e-42,12;UBERON:0001032,1.21e-42,12;UBERON:0004456,1.21e-42,12;UBERON:0000033,2.41e-39,13;UBERON:0005085,2.41e-39,13;UBERON:0007811,5.81e-14,36;UBERON:0000153,1.32e-11,43;UBERON:0003056,4.05e-10,49;UBERON:0002346,1.31e-07,64;UBERON:0003075,1.31e-07,64;UBERON:0007284,1.31e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.9237196482127,0.390361328888111,5.28774840196988,13.3245976055958,40.3888911799716,87.154755412851,114.661779654941,99.9797401052307,154.96331907267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.377252682772152,0.37456602987953,0.576226371643824,0.861532034334199,0.476293691283074,0.463537303779422,0.964546102318525,0,0.735994600671987,0.342869252385415,0.70990322463735,0.715308569841963,0,0.470546902076653,0.592302255241736,0.73171189149109,1.31534855718921,0.814824683075171,0,0.593175090620871,0.197008964751127,0.818462086339379,0.77468420592983,1.15743966588685,0.749431733813838,0.701794825336225,1.93383948643468,0,0,0 | |||
|short_description=p2@Pcbp3 | |||
}} |
Revision as of 17:25, 12 September 2013
Short description: | p2@Pcbp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcbp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | -21bp_to_ENSMUST00000166520, ENSMUST00000168465, ENSMUST00000168505, uc007fuy.2_5end |
EntrezGene: | Pcbp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 6.35e-57 | 9 |
camera-type eye | 6.35e-57 | 9 |
simple eye | 6.35e-57 | 9 |
immature eye | 6.35e-57 | 9 |
ocular region | 6.35e-57 | 9 |
visual system | 6.35e-57 | 9 |
face | 6.35e-57 | 9 |
optic cup | 6.35e-57 | 9 |
optic vesicle | 6.35e-57 | 9 |
eye primordium | 6.35e-57 | 9 |
subdivision of head | 1.54e-46 | 11 |
sense organ | 1.21e-42 | 12 |
sensory system | 1.21e-42 | 12 |
entire sense organ system | 1.21e-42 | 12 |
head | 2.41e-39 | 13 |
ectodermal placode | 2.41e-39 | 13 |
craniocervical region | 5.81e-14 | 36 |
anterior region of body | 1.32e-11 | 43 |
pre-chordal neural plate | 4.05e-10 | 49 |
neurectoderm | 1.31e-07 | 64 |
neural plate | 1.31e-07 | 64 |
presumptive neural plate | 1.31e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.