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FFCP PHASE1:Mm9::chr4:44769481..44769554,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=319885|HGNC=|MCL_coexpression_id=317|UniProt=E0CY20,E9Q193|association_with_transcript=0bp_to_ENSMUST00000142714,ENSMUST00000143385,uc012ddi.1_5end|description=CAGE_peak_1_at_Zcchc7_5end|id=chr4:44769481..44769554,+|ontology_enrichment_celltype=CL:0000838!9.05e-09!12;CL:0000084!4.09e-08!11;CL:0000827!4.09e-08!11;CL:0000542!1.16e-07!13;CL:0000051!1.16e-07!13;CL:0000791!3.02e-07!9;CL:0000789!3.02e-07!9;CL:0002420!3.02e-07!9;CL:0002419!3.02e-07!9;CL:0000790!3.02e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,9.05e-09,12;CL:0000084,4.09e-08,11;CL:0000827,4.09e-08,11;CL:0000542,1.16e-07,13;CL:0000051,1.16e-07,13;CL:0000791,3.02e-07,9;CL:0000789,3.02e-07,9;CL:0002420,3.02e-07,9;CL:0002419,3.02e-07,9;CL:0000790,3.02e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!2.32e-10!126;UBERON:0004185!2.32e-10!126;UBERON:0004119!3.20e-10!130;UBERON:0000925!3.20e-10!130;UBERON:0006595!3.20e-10!130;UBERON:0001007!3.40e-10!128;UBERON:0001555!3.40e-10!128;UBERON:0007026!3.40e-10!128;UBERON:0001004!6.73e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.30e-09,114;UBERON:0004119,1.87e-09,118;UBERON:0000925,1.87e-09,118;UBERON:0006595,1.87e-09,118;UBERON:0001007,1.94e-09,116;UBERON:0001555,1.94e-09,116;UBERON:0007026,1.94e-09,116;UBERON:0000077,3.13e-07,35;UBERON:0001004,6.73e-07,42|phase1_expression=13.9329496981171,31.4077866875425,29.1199513209303,32.061206398524,42.0752413154932,34.9188885576731,42.9847258695767,63.1413051629308,59.2720520258517,62.9633575806162,76.3632138285752,63.6581828782785,90.736386863539,77.5418969456507,22.9845735652807,36.040597595389,17.4890469532037,79.654196752955,91.0439839142105,83.1803717524139,28.4895022006084,39.0213438219479,43.8815645753411,22.8789164594572,25.0056116363215,22.3950466004858,18.9535278309993,33.6135122989987,15.3918969759663,18.9022597319948,18.4036323843903,20.9560122241678,12.916360539276,0,41.5946332441835,31.2521133273966,41.6505486775233,33.4825304589526,30.4720784364282,38.7407570540611,31.1762688656438,33.4692287629638,22.3334762394331,24.1721890513108,27.980033016586,23.6775310288569,7.82391344348039,3.48840250208714,2.19686182734472,6.61061656852564,4.05960622713551,1.43752564364972,63.7573903019398,49.3246256567714,52.4306326662244,14.663787854049,19.7708073557742,16.5015069528782,5.66486090406874,4.23192783417626,5.07065122804943,4.74382344896785,3.55717918444456,4.49949858640699,2.96659908770092,3.5524005747305,3.59520132622086,3.45796474789399,10.0578923939223,7.2903206699113,6.94072372459561,9.99778445413313,8.39300455616131,8.32937434661688,6.61333750025831,2.75765635983006,17.6185409599022,32.6879585498081,25.0378649207677,7.64940468835124,7.31901148819277,10.939180781692,9.49222196604695,23.0732670112989,25.8229038742809,12.6690291753677,19.5049202694771,12.1159639786445,19.0830007199624,22.7470395921424,57.9728977403356,32.6961073252927,12.9194553404473,14.5719861742211,28.5901623676974,32.7059627581055,18.3982190372595,18.0656141932741,16.1067322853779,13.7802434059033,14.2251853974447,17.9657068380045,40.7688383530633,0,19.0512116089868,15.9616715249312,18.704404465547,26.0339245759457,164.425556115954,29.0946592567057,13.0113995074602,11.8741536541735,13.3756988408514,17.182381022999,28.3388784197049,19.1013218821107,26.9442514830468,38.8972270114562,24.7690954545965,27.0150639412173,29.8136049921531,32.4866419600599,41.0061874679869,36.0120380324203,32.4642395560855,29.8884754594052,25.2809912707492,16.7972764678154,20.9665874670557,23.0677584683427,28.3650373747548,8.92145900001337,29.3763101124947,38.1016031422192,24.3112012134685,28.5544622999253,20.8770695893148,27.8671614166608,47.0064330686635,34.0915806536088,16.9156575851515,11.2652031172402,18.9065236295617,26.0719334855787,25.9219061766559,30.3629517075094,21.2702914750584,31.3031078594209,5.6047678162539,17.5868654556072,18.6508191613786,15.1245055375027,27.5266776733342,30.2979384874285,31.2788847340074,19.7043924150308,22.4708219940235,20.8451804762919,19.8914449576915,19.8840741634082,18.2930326785255,15.1252131627252,17.0456209621351,21.447301260467,18.9748548851475,17.9051137457814,19.3156849007726,20.7842309413562,18.9243827400503,30.3709808546326,24.3206428637567,21.0527981892479,27.0046641807992,18.9231050452124,33.6463917702604,15.2298826321341,47.9107235326507,26.4450566663544,18.3427895460301,26.47498059209,31.0570581786245,30.050845168878,29.7986578752126,24.3488801424076,30.8443890003933,24.5401442538776,33.4275827704358,33.4246873029133,36.2633202041563,38.6492345721315,35.6627782293245,34.2522989997512,7.96605184002943,22.0499629336777,18.0332377076929,25.6600673085096,19.0073437424273,25.108623520734,26.4328725179395,24.9461150085528,23.0788129926821,19.3733547357227,25.791378556582,20.5219480030796,15.7247196090562,21.586762788946,16.8373900752457,18.0882869814313,13.4951701444152,19.2756412092043,30.8056930872567,20.5921059891061,43.1304619582064,24.9334434937897,23.7148631567066,2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|EntrezGene=319885
|HGNC=
|MCL_coexpression_id=317
|UniProt=E0CY20,E9Q193
|association_with_transcript=0bp_to_ENSMUST00000142714,ENSMUST00000143385,uc012ddi.1_5end
|description=CAGE_peak_1_at_Zcchc7_5end
|id=chr4:44769481..44769554,+
|ontology_enrichment_celltype=CL:0000838!9.05e-09!12;CL:0000084!4.09e-08!11;CL:0000827!4.09e-08!11;CL:0000542!1.16e-07!13;CL:0000051!1.16e-07!13;CL:0000791!3.02e-07!9;CL:0000789!3.02e-07!9;CL:0002420!3.02e-07!9;CL:0002419!3.02e-07!9;CL:0000790!3.02e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,9.05e-09,12;CL:0000084,4.09e-08,11;CL:0000827,4.09e-08,11;CL:0000542,1.16e-07,13;CL:0000051,1.16e-07,13;CL:0000791,3.02e-07,9;CL:0000789,3.02e-07,9;CL:0002420,3.02e-07,9;CL:0002419,3.02e-07,9;CL:0000790,3.02e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004921!2.32e-10!126;UBERON:0004185!2.32e-10!126;UBERON:0004119!3.20e-10!130;UBERON:0000925!3.20e-10!130;UBERON:0006595!3.20e-10!130;UBERON:0001007!3.40e-10!128;UBERON:0001555!3.40e-10!128;UBERON:0007026!3.40e-10!128;UBERON:0001004!6.73e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.30e-09,114;UBERON:0004119,1.87e-09,118;UBERON:0000925,1.87e-09,118;UBERON:0006595,1.87e-09,118;UBERON:0001007,1.94e-09,116;UBERON:0001555,1.94e-09,116;UBERON:0007026,1.94e-09,116;UBERON:0000077,3.13e-07,35;UBERON:0001004,6.73e-07,42
|phase1_expression=13.9329496981171,31.4077866875425,29.1199513209303,32.061206398524,42.0752413154932,34.9188885576731,42.9847258695767,63.1413051629308,59.2720520258517,62.9633575806162,76.3632138285752,63.6581828782785,90.736386863539,77.5418969456507,22.9845735652807,36.040597595389,17.4890469532037,79.654196752955,91.0439839142105,83.1803717524139,28.4895022006084,39.0213438219479,43.8815645753411,22.8789164594572,25.0056116363215,22.3950466004858,18.9535278309993,33.6135122989987,15.3918969759663,18.9022597319948,18.4036323843903,20.9560122241678,12.916360539276,0,41.5946332441835,31.2521133273966,41.6505486775233,33.4825304589526,30.4720784364282,38.7407570540611,31.1762688656438,33.4692287629638,22.3334762394331,24.1721890513108,27.980033016586,23.6775310288569,7.82391344348039,3.48840250208714,2.19686182734472,6.61061656852564,4.05960622713551,1.43752564364972,63.7573903019398,49.3246256567714,52.4306326662244,14.663787854049,19.7708073557742,16.5015069528782,5.66486090406874,4.23192783417626,5.07065122804943,4.74382344896785,3.55717918444456,4.49949858640699,2.96659908770092,3.5524005747305,3.59520132622086,3.45796474789399,10.0578923939223,7.2903206699113,6.94072372459561,9.99778445413313,8.39300455616131,8.32937434661688,6.61333750025831,2.75765635983006,17.6185409599022,32.6879585498081,25.0378649207677,7.64940468835124,7.31901148819277,10.939180781692,9.49222196604695,23.0732670112989,25.8229038742809,12.6690291753677,19.5049202694771,12.1159639786445,19.0830007199624,22.7470395921424,57.9728977403356,32.6961073252927,12.9194553404473,14.5719861742211,28.5901623676974,32.7059627581055,18.3982190372595,18.0656141932741,16.1067322853779,13.7802434059033,14.2251853974447,17.9657068380045,40.7688383530633,0,19.0512116089868,15.9616715249312,18.704404465547,26.0339245759457,164.425556115954,29.0946592567057,13.0113995074602,11.8741536541735,13.3756988408514,17.182381022999,28.3388784197049,19.1013218821107,26.9442514830468,38.8972270114562,24.7690954545965,27.0150639412173,29.8136049921531,32.4866419600599,41.0061874679869,36.0120380324203,32.4642395560855,29.8884754594052,25.2809912707492,16.7972764678154,20.9665874670557,23.0677584683427,28.3650373747548,8.92145900001337,29.3763101124947,38.1016031422192,24.3112012134685,28.5544622999253,20.8770695893148,27.8671614166608,47.0064330686635,34.0915806536088,16.9156575851515,11.2652031172402,18.9065236295617,26.0719334855787,25.9219061766559,30.3629517075094,21.2702914750584,31.3031078594209,5.6047678162539,17.5868654556072,18.6508191613786,15.1245055375027,27.5266776733342,30.2979384874285,31.2788847340074,19.7043924150308,22.4708219940235,20.8451804762919,19.8914449576915,19.8840741634082,18.2930326785255,15.1252131627252,17.0456209621351,21.447301260467,18.9748548851475,17.9051137457814,19.3156849007726,20.7842309413562,18.9243827400503,30.3709808546326,24.3206428637567,21.0527981892479,27.0046641807992,18.9231050452124,33.6463917702604,15.2298826321341,47.9107235326507,26.4450566663544,18.3427895460301,26.47498059209,31.0570581786245,30.050845168878,29.7986578752126,24.3488801424076,30.8443890003933,24.5401442538776,33.4275827704358,33.4246873029133,36.2633202041563,38.6492345721315,35.6627782293245,34.2522989997512,7.96605184002943,22.0499629336777,18.0332377076929,25.6600673085096,19.0073437424273,25.108623520734,26.4328725179395,24.9461150085528,23.0788129926821,19.3733547357227,25.791378556582,20.5219480030796,15.7247196090562,21.586762788946,16.8373900752457,18.0882869814313,13.4951701444152,19.2756412092043,30.8056930872567,20.5921059891061,43.1304619582064,24.9334434937897,23.7148631567066,28.2888343300765,17.9397413521912,21.7099584613515,38.0591571743206,12.3169417650815,21.5113768903474,19.6904299499218,31.4484932706593,32.9987327160377,29.2793678289797,37.4656603886974,41.1427726117158,38.5348559988868,38.9069635524269,50.7976275618788,42.6531905208762,38.0427024069375,24.1266054302836,22.8440387203858,39.3411418415229,43.8739426624525,22.4770825982909,27.7791697223522,10.3279015587306,19.1877904675323,16.0909191902291,19.5219372148319,23.9119971483407,21.7461606136822,28.0726329343817,26.3261173633614,24.2886421004937,25.7185154961954,31.6230222357219,32.4534529586025,36.9044221541498,9.79360820169904,19.8722090411363,46.6865448012275,31.8588332015911,17.9657670754686,17.5347663039556,28.6679721228965,13.2885851796348,26.7468578711217,36.4383893367192,36.7169066772281,31.7282666762402,45.8253299006933,26.3546521437497,36.0974401368654,44.9380279595,18.3662315911936,5.43306471887569,13.5032332069903,24.8276327099183,18.3719882130133,17.1130981426206,11.2652031172402,28.395276675709,24.5725202202031,32.1971461160244,62.162117358938,39.397320113801,39.4446529030139,32.7080222568594,46.6160155275974,40.5158362915492,21.3239097312086,33.4906926363791,14.6534676253888,22.9641213938442,31.2691638627787,45.9292605142645,41.6376275235871,28.0464409489861,27.7103875600843,23.6321955205565,16.2294005062569,12.0207677560831,32.9377536745495,33.3736503139366,28.4360082579677,30.1340337969725,33.7160865962052,33.7226099359371,23.2962788365786,31.2372085633221,46.6004484815194,3.94585057078933,19.8857006238492,14.8912641411388,16.7228021975881,14.8533796999391,25.1744626981259,31.9211689116451,34.8947751381786,42.1534564591358,36.2376181239009,32.8354207133967,36.9733011134969,8.31173382689673,18.1798394181744,28.3227394091593,34.0150721768215,31.5903354102211,36.4192212045506,35.297796994724,43.8194392774961,32.3878928283749,39.221386018231,44.2458778558476,46.8551668788404,47.6857760900801,31.5155233225144,14.8730588760623,26.7347292696238,20.3140385800535,38.2515396183737,35.2843053848222,42.3080252057382,39.4437817505481,44.138345155112,41.2268845110459,37.7466693935885,37.2382083735608,35.5736087451433,23.2928056722018,20.3956352295219,33.7511250115903,31.5224842256954,28.5479717660049,28.4768171463501,7.68026372122907,15.1629451892392,15.8782253351345,26.0124187263075,11.1094976192831,9.19217542250071,24.8916335137809,22.6638562962784,18.9342333659171,22.9954462705056,26.3618471885849,26.7849404768228,30.8080559575913,29.9637713254788,28.0285088503393,24.7672719467198,22.5974435592468,26.2356539830639,25.549325849805,23.5518272215036,22.286501405052,22.8943789945545,28.1354704137839,29.0692833264657,28.5151422658452,26.3997576622031,21.9513567447327,31.3052956611033,27.8398433384017,20.7622640513363,25.3878938785733,26.7932192061533,21.6892452879935,26.9590103663581,23.9204197616615,11.4912865851455,24.3288872783225,23.6358159453128,25.4413481651562,22.7209161693101,22.2593122195605
|short_description=p1@Zcchc7
}}

Revision as of 05:04, 14 September 2013

Short description:p1@Zcchc7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zcchc7_5end
Coexpression cluster:MCL_coexpression_mm9:317
Association with transcript: 0bp_to_ENSMUST00000142714, ENSMUST00000143385, uc012ddi.1_5end
EntrezGene:Zcchc7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zcchc7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I531.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.06
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.92
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I842.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E963.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E759.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F262.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E676.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F163.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E490.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E877.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A517.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A279.65
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A491.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A683.18
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H239.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I943.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.01
GP2+ M cell, pool1.CNhs13228.11845-124H922.40
GP2+ M cell, pool2.CNhs13231.11846-124I118.95
GP2+ M cell, pool3.CNhs13240.11847-124I233.61
Ileum epithelium, pool1.CNhs13199.10252-104B915.39
Ileum epithelium, pool2.CNhs13232.10253-104C118.90
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F541.59
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.25
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F741.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G833.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H130.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H338.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G931.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H233.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A263.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I949.32
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A152.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.04
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D919.08
Mouse Schwann, donor2.CNhs12573.11746-123F922.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.57
Mouse hepatocyte, donor6.CNhs13090.11822-124F428.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F632.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.78
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.03
accessory axillary lymph node, adult.CNhs10475.1063-29H9164.43
adrenal gland, adult.CNhs10508.49-24D729.09
adrenal gland, embryo E14.CNhs11038.406-44C513.01
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F517.18
adrenal gland, neonate N00.CNhs11191.1311-23C128.34
adrenal gland, neonate N25.CNhs11223.1377-27I319.10
amnion, adult pregnant day17.5.CNhs10488.583-22A826.94
aorta, adult.CNhs10498.46-23H138.90
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F527.02
bone (os femoris), neonate N16.CNhs11225.1525-43A629.81
bone (os femoris), neonate N20.CNhs11195.1350-25C332.49
cecum, adult.CNhs10467.37-13H441.01
cerebellum, adult.CNhs10494.15-8B236.01
cerebellum, neonate N30.CNhs11135.1395-42I232.46
colon, adult.CNhs10468.36-18H729.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.97
corpora quadrigemina, adult.CNhs10501.16-22A423.07
corpus striatum, adult.CNhs10487.19-21D828.37
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D529.38
cortex, neonate N30.CNhs11107.1392-42F238.10
diencephalon, adult.CNhs10482.20-12F224.31
diencephalon, neonate N30.CNhs11201.1388-42B228.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.87
epididymis, adult.CNhs10490.58-23B247.01
eyeball, adult.CNhs10484.31-12G434.09
eyeball, embryo E12.CNhs11016.345-16C616.92
eyeball, embryo E14.CNhs10521.399-16E211.27
eyeball, embryo E15.CNhs10593.426-16C918.91
eyeball, embryo E17.CNhs11023.1261-18D426.07
eyeball, neonate N00.CNhs11207.633-15C625.92
eyeball, neonate N01.CNhs11140.1532-43E730.36
eyeball, neonate N02.CNhs11205.1551-44G821.27
eyeball, neonate N16.CNhs11188.777-19A231.30
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H217.59
forelimb, embryo E13.CNhs10589.384-1E218.65
forelimb, embryo E14.CNhs10577.413-26A815.12
forelimb, embryo E15.CNhs11007.437-20E727.53
forelimb, embryo E17.CNhs10598.1517-43C430.30
forelimb, embryo E18.CNhs11008.1520-43B531.28
gonad, embryo E13.CNhs11044.1564-45I619.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C822.47
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.85
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.89
heart, embryo E11.CNhs10586.331-24E919.88
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I915.13
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C821.45
heart, embryo E16.CNhs11021.457-17C618.97
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E320.78
heart, neonate N03.CNhs11221.1349-25I218.92
heart, neonate N10.CNhs11118.749-24G130.37
heart, neonate N16.CNhs11209.782-15G124.32
heart, neonate N20.CNhs11127.821-26I621.05
heart, neonate N25.CNhs11196.1351-25D327.00
heart, neonate N30.CNhs11202.1390-42D218.92
hippocampus, adult.CNhs10478.13-16E833.65
hippocampus, neonate N00.CNhs11228.627-43G115.23
intestinal mucosa, adult.CNhs10506.860-29I347.91
intestine, adult.CNhs10496.178-9A326.45
intestine, embryo E12.CNhs11019.1251-16I518.34
intestine, embryo E13.CNhs11010.381-16D526.47
intestine, embryo E15.CNhs10602.976-16D831.06
intestine, embryo E16.CNhs10585.463-22H430.05
intestine, embryo E17.CNhs10582.482-18D329.80
intestine, embryo E18.CNhs10526.1289-20F724.35
intestine, neonate N00.CNhs11126.644-26D130.84
intestine, neonate N01.CNhs11192.1322-23E924.54
intestine, neonate N06.CNhs11102.688-20B833.43
intestine, neonate N07.CNhs11095.720-20F233.42
intestine, neonate N10.CNhs11098.755-23A536.26
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E335.66
intestine, neonate N30.CNhs11131.1384-42G134.25
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F822.05
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I225.66
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G725.11
kidney, neonate N10.CNhs11206.758-6D526.43
kidney, neonate N20.CNhs11113.832-19I124.95
kidney, neonate N25.CNhs11122.1353-25F323.08
kidney, neonate N30.CNhs11203.1385-42H119.37
liver, adult pregnant day01.CNhs10466.508-5B225.79
liver, embryo E12.CNhs10601.355-15F820.52
liver, embryo E13.CNhs10524.378-3H615.72
liver, embryo E14.CNhs10594.409-16E121.59
liver, embryo E15.CNhs10520.433-16D716.84
liver, embryo E16.CNhs10523.462-17F518.09
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G419.28
liver, neonate N00.CNhs11117.641-24F430.81
liver, neonate N03.CNhs11123.1345-25G220.59
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H224.93
liver, neonate N10.CNhs11115.751-24B923.71
liver, neonate N20.CNhs11220.823-25A328.29
liver, neonate N25.CNhs11198.1368-26H117.94
liver, neonate N30.CNhs11106.1382-42D121.71
lung, adult.CNhs10474.28-22B138.06
lung, embryo E12.CNhs10522.354-16G212.32
lung, embryo E14.CNhs10604.404-26F821.51
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B631.45
lung, embryo E17.CNhs10605.480-44A633.00
lung, embryo E18.CNhs10583.1287-20I629.28
lung, neonate N00.CNhs11224.640-42C637.47
lung, neonate N06.CNhs11212.683-20E541.14
lung, neonate N07.CNhs11111.715-19A338.53
lung, neonate N10.CNhs11219.750-23E638.91
lung, neonate N20.CNhs11109.822-18A450.80
lung, neonate N25.CNhs11119.1359-25C742.65
lung, neonate N30.CNhs11133.1394-42H238.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.84
mammary gland, adult lactating day02.CNhs10480.595-22B639.34
mammary gland, adult pregnant day19.CNhs10476.588-5H243.87
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A327.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.07
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.62
olfactory brain, adult.CNhs10489.18-22I932.45
ovary, adult.CNhs10507.91-2I736.90
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I419.87
oviduct, adult pregnant day01.CNhs10500.988-6G646.69
pancreas, adult.CNhs10486.34-16E431.86
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F217.53
pancreas, embryo E16.CNhs11003.460-26E528.67
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I726.75
pancreas, neonate N00.CNhs11105.645-26G936.44
pancreas, neonate N01.CNhs11138.1531-43D736.72
pancreas, neonate N02.CNhs11139.1539-43D831.73
pancreas, neonate N16.CNhs11136.787-43B645.83
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H536.10
pituitary gland, adult.CNhs10493.21-1G844.94
pituitary gland, embryo E12.CNhs11018.346-16E618.37
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B924.83
pituitary gland, embryo E16.CNhs11036.449-43F618.37
pituitary gland, embryo E17.CNhs11039.1265-44F517.11
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I728.40
placenta, adult pregnant day17.CNhs10464.577-18G324.57
prostate, adult.CNhs10470.859-1F832.20
skin, adult.CNhs10492.30-1C362.16
skin, neonate N00.CNhs11124.650-25G439.40
skin, neonate N03.CNhs11215.662-22H339.44
skin, neonate N06.CNhs11097.693-20I532.71
skin, neonate N10.CNhs11108.762-6C446.62
small intestine, neonate N16.CNhs11114.790-21I140.52
spinal cord, adult.CNhs10505.24-13C921.32
spleen, adult.CNhs10465.25-2G233.49
spleen, embryo E16.CNhs11035.461-43C114.65
spleen, embryo E18.CNhs11011.1271-21F222.96
spleen, neonate N10.CNhs11116.752-24D131.27
spleen, neonate N20.CNhs11112.824-19H145.93
spleen, neonate N25.CNhs11099.1354-25G341.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.63
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E312.02
stomach, embryo E15.CNhs10603.1252-16G832.94
stomach, embryo E16.CNhs11022.459-17D433.37
stomach, embryo E17.CNhs11006.1035-18D528.44
stomach, embryo E18.CNhs10999.1286-20C630.13
stomach, neonate N03.CNhs11193.1340-24B833.72
stomach, neonate N07.CNhs11210.718-18A933.72
stomach, neonate N25.CNhs11104.1355-25E423.30
stomach, neonate N30.CNhs11134.1386-42I131.24
submandibular gland, adult.CNhs10469.59-29C146.60
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F519.89
testis, embryo E15.CNhs11034.443-27C514.89
testis, embryo E16.CNhs11033.470-26G516.72
testis, embryo E17.CNhs11029.486-18I514.85
testis, embryo E18.CNhs11027.503-18G525.17
testis, neonate N00.CNhs11189.1300-22B731.92
testis, neonate N07.CNhs11222.726-26I434.89
testis, neonate N10.CNhs11204.763-44D942.15
testis, neonate N20.CNhs11110.839-18H336.24
testis, neonate N30.CNhs11130.1391-42E232.84
thymus, adult.CNhs10471.38-12B536.97
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I218.18
thymus, embryo E16.CNhs11002.456-26C528.32
thymus, embryo E17.CNhs10581.478-18C134.02
thymus, embryo E18.CNhs10595.1273-19G431.59
thymus, neonate N02.CNhs11181.1541-43F836.42
thymus, neonate N03.CNhs11137.2104-43C735.30
thymus, neonate N06.CNhs11197.681-26C443.82
thymus, neonate N07.CNhs11211.713-19D332.39
thymus, neonate N10.CNhs11194.748-24E439.22
thymus, neonate N20.CNhs11186.820-7A244.25
thymus, neonate N25.CNhs11125.1362-25G746.86
thymus, neonate N30.CNhs11132.1393-42G247.69
tongue, adult.CNhs10499.32-1B431.52
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F726.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.31
urinary bladder, adult.CNhs10481.879-12E438.25
uterus, adult pregnant day19.CNhs10497.590-15F535.28
uterus, adult.CNhs10509.92-27E542.31
vagina, adult.CNhs10502.89-27D539.44
vesicular gland, adult.CNhs10491.51-27F844.14
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.48
whole body, embryo E11.CNhs11014.324-5I87.68
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D226.01
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.55
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G531.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.96
whole body, embryo E17.5.CNhs10513.490-9F923.92
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B324.33
whole body, neonate N00.CNhs10525.657-19C223.64
whole body, neonate N01.CNhs10576.659-23C625.44
whole body, neonate N06.CNhs10515.692-21D122.72
whole body, neonate N10.CNhs10518.761-6B422.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell9.05e-0912
T cell4.09e-0811
pro-T cell4.09e-0811
lymphocyte1.16e-0713
common lymphoid progenitor1.16e-0713
mature alpha-beta T cell3.02e-079
alpha-beta T cell3.02e-079
immature T cell3.02e-079
mature T cell3.02e-079
immature alpha-beta T cell3.02e-079

Uber anatomy
Ontology termp-valuen
subdivision of digestive tract1.30e-09114
endoderm-derived structure1.87e-09118
endoderm1.87e-09118
presumptive endoderm1.87e-09118
digestive system1.94e-09116
digestive tract1.94e-09116
primitive gut1.94e-09116
mixed endoderm/mesoderm-derived structure3.13e-0735
respiratory system6.73e-0742







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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