FFCP PHASE1:Mm9::chr8:107365938..107365944,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:107365938..107365944,+|id=chr8:107365938..107365944,+|ontology_enrichment_celltype=CL:0000239!1.67e-32!6;CL:0000677!1.67e-32!6;CL:0000212!1.67e-32!6;CL:0000584!1.67e-32!6;CL:0002563!6.44e-29!9;CL:0002251!6.44e-29!9;CL:0000075!8.03e-28!7;CL:0000066!3.54e-20!25;CL:0002076!4.12e-17!15;CL:0000473!2.46e-16!3;CL:0000627!2.46e-16!3;CL:0000682!2.46e-16!3;CL:0000223!1.14e-12!20;CL:0000063!8.73e-07!66|ontology_enrichment_celltype_v019_2=CL:0000239,2.53e-52,6;CL:0000677,2.53e-52,6;CL:0000584,2.53e-52,6;CL:0000075,6.09e-45,7;CL:0002563,4.33e-35,9;CL:0002251,4.33e-35,9;CL:0002076,2.92e-21,15;CL:0000066,2.79e-18,25;CL:0000223,4.71e-16,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.84e-34!15;UBERON:0003350!6.44e-29!9;UBERON:0004808!6.44e-29!9;UBERON:0001277!6.44e-29!9;UBERON:0001242!9.36e-26!13;UBERON:0000060!9.36e-26!13;UBERON:0001262!9.36e-26!13;UBERON:0004786!9.36e-26!13;UBERON:0000485!1.48e-23!11;UBERON:0004923!7.07e-21!24;UBERON:0000160!1.75e-13!43;UBERON:0001962!6.18e-11!2;UBERON:0001961!6.18e-11!2;UBERON:0001744!6.18e-11!2;UBERON:0005409!2.11e-09!59;UBERON:0002465!1.39e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.33e-35,9;UBERON:0004808,4.33e-35,9;UBERON:0001277,4.33e-35,9;UBERON:0000485,8.23e-29,11;UBERON:0001242,1.86e-24,13;UBERON:0001262,1.86e-24,13;UBERON:0004786,1.86e-24,13;UBERON:0000344,2.92e-21,15;UBERON:0000160,9.44e-15,31;UBERON:0004923,1.93e-13,24;UBERON:0005409,8.37e-10,47|phase1_expression=0,3.14077866875425,2.27499619694768,9.37639055051173,9.01612313903425,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0.57423196411502,1.7230479846363,0.861884930743556,0,0,0,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:107365938..107365944,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:107365938..107365944,+ | |||
|id=chr8:107365938..107365944,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.67e-32!6;CL:0000677!1.67e-32!6;CL:0000212!1.67e-32!6;CL:0000584!1.67e-32!6;CL:0002563!6.44e-29!9;CL:0002251!6.44e-29!9;CL:0000075!8.03e-28!7;CL:0000066!3.54e-20!25;CL:0002076!4.12e-17!15;CL:0000473!2.46e-16!3;CL:0000627!2.46e-16!3;CL:0000682!2.46e-16!3;CL:0000223!1.14e-12!20;CL:0000063!8.73e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.53e-52,6;CL:0000677,2.53e-52,6;CL:0000584,2.53e-52,6;CL:0000075,6.09e-45,7;CL:0002563,4.33e-35,9;CL:0002251,4.33e-35,9;CL:0002076,2.92e-21,15;CL:0000066,2.79e-18,25;CL:0000223,4.71e-16,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.84e-34!15;UBERON:0003350!6.44e-29!9;UBERON:0004808!6.44e-29!9;UBERON:0001277!6.44e-29!9;UBERON:0001242!9.36e-26!13;UBERON:0000060!9.36e-26!13;UBERON:0001262!9.36e-26!13;UBERON:0004786!9.36e-26!13;UBERON:0000485!1.48e-23!11;UBERON:0004923!7.07e-21!24;UBERON:0000160!1.75e-13!43;UBERON:0001962!6.18e-11!2;UBERON:0001961!6.18e-11!2;UBERON:0001744!6.18e-11!2;UBERON:0005409!2.11e-09!59;UBERON:0002465!1.39e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.33e-35,9;UBERON:0004808,4.33e-35,9;UBERON:0001277,4.33e-35,9;UBERON:0000485,8.23e-29,11;UBERON:0001242,1.86e-24,13;UBERON:0001262,1.86e-24,13;UBERON:0004786,1.86e-24,13;UBERON:0000344,2.92e-21,15;UBERON:0000160,9.44e-15,31;UBERON:0004923,1.93e-13,24;UBERON:0005409,8.37e-10,47 | |||
|phase1_expression=0,3.14077866875425,2.27499619694768,9.37639055051173,9.01612313903425,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,0.57423196411502,1.7230479846363,0.861884930743556,0,0,0,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:107365938..107365944,+ | |||
}} |
Revision as of 14:33, 14 September 2013
Short description: | p@chr8:107365938..107365944, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:107365938..107365944, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.53e-52 | 6 |
gut absorptive cell | 2.53e-52 | 6 |
enterocyte | 2.53e-52 | 6 |
columnar/cuboidal epithelial cell | 6.09e-45 | 7 |
intestinal epithelial cell | 4.33e-35 | 9 |
epithelial cell of alimentary canal | 4.33e-35 | 9 |
endo-epithelial cell | 2.92e-21 | 15 |
epithelial cell | 2.79e-18 | 25 |
endodermal cell | 4.71e-16 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.33e-35 | 9 |
gastrointestinal system epithelium | 4.33e-35 | 9 |
intestinal epithelium | 4.33e-35 | 9 |
simple columnar epithelium | 8.23e-29 | 11 |
intestinal mucosa | 1.86e-24 | 13 |
wall of intestine | 1.86e-24 | 13 |
gastrointestinal system mucosa | 1.86e-24 | 13 |
mucosa | 2.92e-21 | 15 |
intestine | 9.44e-15 | 31 |
organ component layer | 1.93e-13 | 24 |
gastrointestinal system | 8.37e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.