FFCP PHASE1:Mm9::chrX:119510960..119511034,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54561|HGNC=|MCL_coexpression_id=1|UniProt=Q794H2|association_with_transcript=0bp_to_ENSMUST00000079490,NM_138742,uc009uel.1_5end|description=CAGE_peak_1_at_Nap1l3_5end|id=chrX:119510960..119511034,-|ontology_enrichment_celltype=CL:0000540!4.07e-15!33;CL:0000047!4.07e-15!33;CL:0000031!4.07e-15!33;CL:0000404!4.07e-15!33;CL:0000393!1.58e-13!39;CL:0000211!1.58e-13!39;CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000221!1.27e-11!44;CL:0000133!1.27e-11!44;CL:0002319!1.79e-11!43;CL:0000055!7.01e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.84e-16,33;CL:0000047,6.84e-16,33;CL:0000031,6.84e-16,33;CL:0000404,6.84e-16,33;CL:0000393,1.91e-14,39;CL:0000211,1.91e-14,39;CL:0000117,4.42e-13,23;CL:0000337,4.42e-13,23;CL:0000221,3.30e-12,44;CL:0000133,3.30e-12,44;CL:0002319,4.75e-12,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.04e-30!73;UBERON:0005743!4.04e-30!73;UBERON:0000073!1.86e-28!75;UBERON:0001016!1.86e-28!75;UBERON:0002346!8.72e-26!71;UBERON:0003075!8.72e-26!71;UBERON:0007284!8.72e-26!71;UBERON:0004121!1.64e-25!102;UBERON:0000924!1.64e-25!102;UBERON:0006601!1.64e-25!102;UBERON:0000033!1.72e-23!63;UBERON:0001049!5.72e-23!52;UBERON:0005068!5.72e-23!52;UBERON:0006241!5.72e-23!52;UBERON:0007135!5.72e-23!52;UBERON:0000955!1.01e-21!50;UBERON:0006238!1.01e-21!50;UBERON:0002616!3.73e-21!49;UBERON:0003056!1.09e-20!49;UBERON:0003080!2.68e-18!40;UBERON:0002020!7.34e-18!34;UBERON:0002780!1.14e-17!39;UBERON:0001890!1.14e-17!39;UBERON:0006240!1.14e-17!39;UBERON:0002791!1.23e-14!29;UBERON:0003528!1.23e-14!29;UBERON:0001893!1.23e-14!29;UBERON:0007811!2.66e-10!86;UBERON:0000956!3.12e-10!21;UBERON:0001869!3.12e-10!21;UBERON:0000203!3.12e-10!21;UBERON:0000153!2.67e-09!94;UBERON:0004111!3.19e-09!122;UBERON:0002619!3.41e-09!17;UBERON:0000025!4.11e-09!114;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000468!3.88e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-31,73;UBERON:0001016,1.25e-29,75;UBERON:0002346,7.73e-28,64;UBERON:0003075,7.73e-28,64;UBERON:0007284,7.73e-28,64;UBERON:0000073,9.10e-26,54;UBERON:0004121,3.88e-25,95;UBERON:0000924,3.88e-25,95;UBERON:0006601,3.88e-25,95;UBERON:0001049,4.52e-24,52;UBERON:0005068,4.52e-24,52;UBERON:0006241,4.52e-24,52;UBERON:0007135,4.52e-24,52;UBERON:0010371,1.56e-22,73;UBERON:0003056,2.12e-21,49;UBERON:0010314,2.50e-21,92;UBERON:0000955,1.85e-20,47;UBERON:0006238,1.85e-20,47;UBERON:0002616,7.12e-20,46;UBERON:0003080,7.32e-19,40;UBERON:0002020,8.58e-19,34;UBERON:0002780,3.37e-18,39;UBERON:0001890,3.37e-18,39;UBERON:0006240,3.37e-18,39;UBERON:0003528,2.21e-15,29;UBERON:0002791,2.21e-15,29;UBERON:0001893,2.21e-15,29;UBERON:0000956,9.99e-11,21;UBERON:0001869,9.99e-11,21;UBERON:0000203,9.99e-11,21;UBERON:0002619,1.25e-09,17;UBERON:0002021,4.88e-08,10;UBERON:0000411,4.88e-08,10;UBERON:0001950,4.88e-08,10;UBERON:0000025,5.31e-08,114;UBERON:0004111,7.28e-08,122|phase1_expression=4.80446541314382,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,8.84450217571126,0,0,0,0.22940928106717,0,0,0.430942465371778,0,0,0.221730510655305,0,0.61506478758457,0,0,0.831173226792462,0.204169356262369,0,0,0,0,0,0,3.77690453926732,2.83855407414641,1.83546752161682,0,1.30815093828268,1.97717564461025,3.4997381833371,1.25987779462826,1.43752564364972,0,0,0,0,1.14613375975503,2.06268836910977,21.2432283902578,28.5655128806898,18.3811107016792,1.0165335962074,0,0,0,0,2.39680088414724,1.53687322128622,3.52544681848824,4.05017814995072,3.78584930432488,42.5619966761667,37.7685205027259,4.5321595709533,3.1629005436018,6.43453150627015,77.0811166995721,51.2026225721603,54.3767127727102,16.353899678544,15.2784364816024,17.1901412283731,43.8317308432168,48.9603470727562,52.2570007396691,60.9881171930492,52.6775218956681,37.839087502536,0.227178579999552,0.68014404096107,0.579728977403356,0,2.719885334831,2.15881276655127,1.94932925234301,3.13618820968135,1.96622188184453,0.681721290312231,0.259786004602869,0.35333957451034,3.09855523508697,6.41632387071589,5.09610479413291,7.11066703153331,0.865964164044856,0.506719730950197,0,1.48439043634778,0.517875767294343,4.15637989381509,1.38788261412909,2.43572382649713,0.691846491768175,2.11011696773672,1.99900802130698,1.88499886994513,0.741584903203122,1.15679485535929,0,1.13236794963186,1.10420759230197,1.45462575940567,5.59175283654366,24.0080253549469,16.7557365450764,0.255457055208591,0.359445373517761,0,0.127070227073065,41.0426351969214,29.7375391832107,18.7224984648168,32.678972196148,30.6858548796397,40.7264567336738,32.772735139687,2.34230536855727,0.995255764880744,4.0435641349388,3.15662783829711,1.95180664444056,2.75882525320168,4.14142898552303,4.21973489940002,5.03470093719826,5.63700369253339,4.59138450342671,8.53721123438752,1.29340795759705,1.32374256117473,1.58356011747554,1.31517439456545,0.556094498451196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| ||
|EntrezGene=54561 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q794H2 | |||
|association_with_transcript=0bp_to_ENSMUST00000079490,NM_138742,uc009uel.1_5end | |||
|description=CAGE_peak_1_at_Nap1l3_5end | |||
|id=chrX:119510960..119511034,- | |||
|ontology_enrichment_celltype=CL:0000540!4.07e-15!33;CL:0000047!4.07e-15!33;CL:0000031!4.07e-15!33;CL:0000404!4.07e-15!33;CL:0000393!1.58e-13!39;CL:0000211!1.58e-13!39;CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000221!1.27e-11!44;CL:0000133!1.27e-11!44;CL:0002319!1.79e-11!43;CL:0000055!7.01e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.84e-16,33;CL:0000047,6.84e-16,33;CL:0000031,6.84e-16,33;CL:0000404,6.84e-16,33;CL:0000393,1.91e-14,39;CL:0000211,1.91e-14,39;CL:0000117,4.42e-13,23;CL:0000337,4.42e-13,23;CL:0000221,3.30e-12,44;CL:0000133,3.30e-12,44;CL:0002319,4.75e-12,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.04e-30!73;UBERON:0005743!4.04e-30!73;UBERON:0000073!1.86e-28!75;UBERON:0001016!1.86e-28!75;UBERON:0002346!8.72e-26!71;UBERON:0003075!8.72e-26!71;UBERON:0007284!8.72e-26!71;UBERON:0004121!1.64e-25!102;UBERON:0000924!1.64e-25!102;UBERON:0006601!1.64e-25!102;UBERON:0000033!1.72e-23!63;UBERON:0001049!5.72e-23!52;UBERON:0005068!5.72e-23!52;UBERON:0006241!5.72e-23!52;UBERON:0007135!5.72e-23!52;UBERON:0000955!1.01e-21!50;UBERON:0006238!1.01e-21!50;UBERON:0002616!3.73e-21!49;UBERON:0003056!1.09e-20!49;UBERON:0003080!2.68e-18!40;UBERON:0002020!7.34e-18!34;UBERON:0002780!1.14e-17!39;UBERON:0001890!1.14e-17!39;UBERON:0006240!1.14e-17!39;UBERON:0002791!1.23e-14!29;UBERON:0003528!1.23e-14!29;UBERON:0001893!1.23e-14!29;UBERON:0007811!2.66e-10!86;UBERON:0000956!3.12e-10!21;UBERON:0001869!3.12e-10!21;UBERON:0000203!3.12e-10!21;UBERON:0000153!2.67e-09!94;UBERON:0004111!3.19e-09!122;UBERON:0002619!3.41e-09!17;UBERON:0000025!4.11e-09!114;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000468!3.88e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-31,73;UBERON:0001016,1.25e-29,75;UBERON:0002346,7.73e-28,64;UBERON:0003075,7.73e-28,64;UBERON:0007284,7.73e-28,64;UBERON:0000073,9.10e-26,54;UBERON:0004121,3.88e-25,95;UBERON:0000924,3.88e-25,95;UBERON:0006601,3.88e-25,95;UBERON:0001049,4.52e-24,52;UBERON:0005068,4.52e-24,52;UBERON:0006241,4.52e-24,52;UBERON:0007135,4.52e-24,52;UBERON:0010371,1.56e-22,73;UBERON:0003056,2.12e-21,49;UBERON:0010314,2.50e-21,92;UBERON:0000955,1.85e-20,47;UBERON:0006238,1.85e-20,47;UBERON:0002616,7.12e-20,46;UBERON:0003080,7.32e-19,40;UBERON:0002020,8.58e-19,34;UBERON:0002780,3.37e-18,39;UBERON:0001890,3.37e-18,39;UBERON:0006240,3.37e-18,39;UBERON:0003528,2.21e-15,29;UBERON:0002791,2.21e-15,29;UBERON:0001893,2.21e-15,29;UBERON:0000956,9.99e-11,21;UBERON:0001869,9.99e-11,21;UBERON:0000203,9.99e-11,21;UBERON:0002619,1.25e-09,17;UBERON:0002021,4.88e-08,10;UBERON:0000411,4.88e-08,10;UBERON:0001950,4.88e-08,10;UBERON:0000025,5.31e-08,114;UBERON:0004111,7.28e-08,122 | |||
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| |||
|short_description=p1@Nap1l3 | |||
}} |
Revision as of 19:15, 14 September 2013
Short description: | p1@Nap1l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nap1l3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000079490, NM_138742, uc009uel.1_5end |
EntrezGene: | Nap1l3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.84e-16 | 33 |
neuronal stem cell | 6.84e-16 | 33 |
neuroblast | 6.84e-16 | 33 |
electrically signaling cell | 6.84e-16 | 33 |
electrically responsive cell | 1.91e-14 | 39 |
electrically active cell | 1.91e-14 | 39 |
CNS neuron (sensu Vertebrata) | 4.42e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.42e-13 | 23 |
ectodermal cell | 3.30e-12 | 44 |
neurectodermal cell | 3.30e-12 | 44 |
neural cell | 4.75e-12 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.