FFCP PHASE1:Mm9::chr11:68886926..68886931,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=241|UniProt=|association_with_transcript=0bp_to_ENSMUST00000082965_5end|description=CAGE_peak_1_at_ENSMUST00000082965_5end|id=chr11:68886926..68886931,+|ontology_enrichment_celltype=CL:0000144!1.36e-39!121;CL:0000012!1.36e-39!121;CL:0002371!3.59e-37!118;CL:0000548!3.16e-35!115;CL:0000004!3.16e-35!115;CL:0000255!3.16e-35!115;CL:0000034!3.22e-35!97;CL:0000723!1.73e-33!91;CL:0000048!1.73e-33!91;CL:0000063!7.91e-23!66;CL:0000219!1.31e-21!54;CL:0002320!1.80e-20!46;CL:0000134!1.80e-20!46;CL:0000988!5.06e-17!32;CL:0002032!5.06e-17!32;CL:0000037!5.06e-17!32;CL:0000566!5.06e-17!32;CL:0000837!5.06e-17!32;CL:0002321!3.50e-15!70;CL:0000220!3.50e-15!70;CL:0002031!3.54e-13!25;CL:0000049!9.36e-11!19;CL:0000055!9.82e-11!50;CL:0000763!8.33e-09!16;CL:0000221!1.24e-08!44;CL:0000133!1.24e-08!44;CL:0002319!1.35e-08!43;CL:0000393!1.38e-08!39;CL:0000211!1.38e-08!39;CL:0000738!3.57e-08!17;CL:0002087!3.57e-08!17;CL:0000838!1.80e-07!12;CL:0000542!2.19e-07!13;CL:0000051!2.19e-07!13;CL:0000839!4.88e-07!13;CL:0000084!5.19e-07!11;CL:0000827!5.19e-07!11;CL:0000540!7.23e-07!33;CL:0000047!7.23e-07!33;CL:0000031!7.23e-07!33;CL:0000404!7.23e-07!33|ontology_enrichment_celltype_v019_2=CL:0000034,3.22e-35,97;CL:0000723,1.73e-33,91;CL:0000048,1.73e-33,91;CL:0000219,1.31e-21,54;CL:0002320,1.80e-20,46;CL:0000134,1.80e-20,46;CL:0000988,5.06e-17,32;CL:0002032,5.06e-17,32;CL:0000037,5.06e-17,32;CL:0000837,5.06e-17,32;CL:0002321,3.50e-15,70;CL:0002031,3.54e-13,25;CL:0000049,9.36e-11,19;CL:0000763,8.33e-09,16;CL:0000221,1.24e-08,44;CL:0000133,1.24e-08,44;CL:0002319,1.35e-08,43;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39;CL:0000738,3.57e-08,17;CL:0002087,3.57e-08,17;CL:0000838,1.80e-07,12;CL:0000542,2.19e-07,13;CL:0000051,2.19e-07,13;CL:0000839,4.88e-07,13;CL:0000084,5.19e-07,11;CL:0000827,5.19e-07,11;CL:0000540,7.23e-07,33;CL:0000047,7.23e-07,33;CL:0000031,7.23e-07,33;CL:0000404,7.23e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.80e-20!46;UBERON:0002390!1.83e-08!45;UBERON:0003061!1.83e-08!45;UBERON:0002204!1.10e-07!32;UBERON:0000490!1.39e-07!66;UBERON:0002193!1.90e-07!48;UBERON:0002371!1.93e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.80e-20,46;UBERON:0002390,1.83e-08,45;UBERON:0003061,1.83e-08,45;UBERON:0002204,1.09e-07,32;UBERON:0000490,1.39e-07,66;UBERON:0002193,1.90e-07,48;UBERON:0002405,1.90e-07,48;UBERON:0002371,1.93e-07,16|phase1_expression=10.2495262147068,11.5161884520989,20.4749657725291,10.2837831844322,29.0519523368881,16.2842893754533,20.7915250130018,161.145907655087,18.4433226018683,19.8954847373694,44.0030178339548,51.8519033469687,167.947916062513,98.4353731237911,131.578355917187,155.096054820607,40.5745889314325,20.9782339963228,19.6073640056206,23.7658205006897,2.63634199468316,24.8227378002213,27.9483774378661,3.83981814704176,5.50582274561208,6.89078356938024,12.4920978886132,12.7128027284675,1.33016393619462,1.26015064879965,13.082100128663,441.346318054444,357.96770637422,63.3926724061755,58.6368788095087,76.4679368649065,56.963250397201,22.1821764290561,35.9414258480948,25.6526634547161,27.0586484494267,15.7100461540443,15.5363312969969,9.81995180209503,12.3679856087808,11.9305388905093,17.9950009200049,17.8780628231966,7.0299578475031,8.55491555926847,6.99932108126813,10.062679505548,26.6774343631801,26.8383992544197,27.8957853288245,23.9251275513431,42.406949110936,97.977697532714,16.7922662513466,16.9277113367051,26.6209189472595,23.7191172448392,12.450127145556,12.1486461832989,13.8441290759376,17.0515227587064,11.6844043102178,19.2109152660777,16.6940275816649,26.0561460980163,23.7667206327062,17.424710048632,9.27647871996777,20.7009450673272,23.3862949284497,39.5264078242309,7.70811166995721,6.2566795661742,6.60508093001847,13.9799464994005,14.1805847583735,13.5437476344758,10.0505879640497,7.31591393041184,6.41752640662602,8.83885756421003,10.5355043791336,16.9623495701024,46.3444303199086,89.6278702866476,118.554575878986,19.7897491705719,23.7989966797713,37.2395202230094,24.0417274455638,12.0967259516281,1.54488862144927,7.49893419343454,12.9893002301434,7.42013106471715,9.71819596459095,2.56652954828636,2.54805239706646,14.2213340630666,11.4740251735943,10.6411143499541,14.6602089054287,8.22123933977232,5.95557132388495,4.00793775475027,15.4401940821861,13.7009465240464,6.45723392316964,3.46662073271032,6.82014501387088,2.26199864393416,3.95511948374998,5.35017620603673,10.6153266233985,3.23533699894818,5.07935492458905,5.81850303762267,3.72783522436244,6.14839673724249,8.16842156572475,3.0654846625031,83.2715115316146,170.372375602128,103.053954156255,3.74476598512057,4.11750542536764,5.02617408451458,3.12883776346098,2.55715457330331,2.90903262383384,3.0825839982874,9.3692214742291,4.97627882440372,5.55990068554084,1.68353484709179,11.1903580947925,11.7250073261071,11.7040384373477,5.87748789559289,6.66757691683013,5.50888997224854,9.55757590509234,1.03481348295606,22.8502072508813,14.750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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=241 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000082965_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000082965_5end | |||
|id=chr11:68886926..68886931,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.36e-39!121;CL:0000012!1.36e-39!121;CL:0002371!3.59e-37!118;CL:0000548!3.16e-35!115;CL:0000004!3.16e-35!115;CL:0000255!3.16e-35!115;CL:0000034!3.22e-35!97;CL:0000723!1.73e-33!91;CL:0000048!1.73e-33!91;CL:0000063!7.91e-23!66;CL:0000219!1.31e-21!54;CL:0002320!1.80e-20!46;CL:0000134!1.80e-20!46;CL:0000988!5.06e-17!32;CL:0002032!5.06e-17!32;CL:0000037!5.06e-17!32;CL:0000566!5.06e-17!32;CL:0000837!5.06e-17!32;CL:0002321!3.50e-15!70;CL:0000220!3.50e-15!70;CL:0002031!3.54e-13!25;CL:0000049!9.36e-11!19;CL:0000055!9.82e-11!50;CL:0000763!8.33e-09!16;CL:0000221!1.24e-08!44;CL:0000133!1.24e-08!44;CL:0002319!1.35e-08!43;CL:0000393!1.38e-08!39;CL:0000211!1.38e-08!39;CL:0000738!3.57e-08!17;CL:0002087!3.57e-08!17;CL:0000838!1.80e-07!12;CL:0000542!2.19e-07!13;CL:0000051!2.19e-07!13;CL:0000839!4.88e-07!13;CL:0000084!5.19e-07!11;CL:0000827!5.19e-07!11;CL:0000540!7.23e-07!33;CL:0000047!7.23e-07!33;CL:0000031!7.23e-07!33;CL:0000404!7.23e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.22e-35,97;CL:0000723,1.73e-33,91;CL:0000048,1.73e-33,91;CL:0000219,1.31e-21,54;CL:0002320,1.80e-20,46;CL:0000134,1.80e-20,46;CL:0000988,5.06e-17,32;CL:0002032,5.06e-17,32;CL:0000037,5.06e-17,32;CL:0000837,5.06e-17,32;CL:0002321,3.50e-15,70;CL:0002031,3.54e-13,25;CL:0000049,9.36e-11,19;CL:0000763,8.33e-09,16;CL:0000221,1.24e-08,44;CL:0000133,1.24e-08,44;CL:0002319,1.35e-08,43;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39;CL:0000738,3.57e-08,17;CL:0002087,3.57e-08,17;CL:0000838,1.80e-07,12;CL:0000542,2.19e-07,13;CL:0000051,2.19e-07,13;CL:0000839,4.88e-07,13;CL:0000084,5.19e-07,11;CL:0000827,5.19e-07,11;CL:0000540,7.23e-07,33;CL:0000047,7.23e-07,33;CL:0000031,7.23e-07,33;CL:0000404,7.23e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.80e-20!46;UBERON:0002390!1.83e-08!45;UBERON:0003061!1.83e-08!45;UBERON:0002204!1.10e-07!32;UBERON:0000490!1.39e-07!66;UBERON:0002193!1.90e-07!48;UBERON:0002371!1.93e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.80e-20,46;UBERON:0002390,1.83e-08,45;UBERON:0003061,1.83e-08,45;UBERON:0002204,1.09e-07,32;UBERON:0000490,1.39e-07,66;UBERON:0002193,1.90e-07,48;UBERON:0002405,1.90e-07,48;UBERON:0002371,1.93e-07,16 | |||
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| |||
|short_description=p1@ENSMUST00000082965 | |||
}} |
Revision as of 20:32, 12 September 2013
Short description: | p1@ENSMUST00000082965 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082965_5end |
Coexpression cluster: | MCL_coexpression_mm9:241 |
Association with transcript: | 0bp_to_ENSMUST00000082965_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.22e-35 | 97 |
somatic stem cell | 1.73e-33 | 91 |
multi fate stem cell | 1.73e-33 | 91 |
motile cell | 1.31e-21 | 54 |
connective tissue cell | 1.80e-20 | 46 |
mesenchymal cell | 1.80e-20 | 46 |
hematopoietic cell | 5.06e-17 | 32 |
hematopoietic oligopotent progenitor cell | 5.06e-17 | 32 |
hematopoietic stem cell | 5.06e-17 | 32 |
hematopoietic multipotent progenitor cell | 5.06e-17 | 32 |
embryonic cell | 3.50e-15 | 70 |
hematopoietic lineage restricted progenitor cell | 3.54e-13 | 25 |
common myeloid progenitor | 9.36e-11 | 19 |
myeloid cell | 8.33e-09 | 16 |
ectodermal cell | 1.24e-08 | 44 |
neurectodermal cell | 1.24e-08 | 44 |
neural cell | 1.35e-08 | 43 |
electrically responsive cell | 1.38e-08 | 39 |
electrically active cell | 1.38e-08 | 39 |
leukocyte | 3.57e-08 | 17 |
nongranular leukocyte | 3.57e-08 | 17 |
lymphoid lineage restricted progenitor cell | 1.80e-07 | 12 |
lymphocyte | 2.19e-07 | 13 |
common lymphoid progenitor | 2.19e-07 | 13 |
myeloid lineage restricted progenitor cell | 4.88e-07 | 13 |
T cell | 5.19e-07 | 11 |
pro-T cell | 5.19e-07 | 11 |
neuron | 7.23e-07 | 33 |
neuronal stem cell | 7.23e-07 | 33 |
neuroblast | 7.23e-07 | 33 |
electrically signaling cell | 7.23e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.80e-20 | 46 |
hematopoietic system | 1.83e-08 | 45 |
blood island | 1.83e-08 | 45 |
musculoskeletal system | 1.09e-07 | 32 |
unilaminar epithelium | 1.39e-07 | 66 |
hemolymphoid system | 1.90e-07 | 48 |
immune system | 1.90e-07 | 48 |
bone marrow | 1.93e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.