FFCP PHASE1:Mm9::chr15:81575569..81575599,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20286|HGNC=|MCL_coexpression_id=13|UniProt=F8VPP8,Q3UGE6|association_with_transcript=291bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end|description=CAGE_peak_2_at_Zc3h7b_5end|id=chr15:81575569..81575599,+|ontology_enrichment_celltype=CL:0000221!9.53e-20!44;CL:0000133!9.53e-20!44;CL:0002319!1.64e-19!43;CL:0000540!8.03e-19!33;CL:0000047!8.03e-19!33;CL:0000031!8.03e-19!33;CL:0000404!8.03e-19!33;CL:0000393!2.78e-18!39;CL:0000211!2.78e-18!39;CL:0000055!3.56e-18!50;CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0002321!1.17e-09!70;CL:0000220!1.17e-09!70|ontology_enrichment_celltype_v019_2=CL:0000221,9.53e-20,44;CL:0000133,9.53e-20,44;CL:0002319,1.64e-19,43;CL:0000540,8.02e-19,33;CL:0000047,8.02e-19,33;CL:0000031,8.02e-19,33;CL:0000404,8.02e-19,33;CL:0000393,2.78e-18,39;CL:0000211,2.78e-18,39;CL:0000117,1.06e-13,23;CL:0000337,1.06e-13,23;CL:0002321,1.17e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.72e-33!73;UBERON:0005743!6.72e-33!73;UBERON:0000073!9.20e-32!75;UBERON:0001016!9.20e-32!75;UBERON:0004121!1.07e-26!102;UBERON:0000924!1.07e-26!102;UBERON:0006601!1.07e-26!102;UBERON:0002346!1.61e-23!71;UBERON:0003075!1.61e-23!71;UBERON:0007284!1.61e-23!71;UBERON:0001049!1.74e-21!52;UBERON:0005068!1.74e-21!52;UBERON:0006241!1.74e-21!52;UBERON:0007135!1.74e-21!52;UBERON:0000033!2.37e-20!63;UBERON:0002616!2.51e-19!49;UBERON:0000955!2.76e-19!50;UBERON:0006238!2.76e-19!50;UBERON:0003056!1.67e-16!49;UBERON:0002020!1.77e-16!34;UBERON:0004111!1.01e-15!122;UBERON:0003080!1.83e-15!40;UBERON:0000025!1.99e-15!114;UBERON:0002780!5.58e-15!39;UBERON:0001890!5.58e-15!39;UBERON:0006240!5.58e-15!39;UBERON:0002791!3.57e-13!29;UBERON:0003528!3.57e-13!29;UBERON:0001893!3.57e-13!29;UBERON:0000956!1.87e-09!21;UBERON:0001869!1.87e-09!21;UBERON:0000203!1.87e-09!21;UBERON:0007811!8.71e-09!86;UBERON:0000153!6.53e-08!94;UBERON:0002619!1.25e-07!17;UBERON:0003076!9.04e-07!12;UBERON:0003057!9.04e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.72e-33,73;UBERON:0001016,9.20e-32,75;UBERON:0004121,5.19e-27,95;UBERON:0000924,5.19e-27,95;UBERON:0006601,5.19e-27,95;UBERON:0010314,4.83e-25,92;UBERON:0002346,2.12e-24,64;UBERON:0003075,2.12e-24,64;UBERON:0007284,2.12e-24,64;UBERON:0000073,8.36e-23,54;UBERON:0001049,1.74e-21,52;UBERON:0005068,1.74e-21,52;UBERON:0006241,1.74e-21,52;UBERON:0007135,1.74e-21,52;UBERON:0010371,2.09e-20,73;UBERON:0002616,1.65e-17,46;UBERON:0000955,1.80e-17,47;UBERON:0006238,1.80e-17,47;UBERON:0003056,1.67e-16,49;UBERON:0002020,1.77e-16,34;UBERON:0004111,1.01e-15,122;UBERON:0003080,1.83e-15,40;UBERON:0000025,1.99e-15,114;UBERON:0002780,5.57e-15,39;UBERON:0001890,5.57e-15,39;UBERON:0006240,5.57e-15,39;UBERON:0003528,3.56e-13,29;UBERON:0002791,3.56e-13,29;UBERON:0001893,3.56e-13,29;UBERON:0000956,1.87e-09,21;UBERON:0001869,1.87e-09,21;UBERON:0000203,1.87e-09,21;UBERON:0002619,1.25e-07,17;UBERON:0003076,9.04e-07,12;UBERON:0003057,9.04e-07,12|phase1_expression=17.9366708757369,2.09385244583617,0.454999239389536,0.60492842261366,0.500895729946347,5.20425742926858,5.13947809310157,2.32421982194837,3.23814060948833,7.0219357896598,2.56826952338257,2.71225340584144,2.05440875917447,2.36035086531293,3.33109761815663,3.84703008040669,2.09868563438444,4.73193248037357,6.99283611389268,2.54633791078818,14.5424026158329,15.0922245825346,10.9703911438353,3.67982572424835,2.52350209173887,1.14846392823004,3.01533397311352,2.15471232685889,2.66032787238923,3.52842181663903,3.76941868114018,9.52546010189447,5.53558308826113,15.8481681015439,7.51014211353314,8.81043620400009,8.98345167554424,0.837063261473815,0,0,2.35292595212406,1.36609096991689,0.485510353031154,14.1004436132647,12.0638548151222,10.4621648732158,30.5132624295735,13.5175596955877,19.7717564461025,9.52706505463989,8.81914456239784,15.8127820801469,7.71799987865587,1.45072428402269,7.73015738027667,9.77585856936598,9.74213695791773,13.9231464914909,32.7752666592548,26.4495489636016,30.4239073682966,13.5537812827653,10.6715375533337,13.0485459005803,15.8218618010716,8.5257613793532,20.3728075152515,28.432154593795,20.5305432370786,23.7610451463776,20.6118462124354,33.1355141908412,30.4798586513227,20.0884910712525,17.0604938412461,11.0306254393203,19.82085857989,28.3465890549117,26.7275367865864,29.5425284515634,23.8782749802289,28.129322010065,20.3803589271008,18.5711661310454,22.0029476798607,30.0521157183141,25.1997875014412,24.9775257405903,8.02697649331751,7.55715601067855,20.0006497204158,2.58127163094416,11.5595126730318,11.3337670243942,8.4470934268197,8.51251085484938,6.17955448579708,8.35108580632483,5.97507810586598,5.65343319216544,14.7885590765515,8.98285341900225,0,0,3.68034769719064,4.81383744402687,7.07734223020697,6.96521666286266,4.91981978929626,16.7739617143252,6.41895709034703,9.43842982767638,9.4552353874984,7.988299949289,14.1106448562846,11.6869929936598,4.44950941921873,17.0627241165496,5.30766331169925,9.70601099684455,6.18356251689102,4.363877278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| ||
|EntrezGene=20286 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=F8VPP8,Q3UGE6 | |||
|association_with_transcript=291bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end | |||
|description=CAGE_peak_2_at_Zc3h7b_5end | |||
|id=chr15:81575569..81575599,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.53e-20!44;CL:0000133!9.53e-20!44;CL:0002319!1.64e-19!43;CL:0000540!8.03e-19!33;CL:0000047!8.03e-19!33;CL:0000031!8.03e-19!33;CL:0000404!8.03e-19!33;CL:0000393!2.78e-18!39;CL:0000211!2.78e-18!39;CL:0000055!3.56e-18!50;CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0002321!1.17e-09!70;CL:0000220!1.17e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.53e-20,44;CL:0000133,9.53e-20,44;CL:0002319,1.64e-19,43;CL:0000540,8.02e-19,33;CL:0000047,8.02e-19,33;CL:0000031,8.02e-19,33;CL:0000404,8.02e-19,33;CL:0000393,2.78e-18,39;CL:0000211,2.78e-18,39;CL:0000117,1.06e-13,23;CL:0000337,1.06e-13,23;CL:0002321,1.17e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.72e-33!73;UBERON:0005743!6.72e-33!73;UBERON:0000073!9.20e-32!75;UBERON:0001016!9.20e-32!75;UBERON:0004121!1.07e-26!102;UBERON:0000924!1.07e-26!102;UBERON:0006601!1.07e-26!102;UBERON:0002346!1.61e-23!71;UBERON:0003075!1.61e-23!71;UBERON:0007284!1.61e-23!71;UBERON:0001049!1.74e-21!52;UBERON:0005068!1.74e-21!52;UBERON:0006241!1.74e-21!52;UBERON:0007135!1.74e-21!52;UBERON:0000033!2.37e-20!63;UBERON:0002616!2.51e-19!49;UBERON:0000955!2.76e-19!50;UBERON:0006238!2.76e-19!50;UBERON:0003056!1.67e-16!49;UBERON:0002020!1.77e-16!34;UBERON:0004111!1.01e-15!122;UBERON:0003080!1.83e-15!40;UBERON:0000025!1.99e-15!114;UBERON:0002780!5.58e-15!39;UBERON:0001890!5.58e-15!39;UBERON:0006240!5.58e-15!39;UBERON:0002791!3.57e-13!29;UBERON:0003528!3.57e-13!29;UBERON:0001893!3.57e-13!29;UBERON:0000956!1.87e-09!21;UBERON:0001869!1.87e-09!21;UBERON:0000203!1.87e-09!21;UBERON:0007811!8.71e-09!86;UBERON:0000153!6.53e-08!94;UBERON:0002619!1.25e-07!17;UBERON:0003076!9.04e-07!12;UBERON:0003057!9.04e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.72e-33,73;UBERON:0001016,9.20e-32,75;UBERON:0004121,5.19e-27,95;UBERON:0000924,5.19e-27,95;UBERON:0006601,5.19e-27,95;UBERON:0010314,4.83e-25,92;UBERON:0002346,2.12e-24,64;UBERON:0003075,2.12e-24,64;UBERON:0007284,2.12e-24,64;UBERON:0000073,8.36e-23,54;UBERON:0001049,1.74e-21,52;UBERON:0005068,1.74e-21,52;UBERON:0006241,1.74e-21,52;UBERON:0007135,1.74e-21,52;UBERON:0010371,2.09e-20,73;UBERON:0002616,1.65e-17,46;UBERON:0000955,1.80e-17,47;UBERON:0006238,1.80e-17,47;UBERON:0003056,1.67e-16,49;UBERON:0002020,1.77e-16,34;UBERON:0004111,1.01e-15,122;UBERON:0003080,1.83e-15,40;UBERON:0000025,1.99e-15,114;UBERON:0002780,5.57e-15,39;UBERON:0001890,5.57e-15,39;UBERON:0006240,5.57e-15,39;UBERON:0003528,3.56e-13,29;UBERON:0002791,3.56e-13,29;UBERON:0001893,3.56e-13,29;UBERON:0000956,1.87e-09,21;UBERON:0001869,1.87e-09,21;UBERON:0000203,1.87e-09,21;UBERON:0002619,1.25e-07,17;UBERON:0003076,9.04e-07,12;UBERON:0003057,9.04e-07,12 | |||
|phase1_expression=17.9366708757369,2.09385244583617,0.454999239389536,0.60492842261366,0.500895729946347,5.20425742926858,5.13947809310157,2.32421982194837,3.23814060948833,7.0219357896598,2.56826952338257,2.71225340584144,2.05440875917447,2.36035086531293,3.33109761815663,3.84703008040669,2.09868563438444,4.73193248037357,6.99283611389268,2.54633791078818,14.5424026158329,15.0922245825346,10.9703911438353,3.67982572424835,2.52350209173887,1.14846392823004,3.01533397311352,2.15471232685889,2.66032787238923,3.52842181663903,3.76941868114018,9.52546010189447,5.53558308826113,15.8481681015439,7.51014211353314,8.81043620400009,8.98345167554424,0.837063261473815,0,0,2.35292595212406,1.36609096991689,0.485510353031154,14.1004436132647,12.0638548151222,10.4621648732158,30.5132624295735,13.5175596955877,19.7717564461025,9.52706505463989,8.81914456239784,15.8127820801469,7.71799987865587,1.45072428402269,7.73015738027667,9.77585856936598,9.74213695791773,13.9231464914909,32.7752666592548,26.4495489636016,30.4239073682966,13.5537812827653,10.6715375533337,13.0485459005803,15.8218618010716,8.5257613793532,20.3728075152515,28.432154593795,20.5305432370786,23.7610451463776,20.6118462124354,33.1355141908412,30.4798586513227,20.0884910712525,17.0604938412461,11.0306254393203,19.82085857989,28.3465890549117,26.7275367865864,29.5425284515634,23.8782749802289,28.129322010065,20.3803589271008,18.5711661310454,22.0029476798607,30.0521157183141,25.1997875014412,24.9775257405903,8.02697649331751,7.55715601067855,20.0006497204158,2.58127163094416,11.5595126730318,11.3337670243942,8.4470934268197,8.51251085484938,6.17955448579708,8.35108580632483,5.97507810586598,5.65343319216544,14.7885590765515,8.98285341900225,0,0,3.68034769719064,4.81383744402687,7.07734223020697,6.96521666286266,4.91981978929626,16.7739617143252,6.41895709034703,9.43842982767638,9.4552353874984,7.988299949289,14.1106448562846,11.6869929936598,4.44950941921873,17.0627241165496,5.30766331169925,9.70601099684455,6.18356251689102,4.363877278217,7.45567044872489,14.9318206475889,15.4990563041957,5.36459815938042,15.4561510612637,2.99951365496704,11.690460890722,20.0719456802462,13.7250180845588,15.5811396619952,16.339486098074,16.3657892691412,15.7918913865266,16.5486088329113,13.6464747559424,7.83763914843586,7.83440551144392,10.5220927943237,13.7927669540466,9.88579049063934,10.9837899181263,10.8507468841715,17.1451977861346,15.6298738747517,17.5222224926693,13.7112786491678,14.0119195406347,11.535470890237,12.4925298156404,8.32943783224784,7.78532297831674,4.52727816478817,6.99659263787008,10.7478504081986,1.40442637462647,3.86021860672073,5.96743348730745,9.73491130916859,10.3191466391682,10.0834754418168,9.70653415899362,11.215561209602,9.2560267732427,11.6266972375204,13.6819434713806,12.6106569756543,12.341988743511,9.19337798842933,18.564757386001,18.8597983778679,10.9775057645525,17.4468344388483,17.4540657308226,21.3012547625119,1.98251269790279,2.3800550999719,8.31824177087412,11.3795969211615,8.63411990858025,6.6555563125703,6.67134131534611,6.84812254005213,3.32170343081158,2.9645811850322,5.27803938480566,6.96347652144028,7.40863531052657,8.08937467788799,5.18731319699266,4.18196673834171,9.293727146701,12.6815848996799,16.9061603509621,11.2008230314923,11.8311017172252,17.3235475129087,16.6312092636797,12.989693022205,11.4609071324204,11.2291419168838,4.15033677922008,4.33797274861845,5.30709286805648,4.94696647246678,3.85434230638156,6.27060615356284,4.83789118384698,6.61701116136864,5.99900339067631,4.3929826110093,2.87536413054709,6.69853705803306,6.55279113540577,8.08252409430758,4.30553792452589,5.30687873499704,15.1497615936616,7.76914788258988,13.0371981153621,11.712410918488,9.85699042811709,11.8929442783689,11.1880511216426,17.5620283072019,14.6600684018758,15.5025282754142,21.5263937687608,12.6174752331118,13.9874835311375,12.8737662137545,12.0633027151418,7.61467957346193,2.45882136509518,8.55403913544671,17.1789131286937,15.1203075703942,7.86887737808042,8.07906967053994,20.8235424814729,21.0836921920185,22.1886099664783,22.4630670075399,21.6114713859922,15.0030561318081,22.6693992937941,21.9191893433484,22.9266911208984,11.2462460747632,13.4843080947855,9.43747699436453,16.125808976004,15.0122811905007,7.96470830039777,9.95400608235424,7.55808892411878,7.16699303072413,8.26845300066164,6.7635732547664,10.5955600198971,10.9060118843252,14.9728898921583,7.58488219045958,5.27093042874994,7.21948802737308,14.6389030474129,12.784337676223,11.7716402242307,9.85950361145325,13.1231772895282,18.5503570306153,13.3284706687718,19.1812917942198,5.63212099352905,3.60114520468494,9.70324951441832,2.96795255294664,11.7869031488011,6.57410881716899,4.77489376012546,5.25250879184196,8.16146342563582,21.5093350332191,5.80960994712699,17.1301100409475,9.25972636848558,6.40452753815949,5.46776910884101,5.26189798375002,23.457023339152,22.2522809194616,13.8199973804424,5.72802370809068,11.704431762502,9.14937602070819,9.39646465149671,8.36353184057875,6.5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| |||
|short_description=p2@Zc3h7b | |||
}} |
Revision as of 11:18, 13 September 2013
Short description: | p2@Zc3h7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zc3h7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 291bp_to_ENSMUST00000109554, NM_001081016, uc007wxd.1, uc007wxe.1_5end |
EntrezGene: | Zc3h7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.53e-20 | 44 |
neurectodermal cell | 9.53e-20 | 44 |
neural cell | 1.64e-19 | 43 |
neuron | 8.02e-19 | 33 |
neuronal stem cell | 8.02e-19 | 33 |
neuroblast | 8.02e-19 | 33 |
electrically signaling cell | 8.02e-19 | 33 |
electrically responsive cell | 2.78e-18 | 39 |
electrically active cell | 2.78e-18 | 39 |
CNS neuron (sensu Vertebrata) | 1.06e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-13 | 23 |
embryonic cell | 1.17e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.