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FFCP PHASE1:Mm9::chr1:107560446..107560497,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=227446|HGNC=|MCL_coexpression_id=3219|UniProt=E9QM90,G3X9J4,Q148V7,Q9D743|association_with_transcript=8bp_to_ENSMUST00000039173,ENSMUST00000086721,NM_029349,NM_173187,uc007cgi.2,uc007cgj.2,uc007cgk.2,uc007cgl.2,uc007cgm.2_5end|description=CAGE_peak_1_at_2310035C23Rik_5end|id=chr1:107560446..107560497,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!1.71e-11!99;UBERON:0002020!1.80e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0007811!6.18e-09!86;UBERON:0002616!1.00e-08!49;UBERON:0002791!1.58e-08!29;UBERON:0003528!1.58e-08!29;UBERON:0001893!1.58e-08!29;UBERON:0001017!2.73e-08!73;UBERON:0005743!2.73e-08!73;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000033!6.56e-08!63;UBERON:0000073!1.80e-07!75;UBERON:0001016!1.80e-07!75;UBERON:0003080!5.05e-07!40;UBERON:0000153!6.10e-07!94;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-10,54;UBERON:0002020,1.80e-10,34;UBERON:0001049,1.56e-09,52;UBERON:0005068,1.56e-09,52;UBERON:0006241,1.56e-09,52;UBERON:0007135,1.56e-09,52;UBERON:0010371,3.66e-09,73;UBERON:0011216,6.08e-09,194;UBERON:0003528,1.58e-08,29;UBERON:0002791,1.58e-08,29;UBERON:0001893,1.58e-08,29;UBERON:0001017,2.73e-08,73;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000955,7.11e-08,47;UBERON:0006238,7.11e-08,47;UBERON:0004121,8.74e-08,95;UBERON:0000924,8.74e-08,95;UBERON:0006601,8.74e-08,95;UBERON:0002346,1.26e-07,64;UBERON:0003075,1.26e-07,64;UBERON:0007284,1.26e-07,64;UBERON:0001016,1.80e-07,75;UBERON:0002616,1.90e-07,46;UBERON:0003080,5.05e-07,40;UBERON:0002780,9.89e-07,39;UBERON:0001890,9.89e-07,39;UBERON:0006240,9.89e-07,39|phase1_expression=47.5642075901238,80.6133191646924,79.6248668931688,110.7019013383,113.202434967874,57.0789524500425,56.5342590241172,64.0451684270218,37.8721662587984,43.0678728432468,34.243593645101,30.3931925772232,63.8578722643397,65.3904610094101,44.6367080832988,45.9618856974905,48.2697695908421,68.1398277173793,73.6304508462817,68.3267339394829,34.8677489619386,27.8014663362479,35.5231713228952,34.5583633233758,36.0172571275457,58.5716603397321,53.4144875237253,52.5749807753569,53.0165340283283,46.8776041353471,43.2374495777844,28.5763803056834,27.0628506537211,31.6963362030877,44.7720010614476,29.5897668738116,40.0171938274243,69.4762507023267,53.1308034276184,49.7347556775108,61.7643062432565,60.1080026763432,62.6308355410188,32.6072758556745,35.4819259268301,36.892897184498,30.5132624295735,13.7355848519681,14.2796018777407,19.8318497055769,18.6181940761732,11.5002051491977,54.8649121808798,63.8318684969983,62.5134466404983,27.2695002198104,30.3725446335082,33.5186859980338,46.5327859977075,61.3629535955558,46.2696924559511,18.9752937958714,12.450127145556,26.996991518442,32.6325899647102,24.8668040231135,19.7736072942147,20.7477884873639,42.9274994957098,38.7467043011952,39.7514176954112,54.8449890055303,55.438003778855,44.4641601150283,38.7215702913675,41.3648453974509,77.0811166995721,64.7374804091902,66.2044158334409,57.2386488749041,56.1734131718795,59.9050376140274,56.394965798279,63.0294123235482,56.5353516774197,69.5323461717856,64.7791147635918,60.3934204473974,24.4595604466185,28.9439075208989,60.291813649949,47.3233132339763,29.2387673494333,41.5571457561119,42.2354671340985,25.5375325645481,26.9653286652964,23.8602451609281,20.5230943636266,22.9670723431721,41.2671219945674,70.5795625778748,109.566253073858,213.320010945999,31.6076919876373,36.9905403593644,26.7927955857835,35.3970027129086,40.1353719653116,38.14962973966,21.3386951922347,21.3125834818499,23.9840117146301,27.2807979400247,38.0987411119684,23.625319169979,35.3488803860155,23.2804964641058,36.2690326299448,27.1768307911647,31.3594956213759,31.0320162006542,61.5092812019803,76.7085688170254,80.0086420027398,42.9167852750434,36.9030583478234,43.1929966315254,40.2812619821615,56.4710710556182,57.1875753523283,65.5915718029152,65.5317687124882,79.0160763150721,60.8818970559511,66.3566765947129,33.4033113429037,45.0353233608537,54.5881158216737,43.5614641685001,24.592763719951,23.2201125477808,26.4691330813863,32.8536502881859,49.4625348830154,49.1956685893823,47.1319674535436,58.2082584162785,15.9520314770303,28.5550181053407,28.6800332387237,23.6731391021781,36.1461423993277,33.7804601526502,37.6581309626537,24.6802490854932,37.9195121149147,33.9699237391424,40.3512169141742,22.7838349789052,27.9086011377504,22.3276956211658,26.0419209143731,27.5469924446365,25.7626078521922,20.6955210827863,24.9494263301646,30.0086929883626,25.6713365865029,26.5951291808134,33.5624871519843,34.3569970449531,29.8588156795829,31.9411276649685,72.760322203188,61.6398628151914,78.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|EntrezGene=227446
|HGNC=
|MCL_coexpression_id=3219
|UniProt=E9QM90,G3X9J4,Q148V7,Q9D743
|association_with_transcript=8bp_to_ENSMUST00000039173,ENSMUST00000086721,NM_029349,NM_173187,uc007cgi.2,uc007cgj.2,uc007cgk.2,uc007cgl.2,uc007cgm.2_5end
|description=CAGE_peak_1_at_2310035C23Rik_5end
|id=chr1:107560446..107560497,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!1.71e-11!99;UBERON:0002020!1.80e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0007811!6.18e-09!86;UBERON:0002616!1.00e-08!49;UBERON:0002791!1.58e-08!29;UBERON:0003528!1.58e-08!29;UBERON:0001893!1.58e-08!29;UBERON:0001017!2.73e-08!73;UBERON:0005743!2.73e-08!73;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000033!6.56e-08!63;UBERON:0000073!1.80e-07!75;UBERON:0001016!1.80e-07!75;UBERON:0003080!5.05e-07!40;UBERON:0000153!6.10e-07!94;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-10,54;UBERON:0002020,1.80e-10,34;UBERON:0001049,1.56e-09,52;UBERON:0005068,1.56e-09,52;UBERON:0006241,1.56e-09,52;UBERON:0007135,1.56e-09,52;UBERON:0010371,3.66e-09,73;UBERON:0011216,6.08e-09,194;UBERON:0003528,1.58e-08,29;UBERON:0002791,1.58e-08,29;UBERON:0001893,1.58e-08,29;UBERON:0001017,2.73e-08,73;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000955,7.11e-08,47;UBERON:0006238,7.11e-08,47;UBERON:0004121,8.74e-08,95;UBERON:0000924,8.74e-08,95;UBERON:0006601,8.74e-08,95;UBERON:0002346,1.26e-07,64;UBERON:0003075,1.26e-07,64;UBERON:0007284,1.26e-07,64;UBERON:0001016,1.80e-07,75;UBERON:0002616,1.90e-07,46;UBERON:0003080,5.05e-07,40;UBERON:0002780,9.89e-07,39;UBERON:0001890,9.89e-07,39;UBERON:0006240,9.89e-07,39
|phase1_expression=47.5642075901238,80.6133191646924,79.6248668931688,110.7019013383,113.202434967874,57.0789524500425,56.5342590241172,64.0451684270218,37.8721662587984,43.0678728432468,34.243593645101,30.3931925772232,63.8578722643397,65.3904610094101,44.6367080832988,45.9618856974905,48.2697695908421,68.1398277173793,73.6304508462817,68.3267339394829,34.8677489619386,27.8014663362479,35.5231713228952,34.5583633233758,36.0172571275457,58.5716603397321,53.4144875237253,52.5749807753569,53.0165340283283,46.8776041353471,43.2374495777844,28.5763803056834,27.0628506537211,31.6963362030877,44.7720010614476,29.5897668738116,40.0171938274243,69.4762507023267,53.1308034276184,49.7347556775108,61.7643062432565,60.1080026763432,62.6308355410188,32.6072758556745,35.4819259268301,36.892897184498,30.5132624295735,13.7355848519681,14.2796018777407,19.8318497055769,18.6181940761732,11.5002051491977,54.8649121808798,63.8318684969983,62.5134466404983,27.2695002198104,30.3725446335082,33.5186859980338,46.5327859977075,61.3629535955558,46.2696924559511,18.9752937958714,12.450127145556,26.996991518442,32.6325899647102,24.8668040231135,19.7736072942147,20.7477884873639,42.9274994957098,38.7467043011952,39.7514176954112,54.8449890055303,55.438003778855,44.4641601150283,38.7215702913675,41.3648453974509,77.0811166995721,64.7374804091902,66.2044158334409,57.2386488749041,56.1734131718795,59.9050376140274,56.394965798279,63.0294123235482,56.5353516774197,69.5323461717856,64.7791147635918,60.3934204473974,24.4595604466185,28.9439075208989,60.291813649949,47.3233132339763,29.2387673494333,41.5571457561119,42.2354671340985,25.5375325645481,26.9653286652964,23.8602451609281,20.5230943636266,22.9670723431721,41.2671219945674,70.5795625778748,109.566253073858,213.320010945999,31.6076919876373,36.9905403593644,26.7927955857835,35.3970027129086,40.1353719653116,38.14962973966,21.3386951922347,21.3125834818499,23.9840117146301,27.2807979400247,38.0987411119684,23.625319169979,35.3488803860155,23.2804964641058,36.2690326299448,27.1768307911647,31.3594956213759,31.0320162006542,61.5092812019803,76.7085688170254,80.0086420027398,42.9167852750434,36.9030583478234,43.1929966315254,40.2812619821615,56.4710710556182,57.1875753523283,65.5915718029152,65.5317687124882,79.0160763150721,60.8818970559511,66.3566765947129,33.4033113429037,45.0353233608537,54.5881158216737,43.5614641685001,24.592763719951,23.2201125477808,26.4691330813863,32.8536502881859,49.4625348830154,49.1956685893823,47.1319674535436,58.2082584162785,15.9520314770303,28.5550181053407,28.6800332387237,23.6731391021781,36.1461423993277,33.7804601526502,37.6581309626537,24.6802490854932,37.9195121149147,33.9699237391424,40.3512169141742,22.7838349789052,27.9086011377504,22.3276956211658,26.0419209143731,27.5469924446365,25.7626078521922,20.6955210827863,24.9494263301646,30.0086929883626,25.6713365865029,26.5951291808134,33.5624871519843,34.3569970449531,29.8588156795829,31.9411276649685,72.760322203188,61.6398628151914,78.3092515671601,38.874233299541,22.82184280727,31.1197140292988,31.1859256399466,39.1266037769284,41.5846941989907,40.8985096142002,47.4529061544512,31.6221993070101,52.7803938480566,53.9172039231519,55.174836654711,47.6374286586737,51.2247178203025,66.1149027204499,11.7594098590911,27.7623885641641,23.6686244913469,29.3257912097252,28.8989205879762,39.9072815175913,42.8743721702464,37.1977572908597,38.6216870489782,39.7338867828198,24.0126627940591,27.3625973374394,27.3217003207352,28.1077640481067,31.6461789366065,27.0118418922707,32.3374831762403,33.0850558068432,39.7231305598837,29.1035097979366,50.3188722845741,40.9355042435354,29.9556166189978,37.6342528141196,30.676957712247,44.3848039654298,40.645701836653,23.4969350595401,26.5632911600502,26.140743209379,29.8056615326398,37.5214016669667,42.6098117185965,50.5396147951699,48.0787189523883,46.286120136594,51.0255259703959,44.2430949732493,45.7615201944623,46.8662949804097,63.3323392544944,62.0052479553329,59.5034770353034,52.1520450515944,58.4404147555563,58.3714199229172,19.180388609071,23.2273253028023,29.0267561862956,27.3307121007647,40.715022171499,31.0659437338318,42.1089494015725,39.3476377796477,43.3147450792137,39.7467966759384,44.6675189079572,69.4054043471103,37.7560626653995,22.7923972694087,39.7444180822726,43.5521124647494,38.4960901185892,21.1219153454834,20.8603254305678,32.2514686382586,17.7181135728464,25.8245524272899,44.449666424934,39.6251765130481,36.3627325952416,38.5564844681696,27.4088382294997,37.1287955693473,54.1298973148523,28.9898361390409,19.4038025674132,30.0071849044229,39.9015525695116,31.9280183507706,38.9981178827027,34.1000743008351,27.6912615515178,25.4198485036584,45.4288499993222,40.891790729487,49.7310434223389,45.1140678462606,42.3771821211134,61.716978304143,49.2602613904448,57.110993019237,36.9081102523362,24.147263551697,28.5199572149356,45.2084296811258,44.9724009202173,40.722514830761,46.7440682483102,40.3060182692135,39.1105925866519,27.6854479224383,17.3984796469624,26.2282112593635,35.857773152838,41.3994826108648,38.4318112193273,37.3574239485953,47.5257370420682,41.8809507174447,92.6747059036319,29.8242870281724,33.2578833823672,29.9033092087958,24.6533150781075,30.5288365700155,25.1861655781576,28.8914974589231,39.1973177076818,35.8062058320863,55.7851712344782,44.9346464736371,39.1720808510697,49.9297570592522,23.1106745430787,21.980144833273,26.633768710448,33.2989653941516,30.9942913458773,44.7127072214284,37.365450375168,41.699143828585,50.3726991989549,44.6660000156203,54.7713289757409,56.0915036763121,64.8666807107708,40.1312778998924,22.1985953374065,22.7873195788068,23.0001924418787,49.6497256662729,34.7212579584687,54.579184031645,55.0926734233199,40.6273404268644,103.91433904154,94.8269987204784,93.954864204061,87.8169761776244,99.3369653667431,98.2012066606611,97.8782625336118,91.865525457741,97.425617931604,100.445500479853,19.0968719554885,39.9024873401031,31.9271842760231,32.0900866530148,24.5247400274739,28.8634308266522,37.7819437262746,34.4078545588953,32.7337593783652,30.8290598351833,41.3171258821091,35.8390048633545,35.7710558534951,35.6620098895122,35.3802488766578,40.0086700677782,38.0100589099126,34.7236596834669,31.7306143618546,34.444547311449,38.7442255195519,36.7374918749829,36.0038646820455,40.5516502404197,35.855673938241,41.2073140432465,40.9758659235011,28.6745985467249,43.185708202984,39.8411012876994,38.0818408178599,37.5302077850897,49.1077251803627,37.3397787258178,43.9827073037002,41.2187453597611,31.8146987485755,43.4039529177563,28.3106731461888,30.2210244193736,33.3889683293407
|short_description=p1@2310035C23Rik
}}

Revision as of 18:32, 13 September 2013

Short description:p1@2310035C23Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_2310035C23Rik_5end
Coexpression cluster:MCL_coexpression_mm9:3219
Association with transcript: 8bp_to_ENSMUST00000039173, ENSMUST00000086721, NM_029349, NM_173187, uc007cgi.2, uc007cgj.2, uc007cgk.2, uc007cgl.2, uc007cgm.2_5end
EntrezGene:2310035C23Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@2310035C23Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G747.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I580.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I679.62
CD326+ enterocyte, pool1.CNhs13542.11848-124I3110.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I4113.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I757.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I856.53
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E737.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E634.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F130.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E463.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E865.39
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A144.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A345.96
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A548.27
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A268.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A473.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A668.33
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I935.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.02
GP2+ M cell, pool1.CNhs13228.11845-124H958.57
GP2+ M cell, pool2.CNhs13231.11846-124I153.41
GP2+ M cell, pool3.CNhs13240.11847-124I252.57
Ileum epithelium, pool1.CNhs13199.10252-104B953.02
Ileum epithelium, pool2.CNhs13232.10253-104C146.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C843.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I328.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F544.77
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.59
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F740.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G869.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H153.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H349.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H260.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H462.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D935.48
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B730.51
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A254.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I963.83
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A162.51
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.52
Mouse Granule cells, donor1.CNhs12131.11713-123C346.53
Mouse Granule cells, donor2.CNhs12357.11731-123E361.36
Mouse Granule cells, donor3.CNhs12108.11636-122C746.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E732.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.87
Mouse Microglia, donor1.CNhs12629.11718-123C819.77
Mouse Microglia, donor2.CNhs12634.11736-123E820.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D542.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D939.75
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F154.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D244.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D641.36
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D377.08
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F364.74
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D766.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D457.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.17
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D859.91
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E456.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E563.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D669.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F664.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E160.39
Mouse Schwann, donor1.CNhs12507.11728-123D924.46
Mouse Schwann, donor2.CNhs12573.11746-123F928.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G360.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F747.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C841.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F442.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E320.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.97
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G641.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H170.58
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8109.57
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6213.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G131.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G236.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.40
accessory axillary lymph node, adult.CNhs10475.1063-29H940.14
adrenal gland, adult.CNhs10508.49-24D738.15
adrenal gland, embryo E14.CNhs11038.406-44C521.34
adrenal gland, embryo E16.CNhs11004.1254-43D621.31
adrenal gland, embryo E17.CNhs11043.1263-45I123.98
adrenal gland, embryo E18.CNhs11026.1262-18F527.28
adrenal gland, neonate N00.CNhs11191.1311-23C138.10
adrenal gland, neonate N25.CNhs11223.1377-27I323.63
amnion, adult pregnant day17.5.CNhs10488.583-22A835.35
aorta, adult.CNhs10498.46-23H123.28
bone (os femoris), adult.CNhs10483.56-12G236.27
bone (os femoris), neonate N02.CNhs11227.1985-43F527.18
bone (os femoris), neonate N16.CNhs11225.1525-43A631.36
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H461.51
cerebellum, adult.CNhs10494.15-8B276.71
cerebellum, neonate N30.CNhs11135.1395-42I280.01
colon, adult.CNhs10468.36-18H742.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D143.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D440.28
corpora quadrigemina, adult.CNhs10501.16-22A456.47
corpus striatum, adult.CNhs10487.19-21D857.19
corpus striatum, neonate N00.CNhs11226.630-43F165.59
cortex, adult.CNhs10473.12-14D565.53
cortex, neonate N30.CNhs11107.1392-42F279.02
diencephalon, adult.CNhs10482.20-12F260.88
diencephalon, neonate N30.CNhs11201.1388-42B266.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A245.04
epididymis, adult.CNhs10490.58-23B254.59
eyeball, adult.CNhs10484.31-12G443.56
eyeball, embryo E12.CNhs11016.345-16C624.59
eyeball, embryo E14.CNhs10521.399-16E223.22
eyeball, embryo E15.CNhs10593.426-16C926.47
eyeball, embryo E17.CNhs11023.1261-18D432.85
eyeball, neonate N00.CNhs11207.633-15C649.46
eyeball, neonate N01.CNhs11140.1532-43E749.20
eyeball, neonate N02.CNhs11205.1551-44G847.13
eyeball, neonate N16.CNhs11188.777-19A258.21
forelimb, embryo E11.CNhs10596.335-25E215.95
forelimb, embryo E12.CNhs10600.359-14H228.56
forelimb, embryo E13.CNhs10589.384-1E228.68
forelimb, embryo E14.CNhs10577.413-26A823.67
forelimb, embryo E15.CNhs11007.437-20E736.15
forelimb, embryo E17.CNhs10598.1517-43C433.78
forelimb, embryo E18.CNhs11008.1520-43B537.66
gonad, embryo E13.CNhs11044.1564-45I624.68
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C837.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D233.97
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D540.35
heart, embryo E11.CNhs10586.331-24E922.78
heart, embryo E12.CNhs11015.353-12F527.91
heart, embryo E13.CNhs11013.376-3I922.33
heart, embryo E14.CNhs10597.403-26D426.04
heart, embryo E15.CNhs11017.431-16C827.55
heart, embryo E16.CNhs11021.457-17C625.76
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G324.95
heart, neonate N00.CNhs11213.639-21E330.01
heart, neonate N03.CNhs11221.1349-25I225.67
heart, neonate N10.CNhs11118.749-24G126.60
heart, neonate N16.CNhs11209.782-15G133.56
heart, neonate N20.CNhs11127.821-26I634.36
heart, neonate N25.CNhs11196.1351-25D329.86
heart, neonate N30.CNhs11202.1390-42D231.94
hippocampus, adult.CNhs10478.13-16E872.76
hippocampus, neonate N00.CNhs11228.627-43G161.64
intestinal mucosa, adult.CNhs10506.860-29I378.31
intestine, adult.CNhs10496.178-9A338.87
intestine, embryo E12.CNhs11019.1251-16I522.82
intestine, embryo E13.CNhs11010.381-16D531.12
intestine, embryo E15.CNhs10602.976-16D831.19
intestine, embryo E16.CNhs10585.463-22H439.13
intestine, embryo E17.CNhs10582.482-18D341.58
intestine, embryo E18.CNhs10526.1289-20F740.90
intestine, neonate N00.CNhs11126.644-26D147.45
intestine, neonate N01.CNhs11192.1322-23E931.62
intestine, neonate N06.CNhs11102.688-20B852.78
intestine, neonate N07.CNhs11095.720-20F253.92
intestine, neonate N10.CNhs11098.755-23A555.17
intestine, neonate N20.CNhs11187.827-18D147.64
intestine, neonate N25.CNhs11121.1352-25E351.22
intestine, neonate N30.CNhs11131.1384-42G166.11
kidney, embryo E14.CNhs10606.411-4I911.76
kidney, embryo E15.CNhs10997.434-16F827.76
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I229.33
kidney, embryo E18.CNhs11001.1288-20C728.90
kidney, neonate N00.CNhs11214.646-21G739.91
kidney, neonate N10.CNhs11206.758-6D542.87
kidney, neonate N20.CNhs11113.832-19I137.20
kidney, neonate N25.CNhs11122.1353-25F338.62
kidney, neonate N30.CNhs11203.1385-42H139.73
liver, adult pregnant day01.CNhs10466.508-5B224.01
liver, embryo E12.CNhs10601.355-15F827.36
liver, embryo E13.CNhs10524.378-3H627.32
liver, embryo E14.CNhs10594.409-16E128.11
liver, embryo E15.CNhs10520.433-16D731.65
liver, embryo E16.CNhs10523.462-17F527.01
liver, embryo E17.CNhs10510.481-18A332.34
liver, embryo E18.CNhs10579.499-43G433.09
liver, neonate N00.CNhs11117.641-24F439.72
liver, neonate N03.CNhs11123.1345-25G229.10
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H240.94
liver, neonate N10.CNhs11115.751-24B929.96
liver, neonate N20.CNhs11220.823-25A337.63
liver, neonate N25.CNhs11198.1368-26H130.68
liver, neonate N30.CNhs11106.1382-42D144.38
lung, adult.CNhs10474.28-22B140.65
lung, embryo E12.CNhs10522.354-16G223.50
lung, embryo E14.CNhs10604.404-26F826.56
lung, embryo E15.CNhs11020.432-17C526.14
lung, embryo E16.CNhs10998.458-17B629.81
lung, embryo E17.CNhs10605.480-44A637.52
lung, embryo E18.CNhs10583.1287-20I642.61
lung, neonate N00.CNhs11224.640-42C650.54
lung, neonate N06.CNhs11212.683-20E548.08
lung, neonate N07.CNhs11111.715-19A346.29
lung, neonate N10.CNhs11219.750-23E651.03
lung, neonate N20.CNhs11109.822-18A444.24
lung, neonate N25.CNhs11119.1359-25C745.76
lung, neonate N30.CNhs11133.1394-42H246.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A163.33
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A162.01
mammary gland, adult lactating day02.CNhs10480.595-22B659.50
mammary gland, adult pregnant day19.CNhs10476.588-5H252.15
medulla oblongata, adult.CNhs10477.17-12C258.44
medulla oblongata, neonate N30.CNhs11200.1396-42A358.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E340.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D842.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.35
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D443.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D539.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D644.67
olfactory brain, adult.CNhs10489.18-22I969.41
ovary, adult.CNhs10507.91-2I737.76
ovary, embryo E18.CNhs11040.505-44H722.79
ovary, neonate N00.CNhs11217.1299-22I439.74
oviduct, adult pregnant day01.CNhs10500.988-6G643.55
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F421.12
pancreas, embryo E15.CNhs11042.1556-45F220.86
pancreas, embryo E16.CNhs11003.460-26E532.25
pancreas, embryo E17.CNhs10599.1558-45G317.72
pancreas, embryo E18.CNhs10580.1535-43I725.82
pancreas, neonate N00.CNhs11105.645-26G944.45
pancreas, neonate N01.CNhs11138.1531-43D739.63
pancreas, neonate N02.CNhs11139.1539-43D836.36
pancreas, neonate N16.CNhs11136.787-43B638.56
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G854.13
pituitary gland, embryo E12.CNhs11018.346-16E628.99
pituitary gland, embryo E13.CNhs11009.370-44C719.40
pituitary gland, embryo E14.CNhs11037.398-44A530.01
pituitary gland, embryo E15.CNhs10592.427-16B939.90
pituitary gland, embryo E16.CNhs11036.449-43F631.93
pituitary gland, embryo E17.CNhs11039.1265-44F539.00
pituitary gland, neonate N00.CNhs11190.1308-22E934.10
placenta, adult pregnant day10.CNhs10472.539-13I727.69
placenta, adult pregnant day17.CNhs10464.577-18G325.42
prostate, adult.CNhs10470.859-1F845.43
skin, adult.CNhs10492.30-1C340.89
skin, neonate N00.CNhs11124.650-25G449.73
skin, neonate N03.CNhs11215.662-22H345.11
skin, neonate N06.CNhs11097.693-20I542.38
skin, neonate N10.CNhs11108.762-6C461.72
small intestine, neonate N16.CNhs11114.790-21I149.26
spinal cord, adult.CNhs10505.24-13C957.11
spleen, adult.CNhs10465.25-2G236.91
spleen, embryo E16.CNhs11035.461-43C124.15
spleen, embryo E18.CNhs11011.1271-21F228.52
spleen, neonate N10.CNhs11116.752-24D145.21
spleen, neonate N20.CNhs11112.824-19H144.97
spleen, neonate N25.CNhs11099.1354-25G340.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C646.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C940.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.11
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E317.40
stomach, embryo E15.CNhs10603.1252-16G826.23
stomach, embryo E16.CNhs11022.459-17D435.86
stomach, embryo E17.CNhs11006.1035-18D541.40
stomach, embryo E18.CNhs10999.1286-20C638.43
stomach, neonate N03.CNhs11193.1340-24B837.36
stomach, neonate N07.CNhs11210.718-18A947.53
stomach, neonate N25.CNhs11104.1355-25E441.88
stomach, neonate N30.CNhs11134.1386-42I192.67
submandibular gland, adult.CNhs10469.59-29C129.82
testis, adult.CNhs10504.57-7G533.26
testis, embryo E13.CNhs11031.389-23F529.90
testis, embryo E15.CNhs11034.443-27C524.65
testis, embryo E16.CNhs11033.470-26G530.53
testis, embryo E17.CNhs11029.486-18I525.19
testis, embryo E18.CNhs11027.503-18G528.89
testis, neonate N00.CNhs11189.1300-22B739.20
testis, neonate N07.CNhs11222.726-26I435.81
testis, neonate N10.CNhs11204.763-44D955.79
testis, neonate N20.CNhs11110.839-18H344.93
testis, neonate N30.CNhs11130.1391-42E239.17
thymus, adult.CNhs10471.38-12B549.93
thymus, embryo E14.CNhs11041.402-44I423.11
thymus, embryo E15.CNhs11005.430-45I221.98
thymus, embryo E16.CNhs11002.456-26C526.63
thymus, embryo E17.CNhs10581.478-18C133.30
thymus, embryo E18.CNhs10595.1273-19G430.99
thymus, neonate N02.CNhs11181.1541-43F844.71
thymus, neonate N03.CNhs11137.2104-43C737.37
thymus, neonate N06.CNhs11197.681-26C441.70
thymus, neonate N07.CNhs11211.713-19D350.37
thymus, neonate N10.CNhs11194.748-24E444.67
thymus, neonate N20.CNhs11186.820-7A254.77
thymus, neonate N25.CNhs11125.1362-25G756.09
thymus, neonate N30.CNhs11132.1393-42G264.87
tongue, adult.CNhs10499.32-1B440.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F722.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.00
urinary bladder, adult.CNhs10481.879-12E449.65
uterus, adult pregnant day19.CNhs10497.590-15F534.72
uterus, adult.CNhs10509.92-27E554.58
vagina, adult.CNhs10502.89-27D555.09
vesicular gland, adult.CNhs10491.51-27F840.63
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1103.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A294.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A393.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D787.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A499.34
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A598.20
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A697.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A791.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A897.43
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.45
whole body, embryo E11.CNhs11014.324-5I819.10
whole body, embryo E12.CNhs10587.857-27C939.90
whole body, embryo E13.CNhs10512.372-23H231.93
whole body, embryo E14.5.CNhs10578.420-27D232.09
whole body, embryo E14.CNhs10519.395-14B124.52
whole body, embryo E16.CNhs10514.453-14F228.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G537.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G532.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G541.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G535.84
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G535.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G540.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G534.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G536.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G540.55
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G541.21
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G543.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.84
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G538.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G549.11
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G537.34
whole body, embryo E17.5.CNhs10513.490-9F943.98
whole body, embryo E17.CNhs10517.475-3I541.22
whole body, embryo E18.CNhs10516.493-3B331.81
whole body, neonate N00.CNhs10525.657-19C243.40
whole body, neonate N01.CNhs10576.659-23C628.31
whole body, neonate N06.CNhs10515.692-21D130.22
whole body, neonate N10.CNhs10518.761-6B433.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.44e-1054
gray matter1.80e-1034
neural tube1.56e-0952
neural rod1.56e-0952
future spinal cord1.56e-0952
neural keel1.56e-0952
ecto-epithelium3.66e-0973
organ system subdivision6.08e-09194
brain grey matter1.58e-0829
regional part of telencephalon1.58e-0829
telencephalon1.58e-0829
central nervous system2.73e-0873
occipital lobe6.52e-0810
visual cortex6.52e-0810
neocortex6.52e-0810
brain7.11e-0847
future brain7.11e-0847
ectoderm-derived structure8.74e-0895
ectoderm8.74e-0895
presumptive ectoderm8.74e-0895
neurectoderm1.26e-0764
neural plate1.26e-0764
presumptive neural plate1.26e-0764
nervous system1.80e-0775
regional part of brain1.90e-0746
anterior neural tube5.05e-0740
regional part of forebrain9.89e-0739
forebrain9.89e-0739
future forebrain9.89e-0739







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