FFCP PHASE1:Mm9::chr19:6015152..6015198,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12333|HGNC=|MCL_coexpression_id=163|UniProt=O35350|association_with_transcript=0bp_to_ENSMUST00000167604_5end|description=CAGE_peak_1_at_Capn1_5end|id=chr19:6015152..6015198,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.27e-14!130;UBERON:0000925!4.27e-14!130;UBERON:0006595!4.27e-14!130;UBERON:0001007!1.38e-13!128;UBERON:0001555!1.38e-13!128;UBERON:0007026!1.38e-13!128;UBERON:0004921!1.10e-12!126;UBERON:0004185!1.10e-12!126;UBERON:0004923!2.36e-11!24;UBERON:0005409!2.55e-10!59;UBERON:0000344!1.76e-09!15;UBERON:0001242!1.81e-08!13;UBERON:0000060!1.81e-08!13;UBERON:0001262!1.81e-08!13;UBERON:0004786!1.81e-08!13;UBERON:0000160!3.92e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.15e-16,118;UBERON:0000925,1.15e-16,118;UBERON:0006595,1.15e-16,118;UBERON:0001007,3.96e-16,116;UBERON:0001555,3.96e-16,116;UBERON:0007026,3.96e-16,116;UBERON:0004921,3.82e-15,114;UBERON:0005409,1.32e-14,47;UBERON:0000160,1.46e-11,31;UBERON:0004923,2.35e-11,24;UBERON:0000344,1.75e-09,15;UBERON:0001242,1.80e-08,13;UBERON:0001262,1.80e-08,13;UBERON:0004786,1.80e-08,13|phase1_expression=8.16759120234449,153.549179361319,146.509755083431,140.040929835062,167.29917380208,75.0420345446147,65.6451520073427,52.8114392876047,11.9670413828917,14.2779361056416,10.7867319982068,12.5242289622678,55.2978357677794,58.0471472062143,56.295549746847,59.325253345219,44.7719602002014,33.2812584452941,25.0919413498502,31.8292238848523,15.7330086779479,29.2908306042612,22.2019820768095,76.9563553636286,80.5226576545767,118.291784607694,99.5060211127463,91.3598026588169,187.173068164528,120.974462284767,77.162217708046,46.3572391625531,49.8202477943502,47.5445043046316,62.9696531057779,58.0158912301138,61.2508068787107,238.563029520037,141.421697358808,159.674741912008,238.821984140592,221.989782611495,213.139044980676,37.3913549387465,35.8874336517082,23.3104375245336,93.1045699774167,22.6746162635664,40.6419438058773,29.9422044574396,46.1955191363696,30.188038516644,17.7849562421201,48.5992635147601,52.4306326662244,27.0122407837744,33.2378790328958,27.8462929829819,0.404632921719196,0.528990979272033,0,54.8928141951994,49.8005085822238,57.1436320473688,64.2763135668533,62.5222501152568,25.166409283546,29.5848095097597,0.414758449233911,0.540023753326763,0.420649922702764,1.99955689082663,2.87129103237098,0.122490799214954,0.191690942036473,0,1.10115880999389,3.31987079021488,2.61131106535614,0.395658863190582,0.548925861614458,0.52091337055676,3.62937898701795,2.25105044012672,3.97275444219706,2.65165726926301,2.98980529678116,0.931997229126503,13.4035362199736,22.898182712356,19.7107852317141,7.74381489283248,7.47968467078526,7.01614149129162,10.3964226791627,14.7848872742121,26.2631065646376,35.6199374188141,23.3807404142582,25.7937889392548,8.45060518660083,21.815501160434,17.8363667794652,21.3320010945999,17.5357743219083,21.5355885653834,21.2320266906209,24.2069825004407,34.697676408721,29.5399856739001,9.71517829890361,16.4411358288556,19.1410862722529,11.6056433225519,14.2282335634203,23.4996525786493,30.404981031328,21.4007048241469,62.8073491884411,19.7355556935839,30.4761295475343,26.183263669302,78.2845397116113,11.4184510834503,8.58731497935166,104.737392635522,13.6589241936749,9.59844369589452,13.723584523891,2.09706895166752,3.20250421973039,0.376963056338593,1.73824320192276,2.04572365864264,3.74018480207208,1.29793010454206,10.0820970211813,38.814974830349,57.6207889228778,33.4602550859494,0.910843100738926,2.75882525320168,4.86167750474443,7.68594570962147,4.83059143974428,5.50888997224854,5.43470002446427,21.2136764005993,1.72454394346274,3.78212160335639,4.57472922826267,9.86380795924087,19.7413546950174,44.9245294813595,45.0662878733396,5.37392520409932,12.6398373716382,11.5806558201622,15.0606654679664,8.49215667395558,7.50483391939508,3.24111710629827,5.44512891845984,6.29645541591692,5.707883176833,5.34828072925938,4.82892122519315,6.42209383019432,7.40519324610662,7.38753588355929,8.83650024049827,8.04099930839328,9.66020507280623,10.6023070820694,3.36463917702604,1.74937841044784,109.038198384653,79.5996205657268,3.83918850963421,8.12828351511535,14.0465532841082,19.1599348392175,20.4587800337281,31.7676795607974,99.6511029243474,45.456911503827,65.5984894968703,64.4618969413329,70.7719636242406,109.655967855815,82.1324589523838,101.163766813219,4.55202962287396,8.68288695833939,12.3978509240388,12.6263823264095,13.3827216145662,15.5701520156507,20.6783476396321,21.5510816050219,25.2767951824613,24.8028299482819,12.1545577105731,51.7219827719892,54.250282651244,60.0381840067559,67.75528054376,79.1061083987927,62.1287078346664,37.975890143507,22.698931748505,28.8289483847486,10.0637744569148,17.4906245404197,12.1694692514679,11.36604950762,10.4050499842709,11.0962009913574,37.5048976038208,4.73728529426212,4.88894929326078,6.11082308790677,9.62230017982859,16.0806007144143,21.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| ||
|EntrezGene=12333 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|UniProt=O35350 | |||
|association_with_transcript=0bp_to_ENSMUST00000167604_5end | |||
|description=CAGE_peak_1_at_Capn1_5end | |||
|id=chr19:6015152..6015198,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.27e-14!130;UBERON:0000925!4.27e-14!130;UBERON:0006595!4.27e-14!130;UBERON:0001007!1.38e-13!128;UBERON:0001555!1.38e-13!128;UBERON:0007026!1.38e-13!128;UBERON:0004921!1.10e-12!126;UBERON:0004185!1.10e-12!126;UBERON:0004923!2.36e-11!24;UBERON:0005409!2.55e-10!59;UBERON:0000344!1.76e-09!15;UBERON:0001242!1.81e-08!13;UBERON:0000060!1.81e-08!13;UBERON:0001262!1.81e-08!13;UBERON:0004786!1.81e-08!13;UBERON:0000160!3.92e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.15e-16,118;UBERON:0000925,1.15e-16,118;UBERON:0006595,1.15e-16,118;UBERON:0001007,3.96e-16,116;UBERON:0001555,3.96e-16,116;UBERON:0007026,3.96e-16,116;UBERON:0004921,3.82e-15,114;UBERON:0005409,1.32e-14,47;UBERON:0000160,1.46e-11,31;UBERON:0004923,2.35e-11,24;UBERON:0000344,1.75e-09,15;UBERON:0001242,1.80e-08,13;UBERON:0001262,1.80e-08,13;UBERON:0004786,1.80e-08,13 | |||
|phase1_expression=8.16759120234449,153.549179361319,146.509755083431,140.040929835062,167.29917380208,75.0420345446147,65.6451520073427,52.8114392876047,11.9670413828917,14.2779361056416,10.7867319982068,12.5242289622678,55.2978357677794,58.0471472062143,56.295549746847,59.325253345219,44.7719602002014,33.2812584452941,25.0919413498502,31.8292238848523,15.7330086779479,29.2908306042612,22.2019820768095,76.9563553636286,80.5226576545767,118.291784607694,99.5060211127463,91.3598026588169,187.173068164528,120.974462284767,77.162217708046,46.3572391625531,49.8202477943502,47.5445043046316,62.9696531057779,58.0158912301138,61.2508068787107,238.563029520037,141.421697358808,159.674741912008,238.821984140592,221.989782611495,213.139044980676,37.3913549387465,35.8874336517082,23.3104375245336,93.1045699774167,22.6746162635664,40.6419438058773,29.9422044574396,46.1955191363696,30.188038516644,17.7849562421201,48.5992635147601,52.4306326662244,27.0122407837744,33.2378790328958,27.8462929829819,0.404632921719196,0.528990979272033,0,54.8928141951994,49.8005085822238,57.1436320473688,64.2763135668533,62.5222501152568,25.166409283546,29.5848095097597,0.414758449233911,0.540023753326763,0.420649922702764,1.99955689082663,2.87129103237098,0.122490799214954,0.191690942036473,0,1.10115880999389,3.31987079021488,2.61131106535614,0.395658863190582,0.548925861614458,0.52091337055676,3.62937898701795,2.25105044012672,3.97275444219706,2.65165726926301,2.98980529678116,0.931997229126503,13.4035362199736,22.898182712356,19.7107852317141,7.74381489283248,7.47968467078526,7.01614149129162,10.3964226791627,14.7848872742121,26.2631065646376,35.6199374188141,23.3807404142582,25.7937889392548,8.45060518660083,21.815501160434,17.8363667794652,21.3320010945999,17.5357743219083,21.5355885653834,21.2320266906209,24.2069825004407,34.697676408721,29.5399856739001,9.71517829890361,16.4411358288556,19.1410862722529,11.6056433225519,14.2282335634203,23.4996525786493,30.404981031328,21.4007048241469,62.8073491884411,19.7355556935839,30.4761295475343,26.183263669302,78.2845397116113,11.4184510834503,8.58731497935166,104.737392635522,13.6589241936749,9.59844369589452,13.723584523891,2.09706895166752,3.20250421973039,0.376963056338593,1.73824320192276,2.04572365864264,3.74018480207208,1.29793010454206,10.0820970211813,38.814974830349,57.6207889228778,33.4602550859494,0.910843100738926,2.75882525320168,4.86167750474443,7.68594570962147,4.83059143974428,5.50888997224854,5.43470002446427,21.2136764005993,1.72454394346274,3.78212160335639,4.57472922826267,9.86380795924087,19.7413546950174,44.9245294813595,45.0662878733396,5.37392520409932,12.6398373716382,11.5806558201622,15.0606654679664,8.49215667395558,7.50483391939508,3.24111710629827,5.44512891845984,6.29645541591692,5.707883176833,5.34828072925938,4.82892122519315,6.42209383019432,7.40519324610662,7.38753588355929,8.83650024049827,8.04099930839328,9.66020507280623,10.6023070820694,3.36463917702604,1.74937841044784,109.038198384653,79.5996205657268,3.83918850963421,8.12828351511535,14.0465532841082,19.1599348392175,20.4587800337281,31.7676795607974,99.6511029243474,45.456911503827,65.5984894968703,64.4618969413329,70.7719636242406,109.655967855815,82.1324589523838,101.163766813219,4.55202962287396,8.68288695833939,12.3978509240388,12.6263823264095,13.3827216145662,15.5701520156507,20.6783476396321,21.5510816050219,25.2767951824613,24.8028299482819,12.1545577105731,51.7219827719892,54.250282651244,60.0381840067559,67.75528054376,79.1061083987927,62.1287078346664,37.975890143507,22.698931748505,28.8289483847486,10.0637744569148,17.4906245404197,12.1694692514679,11.36604950762,10.4050499842709,11.0962009913574,37.5048976038208,4.73728529426212,4.88894929326078,6.11082308790677,9.62230017982859,16.0806007144143,21.4239276797412,22.4403695036469,30.8964882448134,21.2606102062824,29.1802226643201,37.8524256993355,34.8823663369109,38.3320005241006,24.1266054302836,26.6513785071168,13.277635371514,16.0043312856745,6.90367536947505,4.10240903072711,22.1312176258512,24.4896799388242,2.2085575359138,3.12350995437311,4.09304455692318,7.16906393857656,4.90157082981267,6.79383673893198,6.07216052512342,4.38383786866968,4.74345333535828,1.92792789853084,24.1298144854057,11.0400674273698,14.985600260529,30.6844428728916,11.9470624505967,11.1679092631291,10.2790009368015,9.24164890803901,12.1073776081117,8.9156192903739,18.3484088149437,17.0860852854428,15.329387270543,8.21695570633122,14.7586052004998,13.4076206222643,10.5536277783674,1.98067203434441,2.8458910432206,2.7863814554107,3.54680467284547,6.42127743367454,6.41741180348272,4.26250928760439,51.1584323578889,28.5973295666157,92.621927183084,76.8369938707297,50.2154367024266,53.3769385614179,72.6977574979101,75.9972365819634,85.986846805806,8.52956389248344,65.1018055839819,23.9408766837338,37.4092945286818,59.147695499473,57.9583525537147,61.9988849389676,14.10820968949,21.9723780148143,17.4131966993574,55.3708958448766,4.74503990371703,15.0456405673868,24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| |||
|short_description=p1@Capn1 | |||
}} |
Revision as of 18:17, 13 September 2013
Short description: | p1@Capn1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Capn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 0bp_to_ENSMUST00000167604_5end |
EntrezGene: | Capn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.15e-16 | 118 |
endoderm | 1.15e-16 | 118 |
presumptive endoderm | 1.15e-16 | 118 |
digestive system | 3.96e-16 | 116 |
digestive tract | 3.96e-16 | 116 |
primitive gut | 3.96e-16 | 116 |
subdivision of digestive tract | 3.82e-15 | 114 |
gastrointestinal system | 1.32e-14 | 47 |
intestine | 1.46e-11 | 31 |
organ component layer | 2.35e-11 | 24 |
mucosa | 1.75e-09 | 15 |
intestinal mucosa | 1.80e-08 | 13 |
wall of intestine | 1.80e-08 | 13 |
gastrointestinal system mucosa | 1.80e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.