FFCP PHASE1:Mm9::chr10:57504665..57504709,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12140|HGNC=|MCL_coexpression_id=1027|UniProt=P51880|association_with_transcript=0bp_to_ENSMUST00000020024_5end|description=CAGE_peak_2_at_Fabp7_5end|id=chr10:57504665..57504709,+|ontology_enrichment_celltype=CL:0000221!7.32e-17!44;CL:0000133!7.32e-17!44;CL:0002319!3.78e-16!43;CL:0000055!9.57e-14!50;CL:0000540!1.44e-13!33;CL:0000047!1.44e-13!33;CL:0000031!1.44e-13!33;CL:0000404!1.44e-13!33;CL:0000393!4.48e-11!39;CL:0000211!4.48e-11!39;CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23;CL:0000107!2.81e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,3.82e-21,44;CL:0000133,3.82e-21,44;CL:0002319,3.22e-20,43;CL:0000540,4.73e-17,33;CL:0000047,4.73e-17,33;CL:0000031,4.73e-17,33;CL:0000404,4.73e-17,33;CL:0000393,2.52e-14,39;CL:0000211,2.52e-14,39;CL:0000117,4.30e-09,23;CL:0000337,4.30e-09,23;CL:0000107,5.11e-09,9;CL:0002321,7.68e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.16e-24!75;UBERON:0001016!1.16e-24!75;UBERON:0001017!3.61e-24!73;UBERON:0005743!3.61e-24!73;UBERON:0004121!6.85e-23!102;UBERON:0000924!6.85e-23!102;UBERON:0006601!6.85e-23!102;UBERON:0002346!4.71e-19!71;UBERON:0003075!4.71e-19!71;UBERON:0007284!4.71e-19!71;UBERON:0000033!2.11e-15!63;UBERON:0001049!4.41e-15!52;UBERON:0005068!4.41e-15!52;UBERON:0006241!4.41e-15!52;UBERON:0007135!4.41e-15!52;UBERON:0002020!1.18e-14!34;UBERON:0003056!4.66e-14!49;UBERON:0000955!2.06e-12!50;UBERON:0006238!2.06e-12!50;UBERON:0002616!6.59e-12!49;UBERON:0002791!8.06e-12!29;UBERON:0003528!8.06e-12!29;UBERON:0001893!8.06e-12!29;UBERON:0003080!6.67e-11!40;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0000956!4.40e-10!21;UBERON:0001869!4.40e-10!21;UBERON:0000203!4.40e-10!21;UBERON:0002619!2.03e-08!17;UBERON:0000468!6.19e-08!333;UBERON:0000010!2.22e-07!11;UBERON:0002410!2.81e-07!9;UBERON:0000025!9.38e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.06e-31,75;UBERON:0001017,2.09e-31,73;UBERON:0004121,7.11e-31,95;UBERON:0000924,7.11e-31,95;UBERON:0006601,7.11e-31,95;UBERON:0002346,4.01e-27,64;UBERON:0003075,4.01e-27,64;UBERON:0007284,4.01e-27,64;UBERON:0010371,5.83e-24,73;UBERON:0010314,3.37e-20,92;UBERON:0001049,1.22e-19,52;UBERON:0005068,1.22e-19,52;UBERON:0006241,1.22e-19,52;UBERON:0007135,1.22e-19,52;UBERON:0000073,2.40e-19,54;UBERON:0002020,1.25e-18,34;UBERON:0003056,2.69e-18,49;UBERON:0000955,2.89e-16,47;UBERON:0006238,2.89e-16,47;UBERON:0002616,1.36e-15,46;UBERON:0003528,6.21e-15,29;UBERON:0002791,6.21e-15,29;UBERON:0001893,6.21e-15,29;UBERON:0003080,8.52e-14,40;UBERON:0002780,2.38e-13,39;UBERON:0001890,2.38e-13,39;UBERON:0006240,2.38e-13,39;UBERON:0000956,1.14e-12,21;UBERON:0001869,1.14e-12,21;UBERON:0000203,1.14e-12,21;UBERON:0002619,1.67e-10,17;UBERON:0002410,5.11e-09,9;UBERON:0000010,2.12e-08,11|phase1_expression=11.5307169915452,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,6.97680500417429,7.24964403023757,3.69416808241138,4.05960622713551,4.31257693094915,0.167782606057736,0,0,0.771778308107841,2.29226751951005,1.03134418455488,2.22548106945558,1.05798195854407,0.633831403506179,0.677689064138264,0,1.3498495759221,2.96659908770092,2.1314403448383,1.19840044207362,3.07374644257244,4.87341177849845,4.45519596494579,2.10324961351382,5.99867067247988,5.52171352379034,5.63457676388789,3.25874601462004,1.83843757322004,0,2.17068474744819,2.30409799884365,1.18697658957174,1.46380229763855,1.04182674111352,2.51264699101243,2.8138130501584,2.29197371665215,7.95497180778903,9.25415925194169,3.16879057903011,0.681535739998656,4.53429360640713,0.289864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.511290967734173,0,0.70667914902068,32.9573602277432,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,1.56136794089522,0.913396434936424,0.461230994512117,0.904335843315735,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,0.808834249737046,0.441683036920787,0,0,1.46390398505774,2.51336048176146,0,0,0,0,2.39665023047716,1.37250180845588,3.5183218591602,2.60736480288415,0.767146371990992,4.57133698031032,3.89379031362618,0.305518091550949,1.24406970610093,0,0,1.56144531555244,4.82794419310293,5.58192602396583,13.1113191517072,20.2748767470957,24.4697205744063,19.3962569838639,1.29351685369508,0,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0.284163499395593,0.828503090142008,0,0.36012412292203,0.473489471170421,1.57411385397923,1.07986979021165,1.39520366850245,0.804820204198858,0.817357396570186,1.15191894939436,0.985004784474571,0.243206428637567,0.438599962275997,2.19550115291051,0.536825675041487,2.94405927989778,4.6307075570678,0,0,3.41261200856374,3.71578674976702,1.9330119198314,1.4117846723634,0.444756087689741,1.14135375667535,0.474529061544512,0.164698954724011,1.50801125280162,0.198956472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| ||
|EntrezGene=12140 | |||
|HGNC= | |||
|MCL_coexpression_id=1027 | |||
|UniProt=P51880 | |||
|association_with_transcript=0bp_to_ENSMUST00000020024_5end | |||
|description=CAGE_peak_2_at_Fabp7_5end | |||
|id=chr10:57504665..57504709,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.32e-17!44;CL:0000133!7.32e-17!44;CL:0002319!3.78e-16!43;CL:0000055!9.57e-14!50;CL:0000540!1.44e-13!33;CL:0000047!1.44e-13!33;CL:0000031!1.44e-13!33;CL:0000404!1.44e-13!33;CL:0000393!4.48e-11!39;CL:0000211!4.48e-11!39;CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23;CL:0000107!2.81e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.82e-21,44;CL:0000133,3.82e-21,44;CL:0002319,3.22e-20,43;CL:0000540,4.73e-17,33;CL:0000047,4.73e-17,33;CL:0000031,4.73e-17,33;CL:0000404,4.73e-17,33;CL:0000393,2.52e-14,39;CL:0000211,2.52e-14,39;CL:0000117,4.30e-09,23;CL:0000337,4.30e-09,23;CL:0000107,5.11e-09,9;CL:0002321,7.68e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.16e-24!75;UBERON:0001016!1.16e-24!75;UBERON:0001017!3.61e-24!73;UBERON:0005743!3.61e-24!73;UBERON:0004121!6.85e-23!102;UBERON:0000924!6.85e-23!102;UBERON:0006601!6.85e-23!102;UBERON:0002346!4.71e-19!71;UBERON:0003075!4.71e-19!71;UBERON:0007284!4.71e-19!71;UBERON:0000033!2.11e-15!63;UBERON:0001049!4.41e-15!52;UBERON:0005068!4.41e-15!52;UBERON:0006241!4.41e-15!52;UBERON:0007135!4.41e-15!52;UBERON:0002020!1.18e-14!34;UBERON:0003056!4.66e-14!49;UBERON:0000955!2.06e-12!50;UBERON:0006238!2.06e-12!50;UBERON:0002616!6.59e-12!49;UBERON:0002791!8.06e-12!29;UBERON:0003528!8.06e-12!29;UBERON:0001893!8.06e-12!29;UBERON:0003080!6.67e-11!40;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0000956!4.40e-10!21;UBERON:0001869!4.40e-10!21;UBERON:0000203!4.40e-10!21;UBERON:0002619!2.03e-08!17;UBERON:0000468!6.19e-08!333;UBERON:0000010!2.22e-07!11;UBERON:0002410!2.81e-07!9;UBERON:0000025!9.38e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.06e-31,75;UBERON:0001017,2.09e-31,73;UBERON:0004121,7.11e-31,95;UBERON:0000924,7.11e-31,95;UBERON:0006601,7.11e-31,95;UBERON:0002346,4.01e-27,64;UBERON:0003075,4.01e-27,64;UBERON:0007284,4.01e-27,64;UBERON:0010371,5.83e-24,73;UBERON:0010314,3.37e-20,92;UBERON:0001049,1.22e-19,52;UBERON:0005068,1.22e-19,52;UBERON:0006241,1.22e-19,52;UBERON:0007135,1.22e-19,52;UBERON:0000073,2.40e-19,54;UBERON:0002020,1.25e-18,34;UBERON:0003056,2.69e-18,49;UBERON:0000955,2.89e-16,47;UBERON:0006238,2.89e-16,47;UBERON:0002616,1.36e-15,46;UBERON:0003528,6.21e-15,29;UBERON:0002791,6.21e-15,29;UBERON:0001893,6.21e-15,29;UBERON:0003080,8.52e-14,40;UBERON:0002780,2.38e-13,39;UBERON:0001890,2.38e-13,39;UBERON:0006240,2.38e-13,39;UBERON:0000956,1.14e-12,21;UBERON:0001869,1.14e-12,21;UBERON:0000203,1.14e-12,21;UBERON:0002619,1.67e-10,17;UBERON:0002410,5.11e-09,9;UBERON:0000010,2.12e-08,11 | |||
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|short_description=p2@Fabp7 | |||
}} |
Revision as of 16:55, 12 September 2013
Short description: | p2@Fabp7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fabp7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1027 |
Association with transcript: | 0bp_to_ENSMUST00000020024_5end |
EntrezGene: | Fabp7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.82e-21 | 44 |
neurectodermal cell | 3.82e-21 | 44 |
neural cell | 3.22e-20 | 43 |
neuron | 4.73e-17 | 33 |
neuronal stem cell | 4.73e-17 | 33 |
neuroblast | 4.73e-17 | 33 |
electrically signaling cell | 4.73e-17 | 33 |
electrically responsive cell | 2.52e-14 | 39 |
electrically active cell | 2.52e-14 | 39 |
CNS neuron (sensu Vertebrata) | 4.30e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-09 | 23 |
autonomic neuron | 5.11e-09 | 9 |
embryonic cell | 7.68e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.06e-31 | 75 |
central nervous system | 2.09e-31 | 73 |
ectoderm-derived structure | 7.11e-31 | 95 |
ectoderm | 7.11e-31 | 95 |
presumptive ectoderm | 7.11e-31 | 95 |
neurectoderm | 4.01e-27 | 64 |
neural plate | 4.01e-27 | 64 |
presumptive neural plate | 4.01e-27 | 64 |
ecto-epithelium | 5.83e-24 | 73 |
structure with developmental contribution from neural crest | 3.37e-20 | 92 |
neural tube | 1.22e-19 | 52 |
neural rod | 1.22e-19 | 52 |
future spinal cord | 1.22e-19 | 52 |
neural keel | 1.22e-19 | 52 |
regional part of nervous system | 2.40e-19 | 54 |
gray matter | 1.25e-18 | 34 |
pre-chordal neural plate | 2.69e-18 | 49 |
brain | 2.89e-16 | 47 |
future brain | 2.89e-16 | 47 |
regional part of brain | 1.36e-15 | 46 |
brain grey matter | 6.21e-15 | 29 |
regional part of telencephalon | 6.21e-15 | 29 |
telencephalon | 6.21e-15 | 29 |
anterior neural tube | 8.52e-14 | 40 |
regional part of forebrain | 2.38e-13 | 39 |
forebrain | 2.38e-13 | 39 |
future forebrain | 2.38e-13 | 39 |
cerebral cortex | 1.14e-12 | 21 |
cerebral hemisphere | 1.14e-12 | 21 |
pallium | 1.14e-12 | 21 |
regional part of cerebral cortex | 1.67e-10 | 17 |
autonomic nervous system | 5.11e-09 | 9 |
peripheral nervous system | 2.12e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.