FFCP PHASE1:Mm9::chr2:32702792..32702808,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20910|HGNC=|MCL_coexpression_id=13|UniProt=O08599|association_with_transcript=-33bp_to_ENSMUST00000050000_5end|description=CAGE_peak_3_at_Stxbp1_5end|id=chr2:32702792..32702808,-|ontology_enrichment_celltype=CL:0000540!3.36e-14!33;CL:0000047!3.36e-14!33;CL:0000031!3.36e-14!33;CL:0000404!3.36e-14!33;CL:0002319!1.86e-13!43;CL:0000117!2.73e-13!23;CL:0000337!2.73e-13!23;CL:0000221!1.25e-12!44;CL:0000133!1.25e-12!44;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39;CL:0000055!3.59e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.59e-14,33;CL:0000047,2.59e-14,33;CL:0000031,2.59e-14,33;CL:0000404,2.59e-14,33;CL:0002319,1.45e-13,43;CL:0000117,2.14e-13,23;CL:0000337,2.14e-13,23;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39;CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.56e-30!73;UBERON:0005743!4.56e-30!73;UBERON:0000073!6.07e-30!75;UBERON:0001016!6.07e-30!75;UBERON:0002346!4.97e-25!71;UBERON:0003075!4.97e-25!71;UBERON:0007284!4.97e-25!71;UBERON:0004121!7.32e-25!102;UBERON:0000924!7.32e-25!102;UBERON:0006601!7.32e-25!102;UBERON:0001049!1.74e-24!52;UBERON:0005068!1.74e-24!52;UBERON:0006241!1.74e-24!52;UBERON:0007135!1.74e-24!52;UBERON:0000955!8.57e-24!50;UBERON:0006238!8.57e-24!50;UBERON:0000033!1.00e-23!63;UBERON:0002616!3.79e-23!49;UBERON:0003056!2.57e-21!49;UBERON:0002020!2.25e-19!34;UBERON:0003080!3.92e-19!40;UBERON:0002780!1.67e-18!39;UBERON:0001890!1.67e-18!39;UBERON:0006240!1.67e-18!39;UBERON:0002791!5.40e-17!29;UBERON:0003528!5.40e-17!29;UBERON:0001893!5.40e-17!29;UBERON:0000956!1.36e-12!21;UBERON:0001869!1.36e-12!21;UBERON:0000203!1.36e-12!21;UBERON:0000025!2.61e-12!114;UBERON:0007811!1.36e-11!86;UBERON:0000153!3.04e-11!94;UBERON:0004111!7.23e-11!122;UBERON:0002619!2.90e-10!17;UBERON:0002021!4.53e-08!10;UBERON:0000411!4.53e-08!10;UBERON:0001950!4.53e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.52e-30,73;UBERON:0001016,3.36e-30,75;UBERON:0002346,1.69e-27,64;UBERON:0003075,1.69e-27,64;UBERON:0007284,1.69e-27,64;UBERON:0004121,5.39e-26,95;UBERON:0000924,5.39e-26,95;UBERON:0006601,5.39e-26,95;UBERON:0000073,5.45e-26,54;UBERON:0001049,1.08e-24,52;UBERON:0005068,1.08e-24,52;UBERON:0006241,1.08e-24,52;UBERON:0007135,1.08e-24,52;UBERON:0010314,5.19e-23,92;UBERON:0000955,4.03e-22,47;UBERON:0006238,4.03e-22,47;UBERON:0003056,1.70e-21,49;UBERON:0002616,1.76e-21,46;UBERON:0010371,2.15e-20,73;UBERON:0002020,1.55e-19,34;UBERON:0003080,2.72e-19,40;UBERON:0002780,1.17e-18,39;UBERON:0001890,1.17e-18,39;UBERON:0006240,1.17e-18,39;UBERON:0003528,3.92e-17,29;UBERON:0002791,3.92e-17,29;UBERON:0001893,3.92e-17,29;UBERON:0000956,1.08e-12,21;UBERON:0001869,1.08e-12,21;UBERON:0000203,1.08e-12,21;UBERON:0000025,2.94e-12,114;UBERON:0004111,1.15e-10,122;UBERON:0002619,2.42e-10,17;UBERON:0002021,3.96e-08,10;UBERON:0000411,3.96e-08,10;UBERON:0001950,3.96e-08,10|phase1_expression=1.76163731815273,0,0,0,0,0.839396359559449,1.16806320297763,0.258246646883153,0.140788722151667,0.234064526321993,0.34243593645101,0.0797721589953364,0.171200729931206,0.437102012094987,1.66554880907831,1.21485160433896,0.699561878128147,0.946386496074713,0.959801035240171,1.69755860719212,4.67738095830884,2.38298282882125,1.30599894569468,0.319984845586813,0,0,0.430761996159075,1.07735616342945,0,0.252030129759931,0.221730510655305,3.81018404075779,6.1506478758457,0,0,0,0.408338712524738,0,0,0,0,0,0,1.38486499773135,2.02753862439029,2.20256102594018,5.47673941043627,2.39827672018491,2.85592037554813,2.91644848611425,2.37976916763116,2.87505128729943,0.503347818173209,0.725362142011344,0,2.82985379639542,2.57880095944881,3.6097046459421,17.601532094785,21.6886301501533,19.6487735086916,4.06613438482959,0.889294796111139,0.899899717281399,1.97773272513395,2.1314403448383,3.89480143673926,2.30530983192933,21.3600601355464,24.0310570230409,19.5602214056785,15.996455126613,15.6816664075646,20.0884910712525,26.1658135879785,20.2228133054205,29.731287869835,17.7485399938411,17.9719643909805,25.0583946687368,21.8655468209759,19.7947080811569,17.0301629390842,11.2552522006336,15.1270265299042,13.258286346315,10.5355043791336,16.0303523409758,2.57469057332826,3.47629176491213,3.47837386442013,2.58127163094416,0,0.539703191637817,1.94932925234301,0,1.12355536105401,1.02258193546835,1.55871602761721,1.7666978725517,0.704217098883403,1.28326477414318,2.54805239706646,28.4426681261332,0.216491041011214,0.506719730950197,0,0.5709193985953,2.84831672011889,2.3750742250372,3.46970653532272,3.04465478312141,1.84492397804847,1.50722640552623,2.11659672844269,1.75933227861546,3.21353458054686,1.44599356919912,0.884610551949874,2.91180329905337,2.42925670306433,2.42437626567611,0,10.8328894894272,12.9856958224342,0.766371165625774,0.599075622529601,0,1.14363204365758,21.7196427136993,23.7900313465686,20.8586224507355,24.509229147111,26.338692105024,13.9217989854905,16.8730913590468,1.62942982160506,1.49288364732112,1.26361379216837,5.47148825304832,3.3831315170303,2.75882525320168,3.96136685571768,4.9732589885786,5.03470093719826,5.25266253167884,4.59138450342671,8.79591460512653,1.94011193639558,2.64748512234947,3.16712023495108,2.19195732427575,2.22437799380478,2.089512999133,2.88094990971121,1.79130840136644,1.40442637462647,0.257347907114715,0.852490498186778,3.72826390563903,3.28336483973535,3.06105504483725,3.31442629819294,4.72234156193769,3.5481435964097,3.0229412817553,4.56064782379353,3.73649095574942,3.78487654801005,2.79084688934462,2.51313309592153,1.90059983652932,1.75640092232841,1.20785776884335,20.3981250107203,19.3460671273055,0.330418782983798,0.793351699990633,5.11891801284562,3.71578674976702,1.28867461322093,1.61346819698674,1.11189021922435,2.66315876557583,0,1.31759163779209,1.25667604400135,1.59165177632921,1.36474860983384,0,0.648414149624083,0.398282546508734,1.70701110857774,2.28497025219458,2.25415471346161,3.05476991767971,2.90928730751439,1.96380295692892,2.78240763346732,1.77132177575523,1.8839847340965,1.35736880313981,0.592905254174298,1.50160595144485,0.786235980452812,0.674586337154561,1.01430060694251,1.4470629585145,1.52775511068852,1.15078454980324,0.648540907100142,0.549122826376163,1.43768206527355,2.60498663367952,1.24815069245824,1.26289438973556,0.717589654087649,0.482443521363367,3.51031061316549,2.4633883530163,2.77040459951444,4.41337223015489,2.81628297946203,2.68010011906905,4.76087281772027,4.48807390072937,4.09851374676097,3.76489972402917,4.78364305972461,3.4411296090305,2.59027472798843,3.32692834737477,0,2.71952841909355,0.983528546038072,0.275936746304732,21.1926778783885,18.1678114217915,2.62295912602681,0.757412781613119,3.78609863299508,3.12350995437311,4.09304455692318,5.73525115086125,2.67358408898873,6.51076020814315,4.04810701674894,5.26060544240361,5.92931666919785,21.5285282002611,2.55492153374884,2.49291845134157,1.46598263418218,2.8044920905331,1.32745138339963,0.971122544619926,1.209294227859,0.943025398779491,2.36241514304618,2.45948118355142,1.29214146584111,2.90826983582004,2.85197902707777,1.8962205476149,5.27093042874994,2.06271086496374,5.10659408630682,3.6012218806262,3.36332577835162,2.14337035031592,4.61084607469911,4.10248280484762,3.62007845324666,4.87143918583359,2.81606049676452,1.27099242518292,3.30792597082443,1.81374878235628,1.93757312035087,1.02531972377865,0.358117032009409,1.14898629821543,1.45740418314925,20.025932617135,1.70870880797853,2.27025554759545,3.88908507476395,0.565105371014073,1.36694227721025,2.74533807847827,1.18984900995699,0.69975726161829,1.24379976423981,0.954670618015114,3.47969592939249,3.04979200690273,1.51207477150522,2.92723614420256,2.40198820120795,1.34864346384821,1.81837602595739,1.83229159388821,0.648074866458964,3.72803587852155,0.56369293868419,2.39226473670366,2.15096037594227,2.72231663681667,2.45403664607689,1.01373675294467,1.99507305697782,2.3436789271911,3.56521771047417,1.93267296660805,1.72818003754719,1.89606672376907,2.22997736819181,1.74608627180206,1.81889152168913,2.14832034800978,1.39076948346885,1.08175904567972,1.03382669022204,1.00966449948148,0.609654453239999,0.604957110821043,1.07203668813728,0.865906574762965,0.935015217452552,0.906921534460845,2.88581739386284,1.16628013592318,1.00730769818447,1.73870634628971,1.31377732815827,1.83151624267265,1.71494703263253,1.00314420807073,38.9678771405776,41.4292712856459,25.2074025913335,31.4491323688948,22.6077231524312,33.2373314851468,33.0761025113585,33.3237690385923,29.0011141749891,24.3347346523355,3.63255716544618,5.1873233542134,4.78054096111576,4.132814190161,5.65955539095552,4.22840069435032,4.00044110042907,5.97501665992793,6.09746498224449,3.53776096469316,5.83002389747551,2.64076877940507,4.02658482120494,4.09760975391163,4.47996657853783,3.81034953026459,4.75125736373908,3.8581844092741,4.12085900803307,4.12156976376312,4.4573002810104,3.01708870470874,2.14592570952589,4.79643174886684,3.3879376949519,5.16149108139227,4.20734337607377,3.94604567156764,4.20992752922171,5.05028044491965,4.62676570684279,4.53120618927592,1.63692417267876,3.87342102964915,2.50778594275484,10.9916654292696,4.44470056046276,3.22306581072447,2.29545998482612,1.32354851471709,1.15933917810211|short_description=p3@Stxbp1}} | ||
|EntrezGene=20910 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=O08599 | |||
|association_with_transcript=-33bp_to_ENSMUST00000050000_5end | |||
|description=CAGE_peak_3_at_Stxbp1_5end | |||
|id=chr2:32702792..32702808,- | |||
|ontology_enrichment_celltype=CL:0000540!3.36e-14!33;CL:0000047!3.36e-14!33;CL:0000031!3.36e-14!33;CL:0000404!3.36e-14!33;CL:0002319!1.86e-13!43;CL:0000117!2.73e-13!23;CL:0000337!2.73e-13!23;CL:0000221!1.25e-12!44;CL:0000133!1.25e-12!44;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39;CL:0000055!3.59e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.59e-14,33;CL:0000047,2.59e-14,33;CL:0000031,2.59e-14,33;CL:0000404,2.59e-14,33;CL:0002319,1.45e-13,43;CL:0000117,2.14e-13,23;CL:0000337,2.14e-13,23;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39;CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.56e-30!73;UBERON:0005743!4.56e-30!73;UBERON:0000073!6.07e-30!75;UBERON:0001016!6.07e-30!75;UBERON:0002346!4.97e-25!71;UBERON:0003075!4.97e-25!71;UBERON:0007284!4.97e-25!71;UBERON:0004121!7.32e-25!102;UBERON:0000924!7.32e-25!102;UBERON:0006601!7.32e-25!102;UBERON:0001049!1.74e-24!52;UBERON:0005068!1.74e-24!52;UBERON:0006241!1.74e-24!52;UBERON:0007135!1.74e-24!52;UBERON:0000955!8.57e-24!50;UBERON:0006238!8.57e-24!50;UBERON:0000033!1.00e-23!63;UBERON:0002616!3.79e-23!49;UBERON:0003056!2.57e-21!49;UBERON:0002020!2.25e-19!34;UBERON:0003080!3.92e-19!40;UBERON:0002780!1.67e-18!39;UBERON:0001890!1.67e-18!39;UBERON:0006240!1.67e-18!39;UBERON:0002791!5.40e-17!29;UBERON:0003528!5.40e-17!29;UBERON:0001893!5.40e-17!29;UBERON:0000956!1.36e-12!21;UBERON:0001869!1.36e-12!21;UBERON:0000203!1.36e-12!21;UBERON:0000025!2.61e-12!114;UBERON:0007811!1.36e-11!86;UBERON:0000153!3.04e-11!94;UBERON:0004111!7.23e-11!122;UBERON:0002619!2.90e-10!17;UBERON:0002021!4.53e-08!10;UBERON:0000411!4.53e-08!10;UBERON:0001950!4.53e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.52e-30,73;UBERON:0001016,3.36e-30,75;UBERON:0002346,1.69e-27,64;UBERON:0003075,1.69e-27,64;UBERON:0007284,1.69e-27,64;UBERON:0004121,5.39e-26,95;UBERON:0000924,5.39e-26,95;UBERON:0006601,5.39e-26,95;UBERON:0000073,5.45e-26,54;UBERON:0001049,1.08e-24,52;UBERON:0005068,1.08e-24,52;UBERON:0006241,1.08e-24,52;UBERON:0007135,1.08e-24,52;UBERON:0010314,5.19e-23,92;UBERON:0000955,4.03e-22,47;UBERON:0006238,4.03e-22,47;UBERON:0003056,1.70e-21,49;UBERON:0002616,1.76e-21,46;UBERON:0010371,2.15e-20,73;UBERON:0002020,1.55e-19,34;UBERON:0003080,2.72e-19,40;UBERON:0002780,1.17e-18,39;UBERON:0001890,1.17e-18,39;UBERON:0006240,1.17e-18,39;UBERON:0003528,3.92e-17,29;UBERON:0002791,3.92e-17,29;UBERON:0001893,3.92e-17,29;UBERON:0000956,1.08e-12,21;UBERON:0001869,1.08e-12,21;UBERON:0000203,1.08e-12,21;UBERON:0000025,2.94e-12,114;UBERON:0004111,1.15e-10,122;UBERON:0002619,2.42e-10,17;UBERON:0002021,3.96e-08,10;UBERON:0000411,3.96e-08,10;UBERON:0001950,3.96e-08,10 | |||
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| |||
|short_description=p3@Stxbp1 | |||
}} |
Revision as of 23:50, 13 September 2013
Short description: | p3@Stxbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Stxbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -33bp_to_ENSMUST00000050000_5end |
EntrezGene: | Stxbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.59e-14 | 33 |
neuronal stem cell | 2.59e-14 | 33 |
neuroblast | 2.59e-14 | 33 |
electrically signaling cell | 2.59e-14 | 33 |
neural cell | 1.45e-13 | 43 |
CNS neuron (sensu Vertebrata) | 2.14e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-13 | 23 |
electrically responsive cell | 1.17e-12 | 39 |
electrically active cell | 1.17e-12 | 39 |
ectodermal cell | 1.22e-12 | 44 |
neurectodermal cell | 1.22e-12 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.