FFCP PHASE1:Mm9::chr2:101660614..101660617,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=218|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:101660614..101660617,-|id=chr2:101660614..101660617,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.37e-23,2;UBERON:0002298,2.37e-23,2;UBERON:0005290,2.37e-23,2;UBERON:0010096,2.37e-23,2;UBERON:0004733,3.20e-17,6;UBERON:0004732,3.20e-17,6;UBERON:0002028,3.20e-17,6;UBERON:0007277,3.20e-17,6;UBERON:0003076,3.30e-15,12;UBERON:0003057,3.30e-15,12;UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1;UBERON:0001049,1.19e-07,52;UBERON:0005068,1.19e-07,52;UBERON:0006241,1.19e-07,52;UBERON:0007135,1.19e-07,52|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0.255715457330331,1.0389402227978,0.486723789203273,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0.340182495756639,0.896796041993948,0.468508622798644,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,1.05144974282064,0,0,0.264450566663544,0.213288250535234,0,0,0.80673409849337,1.33426826306922,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,2.56880943980467,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0,0,0.582961673259701,2.22510362412612,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr2:101660614..101660617,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:101660614..101660617,- | |||
|id=chr2:101660614..101660617,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.37e-23,2;UBERON:0002298,2.37e-23,2;UBERON:0005290,2.37e-23,2;UBERON:0010096,2.37e-23,2;UBERON:0004733,3.20e-17,6;UBERON:0004732,3.20e-17,6;UBERON:0002028,3.20e-17,6;UBERON:0007277,3.20e-17,6;UBERON:0003076,3.30e-15,12;UBERON:0003057,3.30e-15,12;UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1;UBERON:0001049,1.19e-07,52;UBERON:0005068,1.19e-07,52;UBERON:0006241,1.19e-07,52;UBERON:0007135,1.19e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0.255715457330331,1.0389402227978,0.486723789203273,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0.340182495756639,0.896796041993948,0.468508622798644,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,1.05144974282064,0,0,0.264450566663544,0.213288250535234,0,0,0.80673409849337,1.33426826306922,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,2.56880943980467,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0,0,0.582961673259701,2.22510362412612,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr2:101660614..101660617,- | |||
}} |
Revision as of 21:25, 13 September 2013
Short description: | p@chr2:101660614..101660617, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:101660614..101660617, - |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.34e-12 | 1 |
meso-epithelial cell | 3.34e-12 | 1 |
endothelial cell | 3.34e-12 | 1 |
endothelial cell of sinusoid | 3.34e-12 | 1 |
endothelial cell of hepatic sinusoid | 3.34e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.37e-23 | 2 |
brainstem | 2.37e-23 | 2 |
myelencephalon | 2.37e-23 | 2 |
future myelencephalon | 2.37e-23 | 2 |
segmental subdivision of hindbrain | 3.20e-17 | 6 |
segmental subdivision of nervous system | 3.20e-17 | 6 |
hindbrain | 3.20e-17 | 6 |
presumptive hindbrain | 3.20e-17 | 6 |
posterior neural tube | 3.30e-15 | 12 |
chordal neural plate | 3.30e-15 | 12 |
bile duct | 3.34e-12 | 1 |
hepatic sinusoid | 3.34e-12 | 1 |
parenchyma | 3.34e-12 | 1 |
abdomen blood vessel | 3.34e-12 | 1 |
sinusoid | 3.34e-12 | 1 |
digestive system duct | 3.34e-12 | 1 |
abdominal segment blood vessel | 3.34e-12 | 1 |
trunk blood vessel | 3.34e-12 | 1 |
liver parenchyma | 3.34e-12 | 1 |
liver lobule | 3.34e-12 | 1 |
biliary system | 3.34e-12 | 1 |
biliary tree | 3.34e-12 | 1 |
biliary bud | 3.34e-12 | 1 |
hepatic duct | 3.34e-12 | 1 |
neural tube | 1.19e-07 | 52 |
neural rod | 1.19e-07 | 52 |
future spinal cord | 1.19e-07 | 52 |
neural keel | 1.19e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.