FFCP PHASE1:Mm9::chr4:94487460..94487476,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=264|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:94487460..94487476,+|id=chr4:94487460..94487476,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!7.47e-12!66;UBERON:0004872!8.32e-08!33;UBERON:0002048!1.02e-07!14;UBERON:0000117!1.02e-07!14;UBERON:0000171!1.02e-07!14;UBERON:0000170!1.02e-07!14;UBERON:0005597!1.02e-07!14;UBERON:0000118!1.02e-07!14;UBERON:0005172!1.59e-07!49;UBERON:0005173!1.59e-07!49;UBERON:0002417!1.59e-07!49;UBERON:0000916!1.59e-07!49;UBERON:0007100!2.06e-07!18;UBERON:0000948!2.06e-07!18;UBERON:0005498!2.06e-07!18;UBERON:0004140!2.06e-07!18;UBERON:0009881!2.06e-07!18;UBERON:0004141!2.06e-07!18;UBERON:0003084!2.06e-07!18;UBERON:0007005!2.06e-07!18;UBERON:0004139!2.06e-07!18;UBERON:0004291!2.06e-07!18;UBERON:0005177!2.52e-07!85;UBERON:0000926!3.06e-07!193;UBERON:0004120!3.06e-07!193;UBERON:0006603!3.06e-07!193;UBERON:0001048!4.88e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.61e-18,14;UBERON:0000117,4.61e-18,14;UBERON:0000171,4.61e-18,14;UBERON:0000170,4.61e-18,14;UBERON:0005597,4.61e-18,14;UBERON:0000118,4.61e-18,14;UBERON:0005153,2.03e-14,17;UBERON:0005178,2.03e-14,17;UBERON:0005181,2.03e-14,17;UBERON:0002224,2.03e-14,17;UBERON:0000915,2.03e-14,17;UBERON:0008947,2.03e-14,17;UBERON:0003258,2.03e-14,17;UBERON:0009569,2.66e-12,66;UBERON:0005157,7.11e-12,20;UBERON:0003103,1.74e-10,43;UBERON:0007100,2.18e-10,18;UBERON:0000948,2.18e-10,18;UBERON:0005498,2.18e-10,18;UBERON:0004140,2.18e-10,18;UBERON:0009881,2.18e-10,18;UBERON:0004141,2.18e-10,18;UBERON:0003084,2.18e-10,18;UBERON:0007005,2.18e-10,18;UBERON:0004139,2.18e-10,18;UBERON:0004291,2.18e-10,18;UBERON:0004535,2.22e-09,23;UBERON:0001009,2.22e-09,23;UBERON:0005177,2.32e-09,79;UBERON:0001048,1.23e-08,134;UBERON:0002100,1.49e-07,90;UBERON:0000025,3.06e-07,114;UBERON:0004872,5.58e-07,33|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,2.4693628498498,0.125666591329675,0,0.144599356919912,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0.767146371990992,0.20778804455956,0,0.611036183101898,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,1.65775299619287,0.680364991513279,0.384341160854549,0.281105173679186,1.55222022443409,0,0.189106080167819,0.175951124163949,0,0.834141747676794,1.0447564995665,0,0.199034266818493,0,0,0,0.621377317606506,4.92504725960302,2.34080679899319,0.710234206755631,1.57411385397923,2.46827380619805,1.62773761325285,1.3413670069981,2.6856028744449,0.822799249567402,5.91002870684743,2.02672023864639,0.438599962275997,1.3173006917463,0.939444931322602,0,0,0,0,0.426576501070468,1.16118335930219,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.864552199498777,0,0,1.02823661348756,0,1.22190796707189,2.32742984601151,2.59502533594179,1.58091342810643,2.50937251565324,1.255989822731,0.370191491765402,0,0,0.393117990226406,0,0,0.241177159752417,0,0.287696137450811,0.810676133875177,0.549122826376163,12.9391385874619,1.48856379067401,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,3.14080423283228,0,0.977789858652155,1.35796068620151,1.64283173801951,1.00503754465089,0,5.26860849216057,3.94087860265477,8.19419351700467,5.89982644032702,10.9788420859544,7.08008425650172,4.77341893318988,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0.713475270408282,0.164549020602121,0,0.704015124191131,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0,0.170870880797853,0.619160603889667,1.29636169158798,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.436725127492355,0.674321731924103,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0,0.168956125490778,1.40828686374905,1.0416350787516,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,2.25900737046827,0.460325236507177,1.7186865403181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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=264 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:94487460..94487476,+ | |||
|id=chr4:94487460..94487476,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!7.47e-12!66;UBERON:0004872!8.32e-08!33;UBERON:0002048!1.02e-07!14;UBERON:0000117!1.02e-07!14;UBERON:0000171!1.02e-07!14;UBERON:0000170!1.02e-07!14;UBERON:0005597!1.02e-07!14;UBERON:0000118!1.02e-07!14;UBERON:0005172!1.59e-07!49;UBERON:0005173!1.59e-07!49;UBERON:0002417!1.59e-07!49;UBERON:0000916!1.59e-07!49;UBERON:0007100!2.06e-07!18;UBERON:0000948!2.06e-07!18;UBERON:0005498!2.06e-07!18;UBERON:0004140!2.06e-07!18;UBERON:0009881!2.06e-07!18;UBERON:0004141!2.06e-07!18;UBERON:0003084!2.06e-07!18;UBERON:0007005!2.06e-07!18;UBERON:0004139!2.06e-07!18;UBERON:0004291!2.06e-07!18;UBERON:0005177!2.52e-07!85;UBERON:0000926!3.06e-07!193;UBERON:0004120!3.06e-07!193;UBERON:0006603!3.06e-07!193;UBERON:0001048!4.88e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.61e-18,14;UBERON:0000117,4.61e-18,14;UBERON:0000171,4.61e-18,14;UBERON:0000170,4.61e-18,14;UBERON:0005597,4.61e-18,14;UBERON:0000118,4.61e-18,14;UBERON:0005153,2.03e-14,17;UBERON:0005178,2.03e-14,17;UBERON:0005181,2.03e-14,17;UBERON:0002224,2.03e-14,17;UBERON:0000915,2.03e-14,17;UBERON:0008947,2.03e-14,17;UBERON:0003258,2.03e-14,17;UBERON:0009569,2.66e-12,66;UBERON:0005157,7.11e-12,20;UBERON:0003103,1.74e-10,43;UBERON:0007100,2.18e-10,18;UBERON:0000948,2.18e-10,18;UBERON:0005498,2.18e-10,18;UBERON:0004140,2.18e-10,18;UBERON:0009881,2.18e-10,18;UBERON:0004141,2.18e-10,18;UBERON:0003084,2.18e-10,18;UBERON:0007005,2.18e-10,18;UBERON:0004139,2.18e-10,18;UBERON:0004291,2.18e-10,18;UBERON:0004535,2.22e-09,23;UBERON:0001009,2.22e-09,23;UBERON:0005177,2.32e-09,79;UBERON:0001048,1.23e-08,134;UBERON:0002100,1.49e-07,90;UBERON:0000025,3.06e-07,114;UBERON:0004872,5.58e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,2.4693628498498,0.125666591329675,0,0.144599356919912,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0.767146371990992,0.20778804455956,0,0.611036183101898,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,1.65775299619287,0.680364991513279,0.384341160854549,0.281105173679186,1.55222022443409,0,0.189106080167819,0.175951124163949,0,0.834141747676794,1.0447564995665,0,0.199034266818493,0,0,0,0.621377317606506,4.92504725960302,2.34080679899319,0.710234206755631,1.57411385397923,2.46827380619805,1.62773761325285,1.3413670069981,2.6856028744449,0.822799249567402,5.91002870684743,2.02672023864639,0.438599962275997,1.3173006917463,0.939444931322602,0,0,0,0,0.426576501070468,1.16118335930219,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.864552199498777,0,0,1.02823661348756,0,1.22190796707189,2.32742984601151,2.59502533594179,1.58091342810643,2.50937251565324,1.255989822731,0.370191491765402,0,0,0.393117990226406,0,0,0.241177159752417,0,0.287696137450811,0.810676133875177,0.549122826376163,12.9391385874619,1.48856379067401,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,3.14080423283228,0,0.977789858652155,1.35796068620151,1.64283173801951,1.00503754465089,0,5.26860849216057,3.94087860265477,8.19419351700467,5.89982644032702,10.9788420859544,7.08008425650172,4.77341893318988,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0.713475270408282,0.164549020602121,0,0.704015124191131,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0,0.170870880797853,0.619160603889667,1.29636169158798,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.436725127492355,0.674321731924103,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0,0.168956125490778,1.40828686374905,1.0416350787516,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,2.25900737046827,0.460325236507177,1.71868654031819,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.468207537349412,0.384150914429216,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.789209134313529,0.271608227691724,0,0.118635018124174,0.29551344712669,1.22769312950907,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr4:94487460..94487476,+ | |||
}} |
Revision as of 05:36, 14 September 2013
Short description: | p@chr4:94487460..94487476, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:94487460..94487476, + |
Coexpression cluster: | MCL_coexpression_mm9:264 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 4.61e-18 | 14 |
respiratory tube | 4.61e-18 | 14 |
respiration organ | 4.61e-18 | 14 |
pair of lungs | 4.61e-18 | 14 |
lung primordium | 4.61e-18 | 14 |
lung bud | 4.61e-18 | 14 |
epithelial bud | 2.03e-14 | 17 |
thoracic cavity element | 2.03e-14 | 17 |
thoracic segment organ | 2.03e-14 | 17 |
thoracic cavity | 2.03e-14 | 17 |
thoracic segment of trunk | 2.03e-14 | 17 |
respiratory primordium | 2.03e-14 | 17 |
endoderm of foregut | 2.03e-14 | 17 |
subdivision of trunk | 2.66e-12 | 66 |
epithelial fold | 7.11e-12 | 20 |
compound organ | 1.74e-10 | 43 |
primary circulatory organ | 2.18e-10 | 18 |
heart | 2.18e-10 | 18 |
primitive heart tube | 2.18e-10 | 18 |
primary heart field | 2.18e-10 | 18 |
anterior lateral plate mesoderm | 2.18e-10 | 18 |
heart tube | 2.18e-10 | 18 |
heart primordium | 2.18e-10 | 18 |
cardiac mesoderm | 2.18e-10 | 18 |
cardiogenic plate | 2.18e-10 | 18 |
heart rudiment | 2.18e-10 | 18 |
cardiovascular system | 2.22e-09 | 23 |
circulatory system | 2.22e-09 | 23 |
trunk region element | 2.32e-09 | 79 |
primordium | 1.23e-08 | 134 |
trunk | 1.49e-07 | 90 |
tube | 3.06e-07 | 114 |
splanchnic layer of lateral plate mesoderm | 5.58e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.