FFCP PHASE1:Mm9::chr16:36935118..36935136,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15163|HGNC=|MCL_coexpression_id=36|UniProt=P49710,Q8CA06|association_with_transcript=49bp_to_ENSMUST00000023531,NM_008225,uc007zdi.2_5end|description=CAGE_peak_2_at_Hcls1_5end|id=chr16:36935118..36935136,+|ontology_enrichment_celltype=CL:0000988!1.26e-10!32;CL:0002032!1.26e-10!32;CL:0000037!1.26e-10!32;CL:0000566!1.26e-10!32;CL:0000837!1.26e-10!32;CL:0002031!1.09e-08!25;CL:0000738!4.31e-08!17;CL:0002087!4.31e-08!17;CL:0000838!4.47e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,5.08e-17,32;CL:0002032,5.08e-17,32;CL:0000037,5.08e-17,32;CL:0000837,5.08e-17,32;CL:0002031,4.34e-14,25;CL:0002320,9.45e-12,46;CL:0000134,9.45e-12,46;CL:0000738,2.19e-11,17;CL:0002087,2.19e-11,17;CL:0000838,7.94e-10,12;CL:0000049,1.92e-09,19;CL:0000084,7.52e-09,11;CL:0000827,7.52e-09,11;CL:0000542,9.16e-09,13;CL:0000051,9.16e-09,13;CL:0000219,1.63e-08,54;CL:0000763,1.27e-07,16;CL:0000791,3.34e-07,9;CL:0000789,3.34e-07,9;CL:0002420,3.34e-07,9;CL:0002419,3.34e-07,9;CL:0000790,3.34e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.26e-20!48;UBERON:0002390!1.14e-18!45;UBERON:0003061!1.14e-18!45;UBERON:0002405!2.78e-17!70;UBERON:0004177!6.45e-11!29;UBERON:0003081!2.16e-10!88;UBERON:0005057!1.11e-08!51;UBERON:0002371!1.22e-08!16;UBERON:0001474!1.28e-08!22;UBERON:0004765!1.28e-08!22;UBERON:0001434!1.28e-08!22;UBERON:0003408!1.31e-08!24;UBERON:0002370!2.65e-08!23;UBERON:0000974!2.65e-08!23;UBERON:0004807!2.65e-08!23;UBERON:0005058!2.65e-08!23;UBERON:0003351!2.65e-08!23;UBERON:0009113!2.65e-08!23;UBERON:0003295!2.65e-08!23;UBERON:0009722!2.65e-08!23;UBERON:0005562!2.65e-08!23;UBERON:0007690!2.65e-08!23;UBERON:0006562!4.76e-08!24;UBERON:0001557!4.76e-08!24;UBERON:0001042!4.76e-08!24;UBERON:0008814!4.76e-08!24;UBERON:0009145!4.76e-08!24;UBERON:0002204!6.23e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.97e-32,48;UBERON:0002405,5.97e-32,48;UBERON:0002390,2.36e-29,45;UBERON:0003061,2.36e-29,45;UBERON:0004177,1.57e-17,29;UBERON:0005057,1.57e-17,29;UBERON:0000077,1.09e-14,35;UBERON:0003081,3.01e-14,87;UBERON:0003408,5.39e-14,24;UBERON:0002370,1.54e-13,23;UBERON:0000974,1.54e-13,23;UBERON:0004807,1.54e-13,23;UBERON:0005058,1.54e-13,23;UBERON:0003351,1.54e-13,23;UBERON:0009113,1.54e-13,23;UBERON:0003295,1.54e-13,23;UBERON:0009722,1.54e-13,23;UBERON:0005562,1.54e-13,23;UBERON:0007690,1.54e-13,23;UBERON:0006562,1.16e-12,24;UBERON:0001557,1.16e-12,24;UBERON:0001042,1.16e-12,24;UBERON:0008814,1.16e-12,24;UBERON:0009145,1.16e-12,24;UBERON:0001474,2.95e-12,22;UBERON:0004765,2.95e-12,22;UBERON:0001434,2.95e-12,22;UBERON:0002371,3.67e-12,16;UBERON:0002384,9.45e-12,46;UBERON:0002204,6.78e-11,32;UBERON:0001004,1.10e-10,42;UBERON:0000072,1.92e-10,27;UBERON:0000065,2.97e-10,41;UBERON:0000926,4.87e-10,120;UBERON:0004120,4.87e-10,120;UBERON:0006603,4.87e-10,120;UBERON:0001041,8.12e-10,80;UBERON:0007811,6.54e-07,36;UBERON:0005911,8.79e-07,69|phase1_expression=0.480446541314382,0,0,0,0,0,0,8.00564605337773,7.46180227403834,8.89445200023575,2.05461561870606,2.71225340584144,5.9920255475922,6.20684857174882,4.33042690360362,6.68168382386426,4.19737126876888,22.7132759057931,21.9383093769182,22.4926515452956,1.10556277196391,16.5815888505478,14.6271881917804,8.79958325363737,8.02932483735095,0,0,0,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,0,0,0,52.3164538421135,19.533383613095,48.1641844455894,64.7054636834116,34.8353197328807,44.6669524788661,0,0,0,0.782391344348039,0,0,0,0,0,23.9929126662563,9.42970784614748,12.4354705682712,0.257259436035947,0.85960031981627,0,0,0.528990979272033,0.633831403506179,0,0,5.39939830368839,4.94433181283487,5.6838409195688,2.69640099466564,1.53687322128622,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.367472397644862,0,0,0,0.383062014255563,0.153606533256243,0,0.182975287204819,0,0,0,0.45839474333043,0.294628585473668,0.711858403995515,0,0.227178579999552,0,0.289864488701678,0,0,0,0,0.448026887097336,2.10666630197628,0.170430322578058,0,0,0,0,0,0,0,0,0,1.25602267690966,14.7594593678888,1.7813056687779,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.628332956648377,0.247194967734374,0.722996784599558,6.19227386364912,1.61766849947409,4.19598885074748,3.87900202508178,0,0,0.41889341362691,1.78819938646014,8.02761334189666,4.79922184794726,5.46401976414178,0.149790639404823,1.37250180845588,0,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.509196819251581,3.98102305952298,0.252722758433675,0.841767423545896,0.130120442962704,0,0,0,0.340182495756639,0.12811372028485,0,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0.823128545631774,0.199034266818493,5.61770549850588,3.08817488537658,7.10408748488982,0.414251545071004,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0,0,0,0.583826711835847,0.822799249567402,0.492502392237286,0.972825714550269,0.877199924551994,3.29325172936576,2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| ||
|EntrezGene=15163 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=P49710,Q8CA06 | |||
|association_with_transcript=49bp_to_ENSMUST00000023531,NM_008225,uc007zdi.2_5end | |||
|description=CAGE_peak_2_at_Hcls1_5end | |||
|id=chr16:36935118..36935136,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.26e-10!32;CL:0002032!1.26e-10!32;CL:0000037!1.26e-10!32;CL:0000566!1.26e-10!32;CL:0000837!1.26e-10!32;CL:0002031!1.09e-08!25;CL:0000738!4.31e-08!17;CL:0002087!4.31e-08!17;CL:0000838!4.47e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.08e-17,32;CL:0002032,5.08e-17,32;CL:0000037,5.08e-17,32;CL:0000837,5.08e-17,32;CL:0002031,4.34e-14,25;CL:0002320,9.45e-12,46;CL:0000134,9.45e-12,46;CL:0000738,2.19e-11,17;CL:0002087,2.19e-11,17;CL:0000838,7.94e-10,12;CL:0000049,1.92e-09,19;CL:0000084,7.52e-09,11;CL:0000827,7.52e-09,11;CL:0000542,9.16e-09,13;CL:0000051,9.16e-09,13;CL:0000219,1.63e-08,54;CL:0000763,1.27e-07,16;CL:0000791,3.34e-07,9;CL:0000789,3.34e-07,9;CL:0002420,3.34e-07,9;CL:0002419,3.34e-07,9;CL:0000790,3.34e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.26e-20!48;UBERON:0002390!1.14e-18!45;UBERON:0003061!1.14e-18!45;UBERON:0002405!2.78e-17!70;UBERON:0004177!6.45e-11!29;UBERON:0003081!2.16e-10!88;UBERON:0005057!1.11e-08!51;UBERON:0002371!1.22e-08!16;UBERON:0001474!1.28e-08!22;UBERON:0004765!1.28e-08!22;UBERON:0001434!1.28e-08!22;UBERON:0003408!1.31e-08!24;UBERON:0002370!2.65e-08!23;UBERON:0000974!2.65e-08!23;UBERON:0004807!2.65e-08!23;UBERON:0005058!2.65e-08!23;UBERON:0003351!2.65e-08!23;UBERON:0009113!2.65e-08!23;UBERON:0003295!2.65e-08!23;UBERON:0009722!2.65e-08!23;UBERON:0005562!2.65e-08!23;UBERON:0007690!2.65e-08!23;UBERON:0006562!4.76e-08!24;UBERON:0001557!4.76e-08!24;UBERON:0001042!4.76e-08!24;UBERON:0008814!4.76e-08!24;UBERON:0009145!4.76e-08!24;UBERON:0002204!6.23e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.97e-32,48;UBERON:0002405,5.97e-32,48;UBERON:0002390,2.36e-29,45;UBERON:0003061,2.36e-29,45;UBERON:0004177,1.57e-17,29;UBERON:0005057,1.57e-17,29;UBERON:0000077,1.09e-14,35;UBERON:0003081,3.01e-14,87;UBERON:0003408,5.39e-14,24;UBERON:0002370,1.54e-13,23;UBERON:0000974,1.54e-13,23;UBERON:0004807,1.54e-13,23;UBERON:0005058,1.54e-13,23;UBERON:0003351,1.54e-13,23;UBERON:0009113,1.54e-13,23;UBERON:0003295,1.54e-13,23;UBERON:0009722,1.54e-13,23;UBERON:0005562,1.54e-13,23;UBERON:0007690,1.54e-13,23;UBERON:0006562,1.16e-12,24;UBERON:0001557,1.16e-12,24;UBERON:0001042,1.16e-12,24;UBERON:0008814,1.16e-12,24;UBERON:0009145,1.16e-12,24;UBERON:0001474,2.95e-12,22;UBERON:0004765,2.95e-12,22;UBERON:0001434,2.95e-12,22;UBERON:0002371,3.67e-12,16;UBERON:0002384,9.45e-12,46;UBERON:0002204,6.78e-11,32;UBERON:0001004,1.10e-10,42;UBERON:0000072,1.92e-10,27;UBERON:0000065,2.97e-10,41;UBERON:0000926,4.87e-10,120;UBERON:0004120,4.87e-10,120;UBERON:0006603,4.87e-10,120;UBERON:0001041,8.12e-10,80;UBERON:0007811,6.54e-07,36;UBERON:0005911,8.79e-07,69 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,8.00564605337773,7.46180227403834,8.89445200023575,2.05461561870606,2.71225340584144,5.9920255475922,6.20684857174882,4.33042690360362,6.68168382386426,4.19737126876888,22.7132759057931,21.9383093769182,22.4926515452956,1.10556277196391,16.5815888505478,14.6271881917804,8.79958325363737,8.02932483735095,0,0,0,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,0,0,0,52.3164538421135,19.533383613095,48.1641844455894,64.7054636834116,34.8353197328807,44.6669524788661,0,0,0,0.782391344348039,0,0,0,0,0,23.9929126662563,9.42970784614748,12.4354705682712,0.257259436035947,0.85960031981627,0,0,0.528990979272033,0.633831403506179,0,0,5.39939830368839,4.94433181283487,5.6838409195688,2.69640099466564,1.53687322128622,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.367472397644862,0,0,0,0.383062014255563,0.153606533256243,0,0.182975287204819,0,0,0,0.45839474333043,0.294628585473668,0.711858403995515,0,0.227178579999552,0,0.289864488701678,0,0,0,0,0.448026887097336,2.10666630197628,0.170430322578058,0,0,0,0,0,0,0,0,0,1.25602267690966,14.7594593678888,1.7813056687779,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.628332956648377,0.247194967734374,0.722996784599558,6.19227386364912,1.61766849947409,4.19598885074748,3.87900202508178,0,0,0.41889341362691,1.78819938646014,8.02761334189666,4.79922184794726,5.46401976414178,0.149790639404823,1.37250180845588,0,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.509196819251581,3.98102305952298,0.252722758433675,0.841767423545896,0.130120442962704,0,0,0,0.340182495756639,0.12811372028485,0,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0.823128545631774,0.199034266818493,5.61770549850588,3.08817488537658,7.10408748488982,0.414251545071004,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0,0,0,0.583826711835847,0.822799249567402,0.492502392237286,0.972825714550269,0.877199924551994,3.29325172936576,2.01309628140558,0.420579897128254,0,0.660837565967596,0.264450566663544,0.213288250535234,0.928946687441754,0.77320476793256,0.201683524623343,0.22237804384487,0.380451252225118,0.949058123089023,0.988193728344065,0.754005626400808,0.994782360205754,1.55971269695296,1.79763881730844,1.08069024937347,1.99141273254367,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.316182685621286,0.147610147979602,0.31399745568275,0.370191491765402,0.592905254174298,0.83422552858047,0.589676985339609,1.57403478669398,1.42002084971952,1.68824011826692,1.01850340712568,1.43848068725405,1.62135226775035,0.549122826376163,8.62609239164127,1.11642284300551,1.5601883655728,0.505157755894224,0.896987067609561,0,3.32555742299888,0,0.162964976442026,0.339490171550376,0.469380496577004,1.17254380209271,0.476087281772027,0.390267295715598,1.57635144106191,1.10732344824387,1.59454768657487,2.94953966488328,2.59027472798843,2.74833211304872,22.6186925908908,24.4757557718419,0.983528546038072,1.37968373152366,0.160550589987792,0.468846746368813,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0.963963949265421,0.567760340833074,0.534196811001766,0.488660878060728,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,1.47650946440386,0.307435147943927,1.29214146584111,0,1.06949213515416,0.948110273807448,0,0,0.340439605753788,0.36012218806262,0,0.643011105094777,0,0.178368817602071,0.329098041204242,0.304464949114599,1.17335854031855,0,0.661585194164886,0.98931751764888,0.484393280087717,0.422190474497091,0.119372344003136,0.328281799490123,1.1659233465194,1.29797711407357,9.3978984438819,4.33412422722767,2.77791791054568,5.27431679613135,7.79157098009843,14.1842467388044,15.4680371294408,14.6949024939841,12.9907975376158,1.90934123603023,0,0.203319467126849,0.432021363287205,0.627264888043406,0,0.269728692769641,0.661227645802687,1.04702376793612,0.777689839750757,2.4853572523477,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0,0,0.209718688851422,0,0.288030006257865,16.4325782726653,4.66267995167378,9.0385642305048,10.6535074841792,7.16106782669926,14.9011016085949,17.4283401803955,19.0519490055205,21.909719638748,19.280322083715,20.3668893976418,18.6144552212927,19.6272156946272,22.6741190232244,0.453460767230423,0,0,0,0.579568782096571,1.12609485270709,1.46521299413812,1.07184189539533,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,0.412070114477788,1.28367683836726,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.640251524048693,0.804096565378586,0,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,3.08582327146874,0.354951612318675,0.476872379894642,0.872078499793971,0.564656282491984,0.930760686808441,0.548783918618318,0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| |||
|short_description=p2@Hcls1 | |||
}} |
Revision as of 12:35, 13 September 2013
Short description: | p2@Hcls1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hcls1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 49bp_to_ENSMUST00000023531, NM_008225, uc007zdi.2_5end |
EntrezGene: | Hcls1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.08e-17 | 32 |
hematopoietic oligopotent progenitor cell | 5.08e-17 | 32 |
hematopoietic stem cell | 5.08e-17 | 32 |
hematopoietic multipotent progenitor cell | 5.08e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 4.34e-14 | 25 |
connective tissue cell | 9.45e-12 | 46 |
mesenchymal cell | 9.45e-12 | 46 |
leukocyte | 2.19e-11 | 17 |
nongranular leukocyte | 2.19e-11 | 17 |
lymphoid lineage restricted progenitor cell | 7.94e-10 | 12 |
common myeloid progenitor | 1.92e-09 | 19 |
T cell | 7.52e-09 | 11 |
pro-T cell | 7.52e-09 | 11 |
lymphocyte | 9.16e-09 | 13 |
common lymphoid progenitor | 9.16e-09 | 13 |
motile cell | 1.63e-08 | 54 |
myeloid cell | 1.27e-07 | 16 |
mature alpha-beta T cell | 3.34e-07 | 9 |
alpha-beta T cell | 3.34e-07 | 9 |
immature T cell | 3.34e-07 | 9 |
mature T cell | 3.34e-07 | 9 |
immature alpha-beta T cell | 3.34e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.