FFCP PHASE1:Mm9::chr1:82823582..82823586,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:82823582..82823586,-|id=chr1:82823582..82823586,-|ontology_enrichment_celltype=CL:0002563!5.13e-14!9;CL:0002251!5.13e-14!9;CL:0000239!6.11e-13!6;CL:0000677!6.11e-13!6;CL:0000212!6.11e-13!6;CL:0000584!6.11e-13!6;CL:0000075!5.77e-11!7;CL:0000066!4.91e-08!25;CL:0002076!8.44e-08!15;CL:0000473!4.69e-07!3;CL:0000627!4.69e-07!3;CL:0000682!4.69e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,4.28e-34,6;CL:0000677,4.28e-34,6;CL:0000584,4.28e-34,6;CL:0000075,2.51e-29,7;CL:0002563,5.86e-23,9;CL:0002251,5.86e-23,9;CL:0002076,5.23e-14,15;CL:0000066,6.45e-13,25;CL:0000223,1.25e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.54e-18!43;UBERON:0001242!1.99e-17!13;UBERON:0000060!1.99e-17!13;UBERON:0001262!1.99e-17!13;UBERON:0004786!1.99e-17!13;UBERON:0000344!2.47e-17!15;UBERON:0004923!1.26e-15!24;UBERON:0005409!1.69e-14!59;UBERON:0003350!5.13e-14!9;UBERON:0004808!5.13e-14!9;UBERON:0001277!5.13e-14!9;UBERON:0000485!3.46e-11!11;UBERON:0004119!1.42e-09!130;UBERON:0000925!1.42e-09!130;UBERON:0006595!1.42e-09!130;UBERON:0001007!5.11e-09!128;UBERON:0001555!5.11e-09!128;UBERON:0007026!5.11e-09!128;UBERON:0004921!1.60e-08!126;UBERON:0004185!1.60e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.86e-23,9;UBERON:0004808,5.86e-23,9;UBERON:0001277,5.86e-23,9;UBERON:0000485,6.75e-19,11;UBERON:0001242,4.44e-16,13;UBERON:0001262,4.44e-16,13;UBERON:0004786,4.44e-16,13;UBERON:0000160,8.93e-15,31;UBERON:0000344,5.23e-14,15;UBERON:0005409,8.06e-10,47;UBERON:0004923,6.22e-09,24|phase1_expression=0,5.58360652222978,8.18998630901165,25.1045295384669,23.041203577532,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,3.01533397311352,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,5.55346189993443,0,0,0,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,0.658795818896044,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr1:82823582..82823586,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:82823582..82823586,- | |||
|id=chr1:82823582..82823586,- | |||
|ontology_enrichment_celltype=CL:0002563!5.13e-14!9;CL:0002251!5.13e-14!9;CL:0000239!6.11e-13!6;CL:0000677!6.11e-13!6;CL:0000212!6.11e-13!6;CL:0000584!6.11e-13!6;CL:0000075!5.77e-11!7;CL:0000066!4.91e-08!25;CL:0002076!8.44e-08!15;CL:0000473!4.69e-07!3;CL:0000627!4.69e-07!3;CL:0000682!4.69e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.28e-34,6;CL:0000677,4.28e-34,6;CL:0000584,4.28e-34,6;CL:0000075,2.51e-29,7;CL:0002563,5.86e-23,9;CL:0002251,5.86e-23,9;CL:0002076,5.23e-14,15;CL:0000066,6.45e-13,25;CL:0000223,1.25e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.54e-18!43;UBERON:0001242!1.99e-17!13;UBERON:0000060!1.99e-17!13;UBERON:0001262!1.99e-17!13;UBERON:0004786!1.99e-17!13;UBERON:0000344!2.47e-17!15;UBERON:0004923!1.26e-15!24;UBERON:0005409!1.69e-14!59;UBERON:0003350!5.13e-14!9;UBERON:0004808!5.13e-14!9;UBERON:0001277!5.13e-14!9;UBERON:0000485!3.46e-11!11;UBERON:0004119!1.42e-09!130;UBERON:0000925!1.42e-09!130;UBERON:0006595!1.42e-09!130;UBERON:0001007!5.11e-09!128;UBERON:0001555!5.11e-09!128;UBERON:0007026!5.11e-09!128;UBERON:0004921!1.60e-08!126;UBERON:0004185!1.60e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.86e-23,9;UBERON:0004808,5.86e-23,9;UBERON:0001277,5.86e-23,9;UBERON:0000485,6.75e-19,11;UBERON:0001242,4.44e-16,13;UBERON:0001262,4.44e-16,13;UBERON:0004786,4.44e-16,13;UBERON:0000160,8.93e-15,31;UBERON:0000344,5.23e-14,15;UBERON:0005409,8.06e-10,47;UBERON:0004923,6.22e-09,24 | |||
|phase1_expression=0,5.58360652222978,8.18998630901165,25.1045295384669,23.041203577532,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,3.01533397311352,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,5.55346189993443,0,0,0,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,0.658795818896044,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr1:82823582..82823586,- | |||
}} |
Revision as of 21:04, 13 September 2013
Short description: | p@chr1:82823582..82823586, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:82823582..82823586, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.28e-34 | 6 |
gut absorptive cell | 4.28e-34 | 6 |
enterocyte | 4.28e-34 | 6 |
columnar/cuboidal epithelial cell | 2.51e-29 | 7 |
intestinal epithelial cell | 5.86e-23 | 9 |
epithelial cell of alimentary canal | 5.86e-23 | 9 |
endo-epithelial cell | 5.23e-14 | 15 |
epithelial cell | 6.45e-13 | 25 |
endodermal cell | 1.25e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.86e-23 | 9 |
gastrointestinal system epithelium | 5.86e-23 | 9 |
intestinal epithelium | 5.86e-23 | 9 |
simple columnar epithelium | 6.75e-19 | 11 |
intestinal mucosa | 4.44e-16 | 13 |
wall of intestine | 4.44e-16 | 13 |
gastrointestinal system mucosa | 4.44e-16 | 13 |
intestine | 8.93e-15 | 31 |
mucosa | 5.23e-14 | 15 |
gastrointestinal system | 8.06e-10 | 47 |
organ component layer | 6.22e-09 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.