FFCP PHASE1:Mm9::chr9:57613416..57613439,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=102414|HGNC=|MCL_coexpression_id=15|UniProt=O35492|association_with_transcript=227bp_to_ENSMUST00000065330,NM_007713,uc009pvr.1,uc009pvs.1_5end|description=CAGE_peak_4_at_Clk3_5end|id=chr9:57613416..57613439,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.11e-10!51;UBERON:0004177!1.34e-08!29;UBERON:0002405!1.17e-07!70;UBERON:0003929!1.32e-07!55;UBERON:0000490!2.49e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.37e-11,29;UBERON:0005057,9.37e-11,29;UBERON:0003929,2.95e-10,55;UBERON:0000490,6.83e-09,66;UBERON:0002390,1.30e-08,45;UBERON:0003061,1.30e-08,45;UBERON:0000077,6.97e-08,35;UBERON:0005911,1.10e-07,69;UBERON:0001041,1.24e-07,80;UBERON:0003408,1.55e-07,24;UBERON:0002370,1.76e-07,23;UBERON:0000974,1.76e-07,23;UBERON:0004807,1.76e-07,23;UBERON:0005058,1.76e-07,23;UBERON:0003351,1.76e-07,23;UBERON:0009113,1.76e-07,23;UBERON:0003295,1.76e-07,23;UBERON:0009722,1.76e-07,23;UBERON:0005562,1.76e-07,23;UBERON:0007690,1.76e-07,23;UBERON:0002193,2.57e-07,48;UBERON:0002405,2.57e-07,48;UBERON:0006562,7.42e-07,24;UBERON:0001557,7.42e-07,24;UBERON:0001042,7.42e-07,24;UBERON:0008814,7.42e-07,24;UBERON:0009145,7.42e-07,24;UBERON:0002368,8.65e-07,60|phase1_expression=1.44133962394315,1.04692622291808,3.18499467572675,4.23449895829562,1.50268718983904,2.35030980676646,0.467225281191051,2.7115897922731,2.956563165185,3.97909694747389,0.856089841127525,0.159544317990673,2.05440875917447,2.53519167015092,5.99597571268193,6.2767332890846,8.39474253753776,0.157731082679119,0,0,0.765389611359628,0.992909512008853,0.522399578277871,0.799962113967033,0.91763712426868,2.8711598205751,1.29228598847722,2.15471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0.635030673459631,0.61506478758457,0,1.1554064790051,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,2.94115744015507,0,0,0.881277725829041,0.811015449756117,0.734187008646726,0,0.436050312760893,0.878744730937887,1.36100929351998,0.419959264876088,0,0.838913030288682,2.17608642603403,1.68046899571232,3.08711323243136,2.57880095944881,2.57836046138721,1.21389876515759,0,1.26766280701236,1.35537812827653,2.66788438833342,0.899899717281399,2.96659908770092,2.1314403448383,0.898800331555214,0,0.518448061542388,1.08004750665353,0.630974884054146,0.571301968807607,0.441737081903227,1.34739879136449,0.766763768145891,2.75765635983006,2.20231761998777,0.127687338085188,0.768032666281217,0.395658863190582,0.548925861614458,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,0.854230084794618,0.372798891650601,0.605809546665472,0.604572480854284,0.869593466105033,0,2.03991400112325,1.07940638327563,0.649776417447669,0,1.12355536105401,0.681721290312231,0.779358013808606,1.06001872353102,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.11418387971906,0.517875767294343,1.1875371125186,1.90833859442749,1.21786191324856,0.461230994512117,0.60289056221049,0.705532242814229,0.879666139307728,0.247194967734374,0.722996784599558,1.76922110389975,1.45590164952668,2.42925670306433,2.90925151881133,0,0.878342391034642,0.41889341362691,0.766371165625774,1.55759661857696,1.19980546198682,1.52484272487678,0.449371918214468,0,1.13088916901578,1.91206752211504,1.53429274398198,1.45451631191692,0.324482526135515,2.24046600470696,3.73220911830279,1.0108910337347,0.631325567659422,0.910843100738926,1.14951052216736,0.360124259610698,0.150704817835715,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,1.11218899690239,0.696504333044333,0.823128545631774,1.59227413454795,0,1.28673953557358,1.42081749697796,1.44988040774851,1.17263029990548,0.540186184383045,0.946978942340841,1.18058539048442,0.462801338662135,0.930135779001631,0.804820204198858,0.700592054203017,1.15191894939436,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.134206418760372,0.841159794256509,1.3377599609307,0.991256348951394,0.264450566663544,0.639864751605702,0.464473343720877,0.38660238396628,0.403367049246685,0.667134131534611,0.570676878337677,0,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0.685491075658373,0,0.814605311381257,0,0.701358198903186,0.569128834118316,0.295220295959204,0.470996183524124,0.123397163921801,1.77871576252289,4.83850806576673,6.4864468387357,9.44420872016386,8.92584534109413,4.82354319504834,11.4581633301639,4.60313819921297,2.10775794807546,1.09824565275233,1.43768206527355,1.48856379067401,0,1.51547326768267,2.15276896226295,0.482443521363367,1.29327233116623,0.757965647081939,0.977789858652155,1.18821560042632,0.469380496577004,0.670025029767263,1.42826184531608,1.36593553500459,0.157635144106191,1.99318220683897,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| ||
|EntrezGene=102414 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=O35492 | |||
|association_with_transcript=227bp_to_ENSMUST00000065330,NM_007713,uc009pvr.1,uc009pvs.1_5end | |||
|description=CAGE_peak_4_at_Clk3_5end | |||
|id=chr9:57613416..57613439,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.11e-10!51;UBERON:0004177!1.34e-08!29;UBERON:0002405!1.17e-07!70;UBERON:0003929!1.32e-07!55;UBERON:0000490!2.49e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.37e-11,29;UBERON:0005057,9.37e-11,29;UBERON:0003929,2.95e-10,55;UBERON:0000490,6.83e-09,66;UBERON:0002390,1.30e-08,45;UBERON:0003061,1.30e-08,45;UBERON:0000077,6.97e-08,35;UBERON:0005911,1.10e-07,69;UBERON:0001041,1.24e-07,80;UBERON:0003408,1.55e-07,24;UBERON:0002370,1.76e-07,23;UBERON:0000974,1.76e-07,23;UBERON:0004807,1.76e-07,23;UBERON:0005058,1.76e-07,23;UBERON:0003351,1.76e-07,23;UBERON:0009113,1.76e-07,23;UBERON:0003295,1.76e-07,23;UBERON:0009722,1.76e-07,23;UBERON:0005562,1.76e-07,23;UBERON:0007690,1.76e-07,23;UBERON:0002193,2.57e-07,48;UBERON:0002405,2.57e-07,48;UBERON:0006562,7.42e-07,24;UBERON:0001557,7.42e-07,24;UBERON:0001042,7.42e-07,24;UBERON:0008814,7.42e-07,24;UBERON:0009145,7.42e-07,24;UBERON:0002368,8.65e-07,60 | |||
|phase1_expression=1.44133962394315,1.04692622291808,3.18499467572675,4.23449895829562,1.50268718983904,2.35030980676646,0.467225281191051,2.7115897922731,2.956563165185,3.97909694747389,0.856089841127525,0.159544317990673,2.05440875917447,2.53519167015092,5.99597571268193,6.2767332890846,8.39474253753776,0.157731082679119,0,0,0.765389611359628,0.992909512008853,0.522399578277871,0.799962113967033,0.91763712426868,2.8711598205751,1.29228598847722,2.15471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0.635030673459631,0.61506478758457,0,1.1554064790051,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,2.94115744015507,0,0,0.881277725829041,0.811015449756117,0.734187008646726,0,0.436050312760893,0.878744730937887,1.36100929351998,0.419959264876088,0,0.838913030288682,2.17608642603403,1.68046899571232,3.08711323243136,2.57880095944881,2.57836046138721,1.21389876515759,0,1.26766280701236,1.35537812827653,2.66788438833342,0.899899717281399,2.96659908770092,2.1314403448383,0.898800331555214,0,0.518448061542388,1.08004750665353,0.630974884054146,0.571301968807607,0.441737081903227,1.34739879136449,0.766763768145891,2.75765635983006,2.20231761998777,0.127687338085188,0.768032666281217,0.395658863190582,0.548925861614458,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,0.854230084794618,0.372798891650601,0.605809546665472,0.604572480854284,0.869593466105033,0,2.03991400112325,1.07940638327563,0.649776417447669,0,1.12355536105401,0.681721290312231,0.779358013808606,1.06001872353102,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.11418387971906,0.517875767294343,1.1875371125186,1.90833859442749,1.21786191324856,0.461230994512117,0.60289056221049,0.705532242814229,0.879666139307728,0.247194967734374,0.722996784599558,1.76922110389975,1.45590164952668,2.42925670306433,2.90925151881133,0,0.878342391034642,0.41889341362691,0.766371165625774,1.55759661857696,1.19980546198682,1.52484272487678,0.449371918214468,0,1.13088916901578,1.91206752211504,1.53429274398198,1.45451631191692,0.324482526135515,2.24046600470696,3.73220911830279,1.0108910337347,0.631325567659422,0.910843100738926,1.14951052216736,0.360124259610698,0.150704817835715,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,1.11218899690239,0.696504333044333,0.823128545631774,1.59227413454795,0,1.28673953557358,1.42081749697796,1.44988040774851,1.17263029990548,0.540186184383045,0.946978942340841,1.18058539048442,0.462801338662135,0.930135779001631,0.804820204198858,0.700592054203017,1.15191894939436,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.134206418760372,0.841159794256509,1.3377599609307,0.991256348951394,0.264450566663544,0.639864751605702,0.464473343720877,0.38660238396628,0.403367049246685,0.667134131534611,0.570676878337677,0,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0.685491075658373,0,0.814605311381257,0,0.701358198903186,0.569128834118316,0.295220295959204,0.470996183524124,0.123397163921801,1.77871576252289,4.83850806576673,6.4864468387357,9.44420872016386,8.92584534109413,4.82354319504834,11.4581633301639,4.60313819921297,2.10775794807546,1.09824565275233,1.43768206527355,1.48856379067401,0,1.51547326768267,2.15276896226295,0.482443521363367,1.29327233116623,0.757965647081939,0.977789858652155,1.18821560042632,0.469380496577004,0.670025029767263,1.42826184531608,1.36593553500459,0.157635144106191,1.99318220683897,0.637819074629948,0.983179888294428,0.518054945597687,0.578596234326046,0,0.54390568381871,1.47529281905711,0.551873492609465,0.963303539926752,0.937693492737625,0.327869890753351,1.26235463602186,0.315508219416257,1.17131623288992,1.07711698866399,0.955875191810208,1.33679204449436,0.283076530788832,0.404810701674894,0.876767573733936,1.58115111178609,0.963963949265421,1.27746076687442,1.78065603667255,0.488660878060728,0.494910368917606,1.32745138339963,0.728341908464944,0,0.188605079755898,0.885905678642318,0,0.258428293168221,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0.680879211507576,0.36012218806262,0.517434735131018,0.214337035031592,1.06404140185364,0.356737635204141,1.15184314421485,0.913394847343798,0.469343416127421,1.48282449604674,0.661585194164886,2.30840754118072,0.322928853391811,0.603129249281559,0.835606408021955,0.984845398470368,0.582961673259701,0.741701208042039,5.80960994712699,1.44470807574256,2.77791791054568,4.52084296811258,4.51090951479383,6.63456702298916,3.39956859987711,3.91864066506242,2.3493995546752,1.90934123603023,1.42351197111511,1.01659733563424,0.86404272657441,0.418176592028937,0.87345025498471,0.809186078308924,1.07449492442937,0.785267825952089,0.648074866458964,1.24267862617385,1.69107881605257,0.747582730219894,0.992750942742586,1.1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| |||
|short_description=p4@Clk3 | |||
}} |
Revision as of 18:20, 14 September 2013
Short description: | p4@Clk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Clk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 227bp_to_ENSMUST00000065330, NM_007713, uc009pvr.1, uc009pvs.1_5end |
EntrezGene: | Clk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 9.37e-11 | 29 |
immune organ | 9.37e-11 | 29 |
gut epithelium | 2.95e-10 | 55 |
unilaminar epithelium | 6.83e-09 | 66 |
hematopoietic system | 1.30e-08 | 45 |
blood island | 1.30e-08 | 45 |
mixed endoderm/mesoderm-derived structure | 6.97e-08 | 35 |
endo-epithelium | 1.10e-07 | 69 |
foregut | 1.24e-07 | 80 |
gland of gut | 1.55e-07 | 24 |
thymus | 1.76e-07 | 23 |
neck | 1.76e-07 | 23 |
respiratory system epithelium | 1.76e-07 | 23 |
hemolymphoid system gland | 1.76e-07 | 23 |
pharyngeal epithelium | 1.76e-07 | 23 |
thymic region | 1.76e-07 | 23 |
pharyngeal gland | 1.76e-07 | 23 |
entire pharyngeal arch endoderm | 1.76e-07 | 23 |
thymus primordium | 1.76e-07 | 23 |
early pharyngeal endoderm | 1.76e-07 | 23 |
hemolymphoid system | 2.57e-07 | 48 |
immune system | 2.57e-07 | 48 |
pharynx | 7.42e-07 | 24 |
upper respiratory tract | 7.42e-07 | 24 |
chordate pharynx | 7.42e-07 | 24 |
pharyngeal arch system | 7.42e-07 | 24 |
pharyngeal region of foregut | 7.42e-07 | 24 |
endocrine gland | 8.65e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.