Personal tools

FFCP PHASE1:Mm9::chr19:47697142..47697154,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=20874|HGNC=|MCL_coexpression_id=5|UniProt=|association_with_transcript=0bp_to_ENSMUST00000130115_5end|description=CAGE_peak_3_at_Slk_5end|id=chr19:47697142..47697154,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.93e-08!18;UBERON:0000948!9.93e-08!18;UBERON:0005498!9.93e-08!18;UBERON:0004140!9.93e-08!18;UBERON:0009881!9.93e-08!18;UBERON:0004141!9.93e-08!18;UBERON:0003084!9.93e-08!18;UBERON:0007005!9.93e-08!18;UBERON:0004139!9.93e-08!18;UBERON:0004291!9.93e-08!18;UBERON:0009569!1.33e-07!66;UBERON:0003103!4.32e-07!43;UBERON:0000926!8.77e-07!193;UBERON:0004120!8.77e-07!193;UBERON:0006603!8.77e-07!193;UBERON:0004872!9.00e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.08e-09,134;UBERON:0007100,2.17e-09,18;UBERON:0000948,2.17e-09,18;UBERON:0005498,2.17e-09,18;UBERON:0004140,2.17e-09,18;UBERON:0009881,2.17e-09,18;UBERON:0004141,2.17e-09,18;UBERON:0003084,2.17e-09,18;UBERON:0007005,2.17e-09,18;UBERON:0004139,2.17e-09,18;UBERON:0004291,2.17e-09,18;UBERON:0003103,2.45e-09,43;UBERON:0009569,8.80e-08,66;UBERON:0004872,2.72e-07,33;UBERON:0001041,5.49e-07,80|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,1.12630977721333,0.70219357896598,0.171217968225505,0.398860794976682,0,0.262261207256992,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,0.425216450755349,0.695036658406197,0.783599367416806,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0,0,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0.672187598284928,1.54355661621568,0.573066879877513,0.515672092277442,0,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0,0,0.220868540951614,0,0.0958454710182364,0,0,1.0214987046815,1.38245879930619,0.263772575460388,0.0914876436024097,0.52091337055676,0,0.56276261003168,1.06958773443767,1.17851434189467,0,0,0.227178579999552,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,1.53387290320252,0.259786004602869,2.47337702157238,0,1.28326477414318,0,0,0.649473123033642,1.77351905832569,3.0331466700887,0.11418387971906,0,0,0.693941307064543,1.21786191324856,0.922461989024234,1.50722640552623,2.4693628498498,0.502666365318702,0.988779870937496,0,0,0.485300549842228,1.98757366614354,0.969750506270444,0,0.878342391034642,0.628340120440365,0.766371165625774,0.239630249011841,0,0.127070227073065,0,0.457500602818626,1.50785222535437,0.347648640384553,1.27857728665165,0,0.648965052271031,2.24046600470696,0.746441823660558,0,0.420883711772948,0.910843100738926,0,0,1.50704817835715,1.2246569847239,1.66547836370305,0.374806898238915,1.29351685369508,0,0.756424320671277,0.175951124163949,0.43839146485515,1.11218899690239,0,0.411564272815887,0.199034266818493,0,0,1.13665399758237,0.414251545071004,1.64168241986767,1.2604344302271,0.946978942340841,2.55793501271625,3.5481435964097,7.44108623201305,2.14618721119695,5.25444040652263,3.62031669809657,7.55170334763838,2.35099547682982,1.60819986167866,2.19550115291051,1.20785776884335,0.420579897128254,0.617427674275707,0.330418782983798,0.528901133327089,0.853153002140936,1.85789337488351,0.38660238396628,0.201683524623343,1.33426826306922,0,0.474529061544512,0.658795818896044,0.754005626400808,0.596869416123452,0.58489226135736,0,2.59365659849633,0.398282546508734,0.189667900953082,1.14248512609729,2.25415471346161,4.07302655690629,1.74557238450863,2.73529697572242,0.948548056863859,1.18088118383682,3.1399745568275,0.246794327843601,0.296452627087149,0.667380422864376,0.196558995113203,1.34917267430912,0,0.72353147925725,0,0.575392274901621,2.2698931748505,1.92192989231657,38.8174157623857,0.744281895337007,2.49630138491648,0.757736633841335,0.179397413521912,1.4473305640901,0.739012760666419,0.189491411770485,0.325929952884052,1.01847051465113,2.34690248288502,0.502518772325447,0.238043640886014,2.92700471786698,1.10344600874334,3.10050565508285,2.23236676120482,5.40748938561935,3.7990696010497,1.44649058581512,0,1.63171705145613,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.252470927204373,0.631016438832513,0.780877488593277,1.72338718186239,0.477937595905104,0.222798674082394,0,0.809621403349789,0.876767573733936,0,0,0.141940085208269,0,1.46598263418218,0.164970122972535,0,0,0.604647113929502,0.377210159511796,0,0,1.29214146584111,1.81766864738753,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,1.78368817602071,1.15184314421485,0,0.938686832254841,0.42366414172764,0.441056796109924,0,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,1.7488850197791,0,0.683483523191411,1.03193433981611,0.555583582109135,3.95573759709851,2.7338845544205,1.37266903923914,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0.316335993581135,0.406638934253697,1.72808545314882,2.92723614420256,1.31017538247707,1.61837215661785,0.743881101528023,1.30877970992015,0.648074866458964,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,1.85851738039856,2.34714477291508,1.95306577265925,0.419437377702843,0.966336483304024,0.288030006257865,0.632022241256357,0,0.821687657318618,1.81889152168913,1.25318686967237,0.79472541912506,1.32214994471966,0.295379054349154,1.61546319917036,1.37172251979,1.71404514732629,1.55932609183604,1.25075394132428,1.05189211963412,0.680191150845634,0.887943813496259,0.0897138566094757,0.839423081820392,0.579568782096571,0.563047426353546,0.183151624267265,1.07184189539533,0,0,0.460325236507177,3.43737308063638,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0.62272408550506,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0,0.760437899670719,0.565879024158229,0.936415074698824,0.192075457214608,0.574354689556133,0.476293691283074,0.695305955669133,0.192909220463705,1.23625770240992,0.883193520806384,1.37147700954166,3.19456451086807,0.715308569841963,0.726732083161643,0.658765662907314,0.507687647350059,0.548783918618318,1.57841826862706,0.679020569229309,0,0.474540072496697,0.689531376628944,0.818462086339379,0.619747364743864,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p3@Slk}}
|EntrezGene=20874
|HGNC=
|MCL_coexpression_id=5
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000130115_5end
|description=CAGE_peak_3_at_Slk_5end
|id=chr19:47697142..47697154,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!9.93e-08!18;UBERON:0000948!9.93e-08!18;UBERON:0005498!9.93e-08!18;UBERON:0004140!9.93e-08!18;UBERON:0009881!9.93e-08!18;UBERON:0004141!9.93e-08!18;UBERON:0003084!9.93e-08!18;UBERON:0007005!9.93e-08!18;UBERON:0004139!9.93e-08!18;UBERON:0004291!9.93e-08!18;UBERON:0009569!1.33e-07!66;UBERON:0003103!4.32e-07!43;UBERON:0000926!8.77e-07!193;UBERON:0004120!8.77e-07!193;UBERON:0006603!8.77e-07!193;UBERON:0004872!9.00e-07!33
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.08e-09,134;UBERON:0007100,2.17e-09,18;UBERON:0000948,2.17e-09,18;UBERON:0005498,2.17e-09,18;UBERON:0004140,2.17e-09,18;UBERON:0009881,2.17e-09,18;UBERON:0004141,2.17e-09,18;UBERON:0003084,2.17e-09,18;UBERON:0007005,2.17e-09,18;UBERON:0004139,2.17e-09,18;UBERON:0004291,2.17e-09,18;UBERON:0003103,2.45e-09,43;UBERON:0009569,8.80e-08,66;UBERON:0004872,2.72e-07,33;UBERON:0001041,5.49e-07,80
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,1.12630977721333,0.70219357896598,0.171217968225505,0.398860794976682,0,0.262261207256992,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,0.425216450755349,0.695036658406197,0.783599367416806,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0,0,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0.672187598284928,1.54355661621568,0.573066879877513,0.515672092277442,0,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0,0,0.220868540951614,0,0.0958454710182364,0,0,1.0214987046815,1.38245879930619,0.263772575460388,0.0914876436024097,0.52091337055676,0,0.56276261003168,1.06958773443767,1.17851434189467,0,0,0.227178579999552,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,1.53387290320252,0.259786004602869,2.47337702157238,0,1.28326477414318,0,0,0.649473123033642,1.77351905832569,3.0331466700887,0.11418387971906,0,0,0.693941307064543,1.21786191324856,0.922461989024234,1.50722640552623,2.4693628498498,0.502666365318702,0.988779870937496,0,0,0.485300549842228,1.98757366614354,0.969750506270444,0,0.878342391034642,0.628340120440365,0.766371165625774,0.239630249011841,0,0.127070227073065,0,0.457500602818626,1.50785222535437,0.347648640384553,1.27857728665165,0,0.648965052271031,2.24046600470696,0.746441823660558,0,0.420883711772948,0.910843100738926,0,0,1.50704817835715,1.2246569847239,1.66547836370305,0.374806898238915,1.29351685369508,0,0.756424320671277,0.175951124163949,0.43839146485515,1.11218899690239,0,0.411564272815887,0.199034266818493,0,0,1.13665399758237,0.414251545071004,1.64168241986767,1.2604344302271,0.946978942340841,2.55793501271625,3.5481435964097,7.44108623201305,2.14618721119695,5.25444040652263,3.62031669809657,7.55170334763838,2.35099547682982,1.60819986167866,2.19550115291051,1.20785776884335,0.420579897128254,0.617427674275707,0.330418782983798,0.528901133327089,0.853153002140936,1.85789337488351,0.38660238396628,0.201683524623343,1.33426826306922,0,0.474529061544512,0.658795818896044,0.754005626400808,0.596869416123452,0.58489226135736,0,2.59365659849633,0.398282546508734,0.189667900953082,1.14248512609729,2.25415471346161,4.07302655690629,1.74557238450863,2.73529697572242,0.948548056863859,1.18088118383682,3.1399745568275,0.246794327843601,0.296452627087149,0.667380422864376,0.196558995113203,1.34917267430912,0,0.72353147925725,0,0.575392274901621,2.2698931748505,1.92192989231657,38.8174157623857,0.744281895337007,2.49630138491648,0.757736633841335,0.179397413521912,1.4473305640901,0.739012760666419,0.189491411770485,0.325929952884052,1.01847051465113,2.34690248288502,0.502518772325447,0.238043640886014,2.92700471786698,1.10344600874334,3.10050565508285,2.23236676120482,5.40748938561935,3.7990696010497,1.44649058581512,0,1.63171705145613,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.252470927204373,0.631016438832513,0.780877488593277,1.72338718186239,0.477937595905104,0.222798674082394,0,0.809621403349789,0.876767573733936,0,0,0.141940085208269,0,1.46598263418218,0.164970122972535,0,0,0.604647113929502,0.377210159511796,0,0,1.29214146584111,1.81766864738753,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,1.78368817602071,1.15184314421485,0,0.938686832254841,0.42366414172764,0.441056796109924,0,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,1.7488850197791,0,0.683483523191411,1.03193433981611,0.555583582109135,3.95573759709851,2.7338845544205,1.37266903923914,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0.316335993581135,0.406638934253697,1.72808545314882,2.92723614420256,1.31017538247707,1.61837215661785,0.743881101528023,1.30877970992015,0.648074866458964,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,1.85851738039856,2.34714477291508,1.95306577265925,0.419437377702843,0.966336483304024,0.288030006257865,0.632022241256357,0,0.821687657318618,1.81889152168913,1.25318686967237,0.79472541912506,1.32214994471966,0.295379054349154,1.61546319917036,1.37172251979,1.71404514732629,1.55932609183604,1.25075394132428,1.05189211963412,0.680191150845634,0.887943813496259,0.0897138566094757,0.839423081820392,0.579568782096571,0.563047426353546,0.183151624267265,1.07184189539533,0,0,0.460325236507177,3.43737308063638,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0.62272408550506,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0,0.760437899670719,0.565879024158229,0.936415074698824,0.192075457214608,0.574354689556133,0.476293691283074,0.695305955669133,0.192909220463705,1.23625770240992,0.883193520806384,1.37147700954166,3.19456451086807,0.715308569841963,0.726732083161643,0.658765662907314,0.507687647350059,0.548783918618318,1.57841826862706,0.679020569229309,0,0.474540072496697,0.689531376628944,0.818462086339379,0.619747364743864,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p3@Slk
}}

Revision as of 17:56, 13 September 2013

Short description:p3@Slk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Slk_5end
Coexpression cluster:MCL_coexpression_mm9:5
Association with transcript: 0bp_to_ENSMUST00000130115_5end
EntrezGene:Slk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Slk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A838.82
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium1.08e-09134
primary circulatory organ2.17e-0918
heart2.17e-0918
primitive heart tube2.17e-0918
primary heart field2.17e-0918
anterior lateral plate mesoderm2.17e-0918
heart tube2.17e-0918
heart primordium2.17e-0918
cardiac mesoderm2.17e-0918
cardiogenic plate2.17e-0918
heart rudiment2.17e-0918
compound organ2.45e-0943
subdivision of trunk8.80e-0866
splanchnic layer of lateral plate mesoderm2.72e-0733
foregut5.49e-0780







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:47697142..47697154,%2B&oldid=2959542"