FFCP PHASE1:Hg19::chr6:31138439..31138475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5460 | |EntrezGene=5460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9221 | |HGNC=9221 | ||
|TSSclassifier=S | |||
|UniProt=Q01860,D2IYK3 | |UniProt=Q01860,D2IYK3 | ||
|association_with_transcript=0bp_to_ENST00000259915,NM_002701,uc003nsv.2_5end | |association_with_transcript=0bp_to_ENST00000259915,NM_002701,uc003nsv.2_5end |
Revision as of 05:00, 10 July 2013
Short description: | p1@POU5F1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_POU5F1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000259915, NM_002701, uc003nsv.2_5end |
EntrezGene: | POU5F1 |
HGNC: | 9221 |
UniProt: | Q01860D2IYK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@POU5F1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.45e-66 | 5 |
germ line cell | 1.54e-30 | 7 |
germ cell | 1.54e-30 | 7 |
neuron | 8.91e-21 | 6 |
neuroblast | 8.91e-21 | 6 |
electrically signaling cell | 8.91e-21 | 6 |
neuronal stem cell | 9.46e-16 | 8 |
melanocyte | 1.75e-12 | 10 |
melanoblast | 1.75e-12 | 10 |
pigment cell | 4.43e-09 | 14 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
testis | 8.88e-27 | 8 |
male reproductive organ | 1.39e-19 | 11 |
gonad | 1.04e-15 | 21 |
indifferent external genitalia | 1.04e-15 | 21 |
indifferent gonad | 1.04e-15 | 21 |
gonad primordium | 1.04e-15 | 21 |
external genitalia | 5.39e-15 | 22 |
male organism | 6.12e-10 | 22 |
male reproductive system | 6.12e-10 | 22 |
body cavity | 3.80e-07 | 46 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.01e-21 | 22 |
germ cell cancer | 3.01e-21 | 22 |
Showing 1 to 2 of 2 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.