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Coexpression cluster:C38: Difference between revisions

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|tfbs_overrepresentation_for_novel_motifs=0.0928819,0.00233842,0.0751152,0.118382,1.31053,1.13784,0.170063,0.444173,0.00175312,0.00271508,0.155258,0.171616,0.0100866,0.522254,1.16087,0.241917,0.111366,0.258391,0.137537,0.0811203,2.2126,7.69193e-06,0.0304055,3.79576,0.232301,0.116814,0.00341301,0.12884,0.000348393,0.24308,0.0133574,0.169029,0.0309074,0.0119182,0.0108337,0.815686,0.0370406,0.159271,0.411849,0.640884,1.75134,0.00763348,0.0203655,0.403385,4.68107e-06,0.00672415,0.0562454,0.165123,0.156471,0.149583,0.0968918,0.105425,0.0378104,0.0764851,0.0332605,0.0710266,0.0609617,0.159812,0.0352758,0.0533631,0.0948748,0.128969,0.0161162,0.281581,0.171984,0.0248114,0.165152,0.8707,0.232102,0.108604,0.0458864,0.131509,0.0126047,1.46392,4.147e-06,7.59952e-05,0.0803869,0.90853,0.325924,0.955679,1.42214,0.278504,2.53772,1.42869,0.000621257,2.45421e-14,0.0516224,1.30057,0.205376,0.691008,1.07318,0.08277,0.0714094,2.56692,0.00102738,0.256296,0.594393,0.769507,0.00151171,0.739557,0.633768,0.0665611,2.70288,0.0682848,0.241834,0.00824829,0.0548587,0.182827,0.688317,2.16434e-05,1.0571,0.27552,0.063526,0.304718,0.221107,0.756947,2.97534e-07,0.0475089,0.267922,0.693323,0.268914,0.479714,1.10558,0.989197,0.205189,0.0165725,1.46631,0.441013,0.109103,0.151917,0.156741,0.533389,0.387611,0.436307,0.800326,0.996578,0.885918,0.542865,0.667416,2.63817,0.399789,0.352988,0.112206,0.569846,0.733348,0.708228,0.789396,0.266392,0.305868,0.00496782,3.37849e-05,1.65815e-09,0.262251,0.0176287,0.885374,1.71753,0.233468,0.50417,0.0188488,0.00116174,0.350608,0.226485,0.0869108,0.26073,0.399624,0.230557,0.572554,0.380505,4.56127e-14
|tfbs_overrepresentation_for_novel_motifs=0.0928819,0.00233842,0.0751152,0.118382,1.31053,1.13784,0.170063,0.444173,0.00175312,0.00271508,0.155258,0.171616,0.0100866,0.522254,1.16087,0.241917,0.111366,0.258391,0.137537,0.0811203,2.2126,7.69193e-06,0.0304055,3.79576,0.232301,0.116814,0.00341301,0.12884,0.000348393,0.24308,0.0133574,0.169029,0.0309074,0.0119182,0.0108337,0.815686,0.0370406,0.159271,0.411849,0.640884,1.75134,0.00763348,0.0203655,0.403385,4.68107e-06,0.00672415,0.0562454,0.165123,0.156471,0.149583,0.0968918,0.105425,0.0378104,0.0764851,0.0332605,0.0710266,0.0609617,0.159812,0.0352758,0.0533631,0.0948748,0.128969,0.0161162,0.281581,0.171984,0.0248114,0.165152,0.8707,0.232102,0.108604,0.0458864,0.131509,0.0126047,1.46392,4.147e-06,7.59952e-05,0.0803869,0.90853,0.325924,0.955679,1.42214,0.278504,2.53772,1.42869,0.000621257,2.45421e-14,0.0516224,1.30057,0.205376,0.691008,1.07318,0.08277,0.0714094,2.56692,0.00102738,0.256296,0.594393,0.769507,0.00151171,0.739557,0.633768,0.0665611,2.70288,0.0682848,0.241834,0.00824829,0.0548587,0.182827,0.688317,2.16434e-05,1.0571,0.27552,0.063526,0.304718,0.221107,0.756947,2.97534e-07,0.0475089,0.267922,0.693323,0.268914,0.479714,1.10558,0.989197,0.205189,0.0165725,1.46631,0.441013,0.109103,0.151917,0.156741,0.533389,0.387611,0.436307,0.800326,0.996578,0.885918,0.542865,0.667416,2.63817,0.399789,0.352988,0.112206,0.569846,0.733348,0.708228,0.789396,0.266392,0.305868,0.00496782,3.37849e-05,1.65815e-09,0.262251,0.0176287,0.885374,1.71753,0.233468,0.50417,0.0188488,0.00116174,0.350608,0.226485,0.0869108,0.26073,0.399624,0.230557,0.572554,0.380505,4.56127e-14
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;0.00644352,MA0006.1;0.129559,MA0007.1;0.00328009,MA0009.1;0.106606,MA0014.1;1.33318e-13,MA0017.1;0.0489001,MA0019.1;0.25255,MA0024.1;0.106616,MA0025.1;0.0932021,MA0027.1;0.790244,MA0028.1;7.28261e-06,MA0029.1;0.314087,MA0030.1;0.907895,MA0031.1;0.425506,MA0038.1;0.501401,MA0040.1;2.40833,MA0041.1;2.58041,MA0042.1;0.977245,MA0043.1;0.0227983,MA0046.1;0.269117,MA0048.1;4.39114e-09,MA0050.1;0.133566,MA0051.1;0.05339,MA0052.1;2.45203,MA0055.1;4.57129e-07,MA0056.1;0,MA0057.1;0.446247,MA0058.1;0.00145589,MA0059.1;0.026756,MA0060.1;0.00180568,MA0061.1;4.80918e-05,MA0063.1;0,MA0066.1;0.403145,MA0067.1;0.158043,MA0068.1;0.115688,MA0069.1;0.162324,MA0070.1;0.0394406,MA0071.1;0.126828,MA0072.1;0.343508,MA0073.1;2.96601e-07,MA0074.1;0.0191864,MA0076.1;0.00167077,MA0077.1;0.0133614,MA0078.1;0.186391,MA0081.1;0.168011,MA0083.1;1.33897,MA0084.1;0.17385,MA0087.1;0.479396,MA0088.1;0.0328874,MA0089.1;0,MA0090.1;0.655271,MA0091.1;0.0122919,MA0092.1;0.109032,MA0093.1;0.0018435,MA0095.1;0,MA0098.1;0,MA0100.1;0.112812,MA0101.1;0.155327,MA0103.1;0.0307417,MA0105.1;0.000597185,MA0106.1;0.00900761,MA0107.1;0.196198,MA0108.2;0.702271,MA0109.1;0,MA0111.1;0.0998599,MA0113.1;0.0250621,MA0114.1;0.00367943,MA0115.1;0.0322933,MA0116.1;0.182027,MA0117.1;0.00306131,MA0119.1;0.0844557,MA0122.1;0.654177,MA0124.1;0.287789,MA0125.1;0.437162,MA0130.1;0,MA0131.1;0.685517,MA0132.1;0,MA0133.1;0,MA0135.1;0.0747319,MA0136.1;0.344841,MA0139.1;0.0569225,MA0140.1;0.221705,MA0141.1;0.0365903,MA0142.1;3.5728,MA0143.1;0.911113,MA0144.1;0.0978679,MA0145.1;2.29194e-05,MA0146.1;0,MA0147.1;0.000461844,MA0148.1;0.338213,MA0149.1;1.86637,MA0062.2;2.32794e-07,MA0035.2;0.362694,MA0039.2;9.00682e-14,MA0138.2;0.0157017,MA0002.2;0.0139997,MA0137.2;0.0934672,MA0104.2;0.000426209,MA0047.2;0.691662,MA0112.2;9.99864e-08,MA0065.2;1.65583e-06,MA0150.1;0.291299,MA0151.1;0,MA0152.1;0.245957,MA0153.1;0.796407,MA0154.1;0.0341189,MA0155.1;4.43543e-05,MA0156.1;0.0414293,MA0157.1;0.698797,MA0158.1;0,MA0159.1;0.000829049,MA0160.1;0.154276,MA0161.1;0,MA0162.1;5.05367e-06,MA0163.1;0.000132239,MA0164.1;1.3916,MA0080.2;0.176991,MA0018.2;1.26667e-05,MA0099.2;0.24732,MA0079.2;0,MA0102.2;0.0560451,MA0258.1;0.0509692,MA0259.1;0.148396,MA0442.1;0
}}
}}

Revision as of 18:06, 22 January 2013


Full id: C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms



Phase1 CAGE Peaks

Hg19::chr10:104913128..104913151,-p6@NT5C2
Hg19::chr10:104913215..104913221,-p16@NT5C2
Hg19::chr10:104913332..104913343,-p8@NT5C2
Hg19::chr10:16886691..16886704,+p@chr10:16886691..16886704
+
Hg19::chr10:16886880..16886897,+p@chr10:16886880..16886897
+
Hg19::chr10:16890716..16890720,+p@chr10:16890716..16890720
+
Hg19::chr10:33242544..33242566,-p@chr10:33242544..33242566
-
Hg19::chr10:33244066..33244083,-p@chr10:33244066..33244083
-
Hg19::chr10:33244262..33244283,-p@chr10:33244262..33244283
-
Hg19::chr10:33244302..33244305,-p@chr10:33244302..33244305
-
Hg19::chr10:33244345..33244348,-p@chr10:33244345..33244348
-
Hg19::chr10:54786954..54786965,-p@chr10:54786954..54786965
-
Hg19::chr10:54789777..54789792,-p@chr10:54789777..54789792
-
Hg19::chr10:54789824..54789835,-p@chr10:54789824..54789835
-
Hg19::chr10:54789856..54789877,-p@chr10:54789856..54789877
-
Hg19::chr10:63699927..63699935,+p@chr10:63699927..63699935
+
Hg19::chr10:63699998..63700013,+p@chr10:63699998..63700013
+
Hg19::chr10:63700017..63700022,+p@chr10:63700017..63700022
+
Hg19::chr10:63700043..63700053,+p@chr10:63700043..63700053
+
Hg19::chr10:63700076..63700086,+p@chr10:63700076..63700086
+
Hg19::chr10:65696234..65696259,+p@chr10:65696234..65696259
+
Hg19::chr11:104034662..104034710,-p7@PDGFD
Hg19::chr11:104212782..104212792,+p@chr11:104212782..104212792
+
Hg19::chr11:30105969..30105977,-p1@ENST00000527819
Hg19::chr11:30166055..30166059,-p@chr11:30166055..30166059
-
Hg19::chr11:30252646..30252648,+p@chr11:30252646..30252648
+
Hg19::chr11:30253410..30253431,+p2@FSHB
Hg19::chr11:30257128..30257133,-p@chr11:30257128..30257133
-
Hg19::chr11:30605486..30605499,-p@chr11:30605486..30605499
-
Hg19::chr11:67210740..67210781,-p@chr11:67210740..67210781
-
Hg19::chr11:86649508..86649546,-p@chr11:86649508..86649546
-
Hg19::chr11:86649555..86649566,-p@chr11:86649555..86649566
-
Hg19::chr11:94964565..94964589,-p3@SESN3
Hg19::chr12:108955070..108955084,-p16@SART3
Hg19::chr12:46660265..46660305,-p11@SLC38A1
Hg19::chr12:46660320..46660343,-p16@SLC38A1
Hg19::chr12:46660412..46660420,-p38@SLC38A1
Hg19::chr12:46781329..46781343,+p1@LOC100288798
Hg19::chr12:46884845..46884851,+p@chr12:46884845..46884851
+
Hg19::chr12:65386452..65386492,-p@chr12:65386452..65386492
-
Hg19::chr12:65514968..65514979,-p6@WIF1
Hg19::chr12:65515116..65515137,-p5@WIF1
Hg19::chr12:65515253..65515260,-p10@WIF1
Hg19::chr12:65515269..65515306,-p4@WIF1
Hg19::chr12:65515309..65515318,-p7@WIF1
Hg19::chr12:65515322..65515326,-p8@WIF1
Hg19::chr12:65515334..65515362,-p3@WIF1
Hg19::chr12:65673063..65673073,+p@chr12:65673063..65673073
+
Hg19::chr12:70351934..70351939,+p@chr12:70351934..70351939
+
Hg19::chr12:70351971..70351975,+p@chr12:70351971..70351975
+
Hg19::chr12:70636861..70636884,+p5@CNOT2
Hg19::chr12:70636886..70636895,+p17@CNOT2
Hg19::chr12:70636933..70636940,+p28@CNOT2
Hg19::chr12:70637542..70637556,+p6@CNOT2
Hg19::chr12:70637559..70637570,+p10@CNOT2
Hg19::chr12:70760601..70760621,+p7@KCNMB4
Hg19::chr12:71029609..71029628,-p@chr12:71029609..71029628
-
Hg19::chr12:71029831..71029842,-p@chr12:71029831..71029842
-
Hg19::chr12:71031281..71031292,-p12@PTPRB
Hg19::chr12:71031310..71031321,-p14@PTPRB
Hg19::chr12:71031325..71031332,-p19@PTPRB
Hg19::chr12:71031372..71031377,-p25@PTPRB
Hg19::chr12:79920595..79920605,-p@chr12:79920595..79920605
-
Hg19::chr12:79920639..79920642,-p@chr12:79920639..79920642
-
Hg19::chr12:80658848..80658862,+p@chr12:80658848..80658862
+
Hg19::chr12:80658863..80658874,+p@chr12:80658863..80658874
+
Hg19::chr12:80818234..80818245,+p@chr12:80818234..80818245
+
Hg19::chr12:80818259..80818266,+p@chr12:80818259..80818266
+
Hg19::chr12:80837949..80837979,+p4@PTPRQ
Hg19::chr12:89917192..89917200,-p@chr12:89917192..89917200
-
Hg19::chr12:89917653..89917666,-p@chr12:89917653..89917666
-
Hg19::chr12:89918332..89918341,-p3@GALNT4
Hg19::chr12:95941674..95941679,+p@chr12:95941674..95941679
+
Hg19::chr13:22245668..22245676,+p7@FGF9
Hg19::chr13:22246239..22246252,+p1@AB590813
Hg19::chr13:23027835..23027846,+p@chr13:23027835..23027846
+
Hg19::chr13:23027882..23027888,+p@chr13:23027882..23027888
+
Hg19::chr13:23167229..23167234,+p@chr13:23167229..23167234
+
Hg19::chr13:23167392..23167427,+p@chr13:23167392..23167427
+
Hg19::chr13:23167683..23167699,-p@chr13:23167683..23167699
-
Hg19::chr13:23169005..23169009,+p@chr13:23169005..23169009
+
Hg19::chr13:23368290..23368299,+p@chr13:23368290..23368299
+
Hg19::chr13:23368370..23368374,+p@chr13:23368370..23368374
+
Hg19::chr13:23733478..23733489,-p@chr13:23733478..23733489
-
Hg19::chr13:23733607..23733611,-p@chr13:23733607..23733611
-
Hg19::chr13:23733790..23733815,-p@chr13:23733790..23733815
-
Hg19::chr13:23734149..23734161,+p@chr13:23734149..23734161
+
Hg19::chr13:23734194..23734204,+p@chr13:23734194..23734204
+
Hg19::chr13:23734241..23734249,+p@chr13:23734241..23734249
+
Hg19::chr13:23734279..23734283,+p@chr13:23734279..23734283
+
Hg19::chr13:23734308..23734318,+p@chr13:23734308..23734318
+
Hg19::chr14:102552762..102552776,-p21@HSP90AA1
Hg19::chr14:102771343..102771364,-p7@MOK
Hg19::chr14:68507866..68507880,+p@chr14:68507866..68507880
+
Hg19::chr14:75083481..75083509,-p2@ENST00000555313
Hg19::chr14:75083583..75083589,-p3@ENST00000555313
Hg19::chr14:75083647..75083654,-p5@ENST00000555313
Hg19::chr14:83319766..83319776,-p@chr14:83319766..83319776
-
Hg19::chr14:83320227..83320266,-p@chr14:83320227..83320266
-
Hg19::chr14:87689429..87689432,-p@chr14:87689429..87689432
-
Hg19::chr14:87700413..87700419,+p@chr14:87700413..87700419
+
Hg19::chr14:87815571..87815575,+p@chr14:87815571..87815575
+
Hg19::chr14:88034381..88034386,-p@chr14:88034381..88034386
-
Hg19::chr14:88157198..88157203,-p@chr14:88157198..88157203
-
Hg19::chr14:88177135..88177139,-p@chr14:88177135..88177139
-
Hg19::chr14:88220703..88220709,-p@chr14:88220703..88220709
-
Hg19::chr14:88282738..88282741,-p1@ENST00000554519
Hg19::chr14:88322509..88322516,-p@chr14:88322509..88322516
-
Hg19::chr14:88322648..88322655,-p@chr14:88322648..88322655
-
Hg19::chr14:88338702..88338713,-p1@ENST00000554305
Hg19::chr15:56331027..56331040,-p@chr15:56331027..56331040
-
Hg19::chr15:95751475..95751482,+p@chr15:95751475..95751482
+
Hg19::chr15:96181408..96181419,-p@chr15:96181408..96181419
-
Hg19::chr15:96181421..96181428,-p@chr15:96181421..96181428
-
Hg19::chr15:96181433..96181441,-p@chr15:96181433..96181441
-
Hg19::chr16:19728636..19728681,+p5@IQCK
Hg19::chr16:19729776..19729796,-p3@C16orf88
Hg19::chr16:19730065..19730073,-p@chr16:19730065..19730073
-
Hg19::chr16:19730122..19730136,-p@chr16:19730122..19730136
-
Hg19::chr16:19897455..19897471,-p@chr16:19897455..19897471
-
Hg19::chr16:29150851..29150887,-p@chr16:29150851..29150887
-
Hg19::chr16:52581957..52581960,-p8@TOX3
Hg19::chr16:74112544..74112566,-p@chr16:74112544..74112566
-
Hg19::chr16:85028102..85028115,-p@chr16:85028102..85028115
-
Hg19::chr17:46178219..46178262,-p5@CBX1
Hg19::chr17:57785120..57785162,+p@chr17:57785120..57785162
+
Hg19::chr17:57785324..57785365,+p@chr17:57785324..57785365
+
Hg19::chr18:12255308..12255318,-p@chr18:12255308..12255318
-
Hg19::chr18:12255336..12255356,-p@chr18:12255336..12255356
-
Hg19::chr18:22080172..22080183,+p@chr18:22080172..22080183
+
Hg19::chr18:22251659..22251675,-p@chr18:22251659..22251675
-
Hg19::chr18:22251681..22251685,-p@chr18:22251681..22251685
-
Hg19::chr18:22251696..22251702,-p@chr18:22251696..22251702
-
Hg19::chr18:22253534..22253542,+p@chr18:22253534..22253542
+
Hg19::chr18:22253551..22253562,+p@chr18:22253551..22253562
+
Hg19::chr18:22253588..22253590,+p@chr18:22253588..22253590
+
Hg19::chr18:22254259..22254267,+p@chr18:22254259..22254267
+
Hg19::chr18:22254321..22254328,+p@chr18:22254321..22254328
+
Hg19::chr18:22254334..22254352,+p@chr18:22254334..22254352
+
Hg19::chr18:52668092..52668107,-p@chr18:52668092..52668107
-
Hg19::chr18:61186337..61186363,+p@chr18:61186337..61186363
+
Hg19::chr18:61442864..61442873,+p15@SERPINB7
Hg19::chr18:61442875..61442885,+p12@SERPINB7
Hg19::chr18:61442908..61442919,+p10@SERPINB7
Hg19::chr18:61445190..61445203,+p11@SERPINB7
Hg19::chr18:61445205..61445227,+p8@SERPINB7
Hg19::chr18:61495497..61495512,+p@chr18:61495497..61495512
+
Hg19::chr18:61495529..61495546,+p@chr18:61495529..61495546
+
Hg19::chr18:61506836..61506840,+p@chr18:61506836..61506840
+
Hg19::chr18:74535888..74535894,-p@chr18:74535888..74535894
-
Hg19::chr18:74535969..74535980,-p@chr18:74535969..74535980
-
Hg19::chr18:74961699..74961708,+p5@GALR1
Hg19::chr18:74961799..74961809,+p3@GALR1
Hg19::chr18:74961811..74961822,+p2@GALR1
Hg19::chr19:15442274..15442284,+p@chr19:15442274..15442284
+
Hg19::chr19:17952539..17952569,-p@chr19:17952539..17952569
-
Hg19::chr19:41281630..41281644,+p6@RAB4B
Hg19::chr19:49147890..49147907,-p12@CA11
Hg19::chr19:55657948..55657959,-p@chr19:55657948..55657959
-
Hg19::chr19:56047661..56047668,-p4@SBK2
Hg19::chr19:56047669..56047674,-p7@SBK2
Hg19::chr19:56048460..56048482,-p1@SBK2
Hg19::chr19:56048484..56048487,-p3@SBK2
Hg19::chr19:56048494..56048519,-p2@SBK2
Hg19::chr19:56091451..56091469,-p@chr19:56091451..56091469
-
Hg19::chr19:56091499..56091517,-p@chr19:56091499..56091517
-
Hg19::chr19:56091526..56091565,-p@chr19:56091526..56091565
-
Hg19::chr19:56091568..56091589,-p@chr19:56091568..56091589
-
Hg19::chr1:112916133..112916138,-p@chr1:112916133..112916138
-
Hg19::chr1:112939121..112939137,+p5@CTTNBP2NL
Hg19::chr1:113250450..113250457,-p18@RHOC
Hg19::chr1:145457662..145457668,-p@chr1:145457662..145457668
-
Hg19::chr1:145471703..145471706,+p@chr1:145471703..145471706
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Hg19::chr1:145472013..145472027,+p@chr1:145472013..145472027
+
Hg19::chr1:145473286..145473295,+p5@AB464458
Hg19::chr1:145473297..145473306,+p7@AB464458
Hg19::chr1:153650470..153650481,+p@chr1:153650470..153650481
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Hg19::chr1:154941364..154941368,-p29@SHC1
Hg19::chr1:154941430..154941469,-p19@SHC1
Hg19::chr1:154942088..154942097,-p@chr1:154942088..154942097
-
Hg19::chr1:154942133..154942148,-p@chr1:154942133..154942148
-
Hg19::chr1:154942206..154942211,-p@chr1:154942206..154942211
-
Hg19::chr1:154942216..154942223,-p@chr1:154942216..154942223
-
Hg19::chr1:154942376..154942386,-p@chr1:154942376..154942386
-
Hg19::chr1:154942390..154942401,-p@chr1:154942390..154942401
-
Hg19::chr1:154942415..154942436,-p@chr1:154942415..154942436
-
Hg19::chr1:154942454..154942470,-p@chr1:154942454..154942470
-
Hg19::chr1:154942473..154942496,-p@chr1:154942473..154942496
-
Hg19::chr1:156470861..156470868,-p18@MEF2D
Hg19::chr1:158985633..158985641,+p38@IFI16
Hg19::chr1:158985667..158985675,+p31@IFI16
Hg19::chr1:158989981..158989988,+p@chr1:158989981..158989988
+
Hg19::chr1:158990003..158990014,+p@chr1:158990003..158990014
+
Hg19::chr1:158990027..158990032,+p@chr1:158990027..158990032
+
Hg19::chr1:172009977..172009985,+p@chr1:172009977..172009985
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Hg19::chr1:172113564..172113575,-p2@DNM3OS
Hg19::chr1:172113969..172113980,-p3@DNM3OS
Hg19::chr1:172145683..172145699,+p@chr1:172145683..172145699
+
Hg19::chr1:172234518..172234527,+p@chr1:172234518..172234527
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Hg19::chr1:192407879..192407891,-p@chr1:192407879..192407891
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Hg19::chr1:192407901..192407907,-p@chr1:192407901..192407907
-
Hg19::chr1:192407944..192407958,-p@chr1:192407944..192407958
-
Hg19::chr1:192408018..192408032,-p@chr1:192408018..192408032
-
Hg19::chr1:192444852..192444861,+p@chr1:192444852..192444861
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Hg19::chr1:197871854..197871858,+p2@C1orf53
Hg19::chr1:197873492..197873502,-p@chr1:197873492..197873502
-
Hg19::chr1:197886421..197886432,+p2@LHX9
Hg19::chr1:197886646..197886657,+p5@LHX9
Hg19::chr1:197886665..197886732,+p3@LHX9
Hg19::chr1:197886772..197886790,+p4@LHX9
Hg19::chr1:197886803..197886812,+p7@LHX9
Hg19::chr1:197889198..197889204,+p@chr1:197889198..197889204
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Hg19::chr1:197889533..197889548,+p@chr1:197889533..197889548
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Hg19::chr1:197889977..197890013,+p@chr1:197889977..197890013
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Hg19::chr1:197890538..197890548,+p@chr1:197890538..197890548
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Hg19::chr1:197896790..197896802,+p16@LHX9
Hg19::chr1:198595844..198595854,+p@chr1:198595844..198595854
+
Hg19::chr1:198595872..198595878,+p@chr1:198595872..198595878
+
Hg19::chr1:198595896..198595910,+p@chr1:198595896..198595910
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Hg19::chr1:228783266..228783269,-p@chr1:228783266..228783269
-
Hg19::chr1:228783293..228783309,-p@chr1:228783293..228783309
-
Hg19::chr1:228806586..228806591,+p@chr1:228806586..228806591
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Hg19::chr1:238018887..238018895,-p@chr1:238018887..238018895
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Hg19::chr1:43637641..43637648,-p16@EBNA1BP2
Hg19::chr1:43637810..43637821,-p10@EBNA1BP2
Hg19::chr1:43637850..43637863,-p4@EBNA1BP2
Hg19::chr1:63153915..63153926,+p3@ENST00000453229
Hg19::chr1:94800795..94800805,+p@chr1:94800795..94800805
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Hg19::chr20:22564411..22564420,-p@chr20:22564411..22564420
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Hg19::chr20:36848135..36848142,-p@chr20:36848135..36848142
-
Hg19::chr20:51589107..51589120,+p9@TSHZ2
Hg19::chr20:51589133..51589159,+p2@TSHZ2
Hg19::chr20:51589167..51589178,+p14@TSHZ2
Hg19::chr20:51589732..51589769,+p3@TSHZ2
Hg19::chr20:51589792..51589811,+p7@TSHZ2
Hg19::chr20:52214239..52214244,-p@chr20:52214239..52214244
-
Hg19::chr20:52556915..52556930,+p3@ENST00000450473
Hg19::chr21:15755082..15755099,+p@chr21:15755082..15755099
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Hg19::chr21:17357327..17357329,-p@chr21:17357327..17357329
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Hg19::chr21:26706329..26706335,-p1@ENST00000409758
Hg19::chr21:26713474..26713508,-p@chr21:26713474..26713508
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Hg19::chr21:26796921..26796933,-p8@LINC00158
Hg19::chr21:38071760..38071776,+p5@SIM2
Hg19::chr21:38071778..38071790,+p9@SIM2
Hg19::chr21:38309134..38309135,-p@chr21:38309134..38309135
-
Hg19::chr21:38309245..38309252,-p@chr21:38309245..38309252
-
Hg19::chr21:38378994..38379025,+p1@DSCR6
Hg19::chr21:42219223..42219235,-p9@DSCAM
Hg19::chr22:36424432..36424454,-p22@RBFOX2
Hg19::chr22:36424458..36424486,-p12@RBFOX2
Hg19::chr2:101223582..101223629,+p1@ENST00000424342
Hg19::chr2:101437588..101437619,+p10@NPAS2
Hg19::chr2:175614951..175614956,-p@chr2:175614951..175614956
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Hg19::chr2:175629305..175629312,-p8@CHRNA1
Hg19::chr2:175629357..175629367,-p6@CHRNA1
Hg19::chr2:188378374..188378387,-p3@TFPI
Hg19::chr2:188420455..188420469,+p@chr2:188420455..188420469
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Hg19::chr2:188420470..188420480,+p@chr2:188420470..188420480
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Hg19::chr2:188420652..188420665,+p@chr2:188420652..188420665
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Hg19::chr2:188432107..188432111,+p@chr2:188432107..188432111
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Hg19::chr2:188463877..188463880,+p@chr2:188463877..188463880
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Hg19::chr2:190023542..190023552,-p@chr2:190023542..190023552
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Hg19::chr2:190043905..190043909,-p@chr2:190043905..190043909
-
Hg19::chr2:190149202..190149208,-p@chr2:190149202..190149208
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Hg19::chr2:206927652..206927658,-p@chr2:206927652..206927658
-
Hg19::chr2:206927691..206927699,-p@chr2:206927691..206927699
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Hg19::chr2:27806224..27806236,+p5@ZNF512
Hg19::chr2:50758449..50758463,-p@chr2:50758449..50758463
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Hg19::chr2:50758563..50758601,-p@chr2:50758563..50758601
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Hg19::chr2:53364129..53364132,-p@chr2:53364129..53364132
-
Hg19::chr2:53436098..53436110,-p@chr2:53436098..53436110
-
Hg19::chr2:53436150..53436154,-p@chr2:53436150..53436154
-
Hg19::chr2:53436213..53436248,-p@chr2:53436213..53436248
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Hg19::chr2:74779917..74779926,-p26@LOXL3
Hg19::chr2:74780643..74780673,-p30@LOXL3
Hg19::chr3:106921055..106921063,-p@chr3:106921055..106921063
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Hg19::chr3:106921109..106921119,-p@chr3:106921109..106921119
-
Hg19::chr3:106928585..106928598,-p@chr3:106928585..106928598
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Hg19::chr3:1134339..1134350,+p5@CNTN6
Hg19::chr3:1134366..1134376,+p8@CNTN6
Hg19::chr3:1134400..1134417,+p3@CNTN6
Hg19::chr3:127392292..127392302,+p2@ABTB1
Hg19::chr3:127441406..127441423,-p26@MGLL
Hg19::chr3:127441426..127441438,-p37@MGLL
Hg19::chr3:127441452..127441489,-p20@MGLL
Hg19::chr3:127441501..127441504,-p59@MGLL
Hg19::chr3:127441545..127441550,-p58@MGLL
Hg19::chr3:141106549..141106561,+p47@ZBTB38
Hg19::chr3:141106608..141106618,+p61@ZBTB38
Hg19::chr3:157206062..157206073,-p@chr3:157206062..157206073
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Hg19::chr3:157206082..157206087,-p@chr3:157206082..157206087
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Hg19::chr3:157206090..157206092,-p@chr3:157206090..157206092
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Hg19::chr3:157206111..157206139,-p@chr3:157206111..157206139
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Hg19::chr3:157221979..157222025,-p@chr3:157221979..157222025
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Hg19::chr3:157230506..157230511,+p@chr3:157230506..157230511
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Hg19::chr3:157230582..157230593,+p@chr3:157230582..157230593
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Hg19::chr3:157230599..157230604,+p@chr3:157230599..157230604
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Hg19::chr3:157230635..157230643,+p@chr3:157230635..157230643
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Hg19::chr3:157231406..157231414,-p@chr3:157231406..157231414
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Hg19::chr3:1577545..1577547,-p@chr3:1577545..1577547
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Hg19::chr3:1577559..1577577,-p@chr3:1577559..1577577
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Hg19::chr3:1577586..1577600,-p@chr3:1577586..1577600
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Hg19::chr3:1577628..1577634,-p@chr3:1577628..1577634
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Hg19::chr3:163194047..163194081,-p@chr3:163194047..163194081
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Hg19::chr3:170537826..170537835,+p@chr3:170537826..170537835
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Hg19::chr3:177555440..177555446,-p@chr3:177555440..177555446
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Hg19::chr3:185826157..185826169,-p@chr3:185826157..185826169
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Hg19::chr3:190917023..190917037,+p1@OSTN
Hg19::chr3:196296715..196296737,-p@chr3:196296715..196296737
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Hg19::chr3:2139856..2139863,+p@chr3:2139856..2139863
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Hg19::chr3:2139970..2140019,+p17@CNTN4
Hg19::chr3:2140149..2140157,+p25@CNTN4
Hg19::chr3:2140207..2140208,+p34@CNTN4
Hg19::chr3:2140234..2140235,+p36@CNTN4
Hg19::chr3:2140400..2140411,+p14@CNTN4
Hg19::chr3:2141746..2141758,-p@chr3:2141746..2141758
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Hg19::chr3:2141759..2141771,-p@chr3:2141759..2141771
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Hg19::chr3:2141775..2141783,-p@chr3:2141775..2141783
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Hg19::chr3:2141785..2141802,-p@chr3:2141785..2141802
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Hg19::chr3:2141813..2141822,-p@chr3:2141813..2141822
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Hg19::chr3:2141827..2141844,-p@chr3:2141827..2141844
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Hg19::chr3:2141851..2141858,-p@chr3:2141851..2141858
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Hg19::chr3:2141862..2141887,-p@chr3:2141862..2141887
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Hg19::chr3:2141888..2141892,-p@chr3:2141888..2141892
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Hg19::chr3:2141949..2141956,+p21@CNTN4
Hg19::chr3:2141982..2141990,+p16@CNTN4
Hg19::chr3:2141993..2142006,+p6@CNTN4
Hg19::chr3:30442082..30442087,-p@chr3:30442082..30442087
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Hg19::chr3:30570717..30570723,-p@chr3:30570717..30570723
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Hg19::chr3:99508248..99508255,-p@chr3:99508248..99508255
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Hg19::chr3:99508258..99508268,-p@chr3:99508258..99508268
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Hg19::chr3:99508295..99508310,-p@chr3:99508295..99508310
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Hg19::chr3:99508318..99508344,-p@chr3:99508318..99508344
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Hg19::chr3:99542688..99542701,-p1@AB593151
Hg19::chr3:99563688..99563698,+p@chr3:99563688..99563698
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Hg19::chr3:99680705..99680734,+p@chr3:99680705..99680734
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Hg19::chr3:99984127..99984138,+p@chr3:99984127..99984138
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Hg19::chr4:139113344..139113355,-p@chr4:139113344..139113355
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Hg19::chr4:139113357..139113376,-p@chr4:139113357..139113376
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Hg19::chr4:139817573..139817580,-p@chr4:139817573..139817580
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Hg19::chr4:139817600..139817609,-p@chr4:139817600..139817609
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Hg19::chr4:145101707..145101712,+p@chr4:145101707..145101712
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Hg19::chr4:145101718..145101735,+p@chr4:145101718..145101735
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Hg19::chr4:145101740..145101751,+p@chr4:145101740..145101751
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Hg19::chr4:145124273..145124279,+p@chr4:145124273..145124279
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Hg19::chr4:147560042..147560046,+p1@POU4F2
Hg19::chr4:148538701..148538717,+p7@TMEM184C
Hg19::chr4:169935453..169935460,-p@chr4:169935453..169935460
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Hg19::chr4:169935479..169935481,-p@chr4:169935479..169935481
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Hg19::chr4:169935485..169935488,-p@chr4:169935485..169935488
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Hg19::chr4:66465165..66465176,-p@chr4:66465165..66465176
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Hg19::chr4:66535838..66535852,-p21@EPHA5
Hg19::chr4:66536143..66536160,-p3@EPHA5
Hg19::chr4:66536310..66536351,-p6@EPHA5
Hg19::chr4:66536368..66536382,-p12@EPHA5
Hg19::chr4:66536407..66536419,-p9@EPHA5
Hg19::chr4:72885984..72885997,-p@chr4:72885984..72885997
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Hg19::chr4:72897846..72897853,+p7@NPFFR2
Hg19::chr4:74123965..74123982,+p@chr4:74123965..74123982
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Hg19::chr5:109026049..109026067,+p13@MAN2A1
Hg19::chr5:109694595..109694599,+p@chr5:109694595..109694599
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Hg19::chr5:125691823..125691832,-p@chr5:125691823..125691832
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Hg19::chr5:127873357..127873366,-p17@FBN2
Hg19::chr5:128083909..128083918,+p@chr5:128083909..128083918
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Hg19::chr5:128083931..128083952,+p@chr5:128083931..128083952
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Hg19::chr5:140743838..140743852,+p4@PCDHGA5
Hg19::chr5:140743859..140743876,+p2@PCDHGA5
Hg19::chr5:14441081..14441113,+p8@TRIO
Hg19::chr5:33229308..33229311,-p@chr5:33229308..33229311
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Hg19::chr5:33361438..33361453,-p@chr5:33361438..33361453
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Hg19::chr5:39548606..39548614,-p@chr5:39548606..39548614
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Hg19::chr5:44808777..44808780,-p1@ENST00000508123
Hg19::chr5:44808821..44808900,-p1@ENST00000503179
p1@ENST00000503452
p1@ENST00000505302
p1@ENST00000505401
p1@ENST00000505637
p1@ENST00000508945
p1@ENST00000514597
Hg19::chr5:44809522..44809538,-p@chr5:44809522..44809538
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Hg19::chr5:44809742..44809753,+p9@MRPS30
Hg19::chr5:44809814..44809828,+p7@MRPS30
Hg19::chr5:44810619..44810654,+p@chr5:44810619..44810654
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Hg19::chr6:109702786..109702795,-p21@CD164
Hg19::chr6:132455490..132455504,+p1@ENST00000443303
Hg19::chr6:132455526..132455539,+p2@ENST00000443303
Hg19::chr6:142987388..142987398,-p@chr6:142987388..142987398
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Hg19::chr6:142993137..142993142,+p@chr6:142993137..142993142
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Hg19::chr6:143857718..143857750,+p12@PHACTR2
Hg19::chr6:143857883..143857900,+p3@PHACTR2
Hg19::chr6:143858194..143858197,+p@chr6:143858194..143858197
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Hg19::chr6:150735014..150735021,-p@chr6:150735014..150735021
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Hg19::chr6:150735319..150735330,+p@chr6:150735319..150735330
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Hg19::chr6:150735340..150735361,+p@chr6:150735340..150735361
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Hg19::chr6:150740842..150740854,+p@chr6:150740842..150740854
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Hg19::chr6:152589245..152589256,-p53@SYNE1
Hg19::chr6:152589270..152589286,-p24@SYNE1
Hg19::chr6:152589291..152589303,-p38@SYNE1
Hg19::chr6:152589315..152589320,-p72@SYNE1
Hg19::chr6:152589345..152589353,-p63@SYNE1
Hg19::chr6:152589366..152589388,-p23@SYNE1
Hg19::chr6:152589396..152589401,-p68@SYNE1
Hg19::chr6:152589452..152589462,-p43@SYNE1
Hg19::chr6:152589466..152589487,-p26@SYNE1
Hg19::chr6:152590052..152590068,-p@chr6:152590052..152590068
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Hg19::chr6:152590257..152590288,-p@chr6:152590257..152590288
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Hg19::chr6:152590379..152590412,-p@chr6:152590379..152590412
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Hg19::chr6:152592460..152592465,-p@chr6:152592460..152592465
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Hg19::chr6:152792772..152792787,-p@chr6:152792772..152792787
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Hg19::chr6:152792795..152792816,-p@chr6:152792795..152792816
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Hg19::chr6:152792957..152792960,-p@chr6:152792957..152792960
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Hg19::chr6:25166573..25166597,-p9@CMAHP
Hg19::chr6:96913362..96913393,-p@chr6:96913362..96913393
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Hg19::chr6:96971077..96971088,+p@chr6:96971077..96971088
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Hg19::chr7:100807143..100807161,+p@chr7:100807143..100807161
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Hg19::chr7:107642348..107642390,-p11@LAMB1
Hg19::chr7:120629124..120629138,+p34@C7orf58
Hg19::chr7:120629150..120629161,+p42@C7orf58
Hg19::chr7:120702918..120702924,+p5@C7orf58
Hg19::chr7:141438347..141438356,+p4@SSBP1
Hg19::chr7:15726064..15726103,-p8@MEOX2
Hg19::chr7:15726176..15726191,-p3@MEOX2
Hg19::chr7:15726206..15726217,-p6@MEOX2
Hg19::chr7:15726296..15726315,-p1@MEOX2
Hg19::chr7:16116627..16116633,-p@chr7:16116627..16116633
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Hg19::chr7:18439468..18439477,+p@chr7:18439468..18439477
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Hg19::chr7:18439510..18439521,+p@chr7:18439510..18439521
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Hg19::chr7:18439523..18439524,+p@chr7:18439523..18439524
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Hg19::chr7:18535562..18535606,+p17@HDAC9
Hg19::chr7:18535614..18535625,+p24@HDAC9
Hg19::chr7:18535633..18535643,+p30@HDAC9
Hg19::chr7:18536090..18536130,+p33@HDAC9
Hg19::chr7:32982032..32982051,-p8@RP9P
Hg19::chr7:79999046..79999051,+p41@CD36
Hg19::chr7:80000561..80000582,+p@chr7:80000561..80000582
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Hg19::chr7:80000596..80000626,+p@chr7:80000596..80000626
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Hg19::chr7:80080929..80080934,+p@chr7:80080929..80080934
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Hg19::chr7:80840847..80840870,-p@chr7:80840847..80840870
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Hg19::chr7:80840886..80840915,-p@chr7:80840886..80840915
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Hg19::chr7:94540075..94540082,+p21@PPP1R9A
Hg19::chr8:107074411..107074421,+p@chr8:107074411..107074421
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Hg19::chr8:107074457..107074458,+p@chr8:107074457..107074458
+
Hg19::chr8:107669907..107669913,+p20@OXR1
Hg19::chr8:114449616..114449629,-p3@CSMD3
Hg19::chr8:2585988..2585994,-p1@ENST00000523971
Hg19::chr8:31497452..31497463,+p20@NRG1
Hg19::chr8:40275958..40275976,+p@chr8:40275958..40275976
+
Hg19::chr8:42396185..42396196,-p25@SLC20A2
Hg19::chr8:6455925..6455973,-p@chr8:6455925..6455973
-
Hg19::chr8:8244121..8244132,-p9@SGK223
Hg19::chr8:8244141..8244155,-p8@SGK223
Hg19::chr9:12848028..12848033,-p@chr9:12848028..12848033
-
Hg19::chr9:13005000..13005036,-p@chr9:13005000..13005036
-
Hg19::chr9:13006722..13006729,-p@chr9:13006722..13006729
-
Hg19::chr9:136294154..136294202,+p@chr9:136294154..136294202
+
Hg19::chr9:17906621..17906643,+p@chr9:17906621..17906643
+
Hg19::chr9:17906654..17906668,+p@chr9:17906654..17906668
+
Hg19::chr9:18504821..18504825,+p@chr9:18504821..18504825
+
Hg19::chr9:18993581..18993586,-p@chr9:18993581..18993586
-
Hg19::chr9:3742840..3742869,+p@chr9:3742840..3742869
+
Hg19::chr9:79318485..79318508,+p@chr9:79318485..79318508
+
Hg19::chr9:79320602..79320607,-p33@PRUNE2
Hg19::chr9:79320626..79320636,-p23@PRUNE2
Hg19::chr9:79634044..79634053,-p@chr9:79634044..79634053
-
Hg19::chrX:135063432..135063444,-p@chrX:135063432..135063444
-
Hg19::chrX:135333722..135333743,-p2@MAP7D3
Hg19::chrX:135338270..135338275,-p@chrX:135338270..135338275
-
Hg19::chrX:135338329..135338337,-p@chrX:135338329..135338337
-
Hg19::chrX:135338345..135338354,-p@chrX:135338345..135338354
-
Hg19::chrX:135338361..135338370,-p@chrX:135338361..135338370
-
Hg19::chrX:135338397..135338402,-p@chrX:135338397..135338402
-
Hg19::chrX:135342362..135342373,+p@chrX:135342362..135342373
+
Hg19::chrX:135570066..135570073,+p3@BRS3
Hg19::chrX:135570098..135570113,+p1@BRS3
Hg19::chrX:135570151..135570192,+p2@BRS3
Hg19::chrX:135579783..135579812,+p2@HTATSF1
Hg19::chrX:135579827..135579838,+p9@HTATSF1
Hg19::chrX:33229431..33229448,-p20@DMD
Hg19::chrX:33229509..33229522,-p15@DMD
Hg19::chrX:33357577..33357588,-p21@DMD
Hg19::chrX:47077680..47077723,+p2@CDK16
Hg19::chrX:47077755..47077769,+p5@CDK16
Hg19::chrX:47341928..47342010,-p2@ZNF41
Hg19::chrX:591202..591211,-p@chrX:591202..591211
-
Hg19::chrX:591524..591527,+p1@SHOX
Hg19::chrX:606157..606161,+p@chrX:606157..606161
+
Hg19::chrX:86773106..86773119,+p5@KLHL4


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0032502developmental process1.09100664697505e-13
GO:0032501multicellular organismal process4.45904962569228e-11
GO:0007275multicellular organismal development3.47214716850796e-09
GO:0048856anatomical structure development4.62125968221429e-07
GO:0065007biological regulation6.2823496025851e-07
GO:0048731system development2.67773238184643e-06
GO:0048513organ development6.12784147594054e-05
GO:0050789regulation of biological process8.58829632794838e-05
GO:0050794regulation of cellular process0.000216011211722171
GO:0005886plasma membrane0.000856511431827884
GO:0048869cellular developmental process0.001126820399881
GO:0030154cell differentiation0.001126820399881
GO:0044464cell part0.00201353519325747
GO:0006366transcription from RNA polymerase II promoter0.00302836234527874
GO:0005624membrane fraction0.00444605892563611
GO:0000267cell fraction0.00496552476370926
GO:0007399nervous system development0.00543314345098537
GO:0009790embryonic development0.00584583574569698
GO:0008188neuropeptide receptor activity0.00589413314273301
GO:0042923neuropeptide binding0.00595581333628997
GO:0030594neurotransmitter receptor activity0.00829124062051489
GO:0042165neurotransmitter binding0.00864618647898194
GO:0006357regulation of transcription from RNA polymerase II promoter0.00864618647898194
GO:0048518positive regulation of biological process0.0111561806845732
GO:0007517muscle development0.0142835205673985
GO:0005515protein binding0.0142835205673985
GO:0045449regulation of transcription0.0162615220682648
GO:0006355regulation of transcription, DNA-dependent0.0171668228962938
GO:0050679positive regulation of epithelial cell proliferation0.0178534419604711
GO:0019219regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process0.0186416492512965
GO:0008584male gonad development0.0186416492512965
GO:0048522positive regulation of cellular process0.019653068386465
GO:0006351transcription, DNA-dependent0.0204062398746496
GO:0008283cell proliferation0.0204062398746496
GO:0032774RNA biosynthetic process0.0204062398746496
GO:0016010dystrophin-associated glycoprotein complex0.0215411414047579
GO:0003700transcription factor activity0.0215411414047579
GO:0006350transcription0.0219594121522814
GO:0019222regulation of metabolic process0.0228104234583783
GO:0010468regulation of gene expression0.0235792095927749
GO:0001649osteoblast differentiation0.024531124103968
GO:0046546development of primary male sexual characteristics0.0259081324404001
GO:0009880embryonic pattern specification0.0278004416641354
GO:0044424intracellular part0.0278004416641354
GO:0031323regulation of cellular metabolic process0.0278004416641354
GO:0005634nucleus0.0278004416641354
GO:0050678regulation of epithelial cell proliferation0.0278004416641354
GO:0035295tube development0.0278004416641354
GO:0042391regulation of membrane potential0.0278004416641354
GO:0046661male sex differentiation0.0278004416641354
GO:0043231intracellular membrane-bound organelle0.0278004416641354
GO:0043227membrane-bound organelle0.0278004416641354
GO:0042026protein refolding0.0278004416641354
GO:0045743positive regulation of fibroblast growth factor receptor signaling pathway0.0278004416641354
GO:0043257laminin-8 complex0.0278004416641354
GO:0060045positive regulation of cardiac muscle cell proliferation0.0278004416641354
GO:0005607laminin-2 complex0.0278004416641354
GO:0016913follicle-stimulating hormone activity0.0278004416641354
GO:0007267cell-cell signaling0.0278004416641354
GO:0003779actin binding0.0278004416641354
GO:0030326embryonic limb morphogenesis0.0278004416641354
GO:0035113embryonic appendage morphogenesis0.0278004416641354
GO:0050673epithelial cell proliferation0.0278004416641354
GO:0048523negative regulation of cellular process0.0298416882710965
GO:0048736appendage development0.0323157930315383
GO:0060173limb development0.0323157930315383
GO:0035107appendage morphogenesis0.0323157930315383
GO:0035108limb morphogenesis0.0323157930315383
GO:0031175neurite development0.0331103674160884
GO:0048519negative regulation of biological process0.0346241126411889
GO:0007268synaptic transmission0.0354221120952876
GO:0005605basal lamina0.0354221120952876
GO:0045595regulation of cell differentiation0.0354221120952876
GO:0030324lung development0.0354221120952876
GO:0065008regulation of biological quality0.0354221120952876
GO:0007167enzyme linked receptor protein signaling pathway0.0354221120952876
GO:0030323respiratory tube development0.0354221120952876
GO:0008528peptide receptor activity, G-protein coupled0.0354221120952876
GO:0001653peptide receptor activity0.0354221120952876
GO:0043229intracellular organelle0.0354221120952876
GO:0022610biological adhesion0.0354221120952876
GO:0007155cell adhesion0.0354221120952876
GO:0043226organelle0.0354221120952876
GO:0016070RNA metabolic process0.0354221120952876
GO:0048666neuron development0.0354221120952876
GO:0045880positive regulation of smoothened signaling pathway0.0354221120952876
GO:0042745circadian sleep/wake cycle0.0354221120952876
GO:0002053positive regulation of mesenchymal cell proliferation0.0354221120952876
GO:0060043regulation of cardiac muscle cell proliferation0.0354221120952876
GO:0031290retinal ganglion cell axon guidance0.0354221120952876
GO:0010464regulation of mesenchymal cell proliferation0.0354221120952876
GO:0047372acylglycerol lipase activity0.0354221120952876
GO:0045475locomotor rhythm0.0354221120952876
GO:0004572mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity0.0354221120952876
GO:0010463mesenchymal cell proliferation0.0354221120952876
GO:0043259laminin-10 complex0.0354221120952876
GO:0005654nucleoplasm0.0371680897574866
GO:0008015blood circulation0.0371680897574866
GO:0003013circulatory system process0.0371680897574866
GO:0019226transmission of nerve impulse0.0392981478635945
GO:0006936muscle contraction0.0392981478635945
GO:0003012muscle system process0.0392981478635945
GO:0048608reproductive structure development0.041239537551561
GO:0008406gonad development0.041239537551561
GO:0009653anatomical structure morphogenesis0.0446982945743933
GO:0005887integral to plasma membrane0.0446982945743933
GO:0007411axon guidance0.0446982945743933
GO:0030911TPR domain binding0.0446982945743933
GO:0060011Sertoli cell proliferation0.0446982945743933
GO:0048512circadian behavior0.0446982945743933
GO:0007622rhythmic behavior0.0446982945743933
GO:0001757somite specification0.0446982945743933
GO:0030297transmembrane receptor protein tyrosine kinase activator activity0.0446982945743933
GO:0040036regulation of fibroblast growth factor receptor signaling pathway0.0446982945743933
GO:0016043cellular component organization and biogenesis0.0448526907092937
GO:0031226intrinsic to plasma membrane0.0453829723111605
GO:0044459plasma membrane part0.0480055673039496
GO:0045137development of primary sexual characteristics0.0480055673039496
GO:0010467gene expression0.0491999571696071



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen
collagen secreting cell4.27e-346
chondroblast4.27e-346
chondrocyte4.27e-346
GAG secreting cell2.62e-239
carbohydrate secreting cell2.62e-239
extracellular matrix secreting cell1.22e-1415
stromal cell1.52e-0828
secretory cell5.81e-0736
Uber Anatomy
Ontology termp-valuen
cartilage tissue2.39e-663
skeletal tissue2.39e-663


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10
MA0004.10.00644352
MA0006.10.129559
MA0007.10.00328009
MA0009.10.106606
MA0014.11.33318e-13
MA0017.10.0489001
MA0019.10.25255
MA0024.10.106616
MA0025.10.0932021
MA0027.10.790244
MA0028.17.28261e-06
MA0029.10.314087
MA0030.10.907895
MA0031.10.425506
MA0038.10.501401
MA0040.12.40833
MA0041.12.58041
MA0042.10.977245
MA0043.10.0227983
MA0046.10.269117
MA0048.14.39114e-09
MA0050.10.133566
MA0051.10.05339
MA0052.12.45203
MA0055.14.57129e-07
MA0056.10
MA0057.10.446247
MA0058.10.00145589
MA0059.10.026756
MA0060.10.00180568
MA0061.14.80918e-05
MA0063.10
MA0066.10.403145
MA0067.10.158043
MA0068.10.115688
MA0069.10.162324
MA0070.10.0394406
MA0071.10.126828
MA0072.10.343508
MA0073.12.96601e-07
MA0074.10.0191864
MA0076.10.00167077
MA0077.10.0133614
MA0078.10.186391
MA0081.10.168011
MA0083.11.33897
MA0084.10.17385
MA0087.10.479396
MA0088.10.0328874
MA0089.10
MA0090.10.655271
MA0091.10.0122919
MA0092.10.109032
MA0093.10.0018435
MA0095.10
MA0098.10
MA0100.10.112812
MA0101.10.155327
MA0103.10.0307417
MA0105.10.000597185
MA0106.10.00900761
MA0107.10.196198
MA0108.20.702271
MA0109.10
MA0111.10.0998599
MA0113.10.0250621
MA0114.10.00367943
MA0115.10.0322933
MA0116.10.182027
MA0117.10.00306131
MA0119.10.0844557
MA0122.10.654177
MA0124.10.287789
MA0125.10.437162
MA0130.10
MA0131.10.685517
MA0132.10
MA0133.10
MA0135.10.0747319
MA0136.10.344841
MA0139.10.0569225
MA0140.10.221705
MA0141.10.0365903
MA0142.13.5728
MA0143.10.911113
MA0144.10.0978679
MA0145.12.29194e-05
MA0146.10
MA0147.10.000461844
MA0148.10.338213
MA0149.11.86637
MA0062.22.32794e-07
MA0035.20.362694
MA0039.29.00682e-14
MA0138.20.0157017
MA0002.20.0139997
MA0137.20.0934672
MA0104.20.000426209
MA0047.20.691662
MA0112.29.99864e-08
MA0065.21.65583e-06
MA0150.10.291299
MA0151.10
MA0152.10.245957
MA0153.10.796407
MA0154.10.0341189
MA0155.14.43543e-05
MA0156.10.0414293
MA0157.10.698797
MA0158.10
MA0159.10.000829049
MA0160.10.154276
MA0161.10
MA0162.15.05367e-06
MA0163.10.000132239
MA0164.11.3916
MA0080.20.176991
MA0018.21.26667e-05
MA0099.20.24732
MA0079.20
MA0102.20.0560451
MA0258.10.0509692
MA0259.10.148396
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
SUZ12#23512434.480204946311246.44925774245506e-161.23136019993467e-13



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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