FFCP PHASE1:Hg19::chr1:151020241..151020251,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54964|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26045|TSSclassifier=S|UniProt=Q9BUN1|association_with_transcript=-7bp_to_NM_017860,uc001ewn.2_5end|description=CAGE_peak_3_at_C1orf56_5end|id=chr1:151020241..151020251,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;6.65e-15;1!CL:0000228;1.72e-14;1!CL:0002372;1.72e-14;1!CL:0002593;6.80e-08;2|ontology_enrichment_celltype_v019_2=CL:0002553,6.22e-15,1;CL:0000228,1.23e-14,1;CL:0002372,1.23e-14,1;CL:0002593,8.04e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.76e-15!106;DOID:0050687!3.68e-14!143;DOID:162!3.94e-07!235|ontology_enrichment_disease_v019=DOID:5093;2.58e-14;4!DOID:1612;2.58e-14;4|ontology_enrichment_disease_v019_2=DOID:5093,2.11e-14,4;DOID:1612,2.11e-14,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001905;6.80e-08;2!UBERON:0002757;6.80e-08;2!UBERON:0010134;6.80e-08;2!UBERON:0005408;6.80e-08;2!UBERON:0002456;6.80e-08;2!UBERON:0001899;6.80e-08;2!UBERON:0000473;9.55e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0002456,8.04e-08,2;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0000473,1.00e-07,8|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.791300934685361,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0.490385709340376,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0,0.600952235626387,0.113432183160021,0.179389635688862,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,0.71181185733329,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,2.94848165003288,0,0,0.368965315629341,0,0,0,0,0,0.651616610620649,0,0,0.34779121492523,0.352226082707465,0.288732895522148,0.462985512576611,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.144781306667579,0.61642896765115,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,1.03473071292505,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0.462629081407967,0,0,0,0.116210378459959,0.120859449591622,0,0.368323955743585,0,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.366277859273374,0.495056999523528,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0.384380134730212,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0.422215270595328,0,0.75894634753143,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.561421621224659,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0.251932747854276,0.409074730008619,0,0.311039587661807,0.269605053441981,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0.219385397153973,0.435753854075961,0.41827123283581,0,0.113942055847001,0.23056390438806,0,0.325942115766024,0.319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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54964 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26045 | |||
|TSSclassifier=S | |||
|UniProt=Q9BUN1 | |||
|association_with_transcript=-7bp_to_NM_017860,uc001ewn.2_5end | |||
|description=CAGE_peak_3_at_C1orf56_5end | |||
|id=chr1:151020241..151020251,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;6.65e-15;1!CL:0000228;1.72e-14;1!CL:0002372;1.72e-14;1!CL:0002593;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.22e-15,1;CL:0000228,1.23e-14,1;CL:0002372,1.23e-14,1;CL:0002593,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.76e-15!106;DOID:0050687!3.68e-14!143;DOID:162!3.94e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.58e-14;4!DOID:1612;2.58e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.11e-14,4;DOID:1612,2.11e-14,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.80e-08;2!UBERON:0002757;6.80e-08;2!UBERON:0010134;6.80e-08;2!UBERON:0005408;6.80e-08;2!UBERON:0002456;6.80e-08;2!UBERON:0001899;6.80e-08;2!UBERON:0000473;9.55e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,8.04e-08,2;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0000473,1.00e-07,8 | |||
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| |||
|short_description=p3@C1orf56 | |||
}} |
Revision as of 00:18, 12 September 2013
Short description: | p3@C1orf56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C1orf56_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_017860, uc001ewn.2_5end |
EntrezGene: | C1orf56 |
HGNC: | 26045 |
UniProt: | Q9BUN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.22e-15 | 1 |
multinucleate cell | 1.23e-14 | 1 |
myotube | 1.23e-14 | 1 |
smooth muscle cell of the internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 8.04e-08 | 2 |
pineal body | 9.19e-08 | 2 |
regional part of epithalamus | 9.19e-08 | 2 |
secretory circumventricular organ | 9.19e-08 | 2 |
circumventricular organ | 9.19e-08 | 2 |
epithalamus | 9.19e-08 | 2 |
testis | 1.00e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.11e-14 | 4 |
breast cancer | 2.11e-14 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.