FFCP PHASE1:Hg19::chr10:30020814..30020823,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:30020814..30020823,-|id=chr10:30020814..30020823,-|ontology_enrichment_celltype=CL:0002551!9.88e-07!6|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.19e-14!115;UBERON:0003408!8.93e-09!10;UBERON:0000481!3.67e-08!347;UBERON:0006331!1.87e-07!3;UBERON:0000988!2.11e-07!3;UBERON:0001044!2.30e-07!6;UBERON:0003293!2.30e-07!6;UBERON:0003294!2.30e-07!6;UBERON:0010047!2.30e-07!6;UBERON:0000167!2.30e-07!6;UBERON:0002298!3.46e-07!8;UBERON:0003076!4.10e-07!15;UBERON:0003057!4.10e-07!15|ontology_enrichment_uberon_v019=UBERON:0001389;2.58e-34;1!UBERON:0000026;2.58e-34;1!UBERON:0008784;2.58e-34;1!UBERON:0006058;2.58e-34;1!UBERON:0003663;2.58e-34;1!UBERON:0004256;2.58e-34;1!UBERON:0004708;2.58e-34;1!UBERON:0002101;2.58e-34;1!UBERON:0004709;2.58e-34;1!UBERON:0002529;2.58e-34;1!UBERON:0010538;2.58e-34;1!UBERON:0003661;2.58e-34;1!UBERON:0010890;2.58e-34;1!UBERON:0002471;2.58e-34;1!UBERON:0001383;2.58e-34;1!UBERON:0010758;2.58e-34;1!UBERON:0010707;2.58e-34;1!UBERON:0000978;2.58e-34;1!UBERON:0002103;2.58e-34;1!UBERON:0001665;2.58e-34;1!UBERON:0003823;2.58e-34;1!UBERON:0000154;2.58e-34;1!UBERON:0010709;2.58e-34;1!UBERON:0005090;6.48e-18;2!UBERON:0001630;6.48e-18;2!UBERON:0002385;3.56e-10;31!UBERON:0001015;3.56e-10;31!UBERON:0000383;3.56e-10;31!UBERON:0002346;1.50e-09;4!UBERON:0000923;1.50e-09;4!UBERON:0010316;1.50e-09;4!UBERON:0005291;1.50e-09;4!UBERON:0001134;2.45e-09;16!UBERON:0002036;2.45e-09;16!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.58e-34,1;UBERON:0001389,2.58e-34,1;UBERON:0000026,2.58e-34,1;UBERON:0008784,2.58e-34,1;UBERON:0006058,2.58e-34,1;UBERON:0003663,2.58e-34,1;UBERON:0004256,2.58e-34,1;UBERON:0004708,2.58e-34,1;UBERON:0002101,2.58e-34,1;UBERON:0004709,2.58e-34,1;UBERON:0002529,2.58e-34,1;UBERON:0010538,2.58e-34,1;UBERON:0003661,2.58e-34,1;UBERON:0010890,2.58e-34,1;UBERON:0002471,2.58e-34,1;UBERON:0001383,2.58e-34,1;UBERON:0004357,2.58e-34,1;UBERON:0004347,2.58e-34,1;UBERON:0005420,2.58e-34,1;UBERON:0005732,2.58e-34,1;UBERON:0010758,2.58e-34,1;UBERON:0010707,2.58e-34,1;UBERON:0000978,2.58e-34,1;UBERON:0002103,2.58e-34,1;UBERON:0001665,2.58e-34,1;UBERON:0003823,2.58e-34,1;UBERON:0000154,2.58e-34,1;UBERON:0010709,2.58e-34,1;UBERON:0005733,2.58e-34,1;UBERON:0005730,2.58e-34,1;UBERON:0005090,6.48e-18,2;UBERON:0001630,6.48e-18,2|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,4.89676196057055,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0.347716544605159,0,0,0.17071847709395,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,3.88457302312737,0.410651227424988,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,1.22574160876953,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.372448285775147,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p@chr10:30020814..30020823,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:30020814..30020823,- | |||
|id=chr10:30020814..30020823,- | |||
|ontology_enrichment_celltype=CL:0002551!9.88e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.19e-14!115;UBERON:0003408!8.93e-09!10;UBERON:0000481!3.67e-08!347;UBERON:0006331!1.87e-07!3;UBERON:0000988!2.11e-07!3;UBERON:0001044!2.30e-07!6;UBERON:0003293!2.30e-07!6;UBERON:0003294!2.30e-07!6;UBERON:0010047!2.30e-07!6;UBERON:0000167!2.30e-07!6;UBERON:0002298!3.46e-07!8;UBERON:0003076!4.10e-07!15;UBERON:0003057!4.10e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.58e-34;1!UBERON:0000026;2.58e-34;1!UBERON:0008784;2.58e-34;1!UBERON:0006058;2.58e-34;1!UBERON:0003663;2.58e-34;1!UBERON:0004256;2.58e-34;1!UBERON:0004708;2.58e-34;1!UBERON:0002101;2.58e-34;1!UBERON:0004709;2.58e-34;1!UBERON:0002529;2.58e-34;1!UBERON:0010538;2.58e-34;1!UBERON:0003661;2.58e-34;1!UBERON:0010890;2.58e-34;1!UBERON:0002471;2.58e-34;1!UBERON:0001383;2.58e-34;1!UBERON:0010758;2.58e-34;1!UBERON:0010707;2.58e-34;1!UBERON:0000978;2.58e-34;1!UBERON:0002103;2.58e-34;1!UBERON:0001665;2.58e-34;1!UBERON:0003823;2.58e-34;1!UBERON:0000154;2.58e-34;1!UBERON:0010709;2.58e-34;1!UBERON:0005090;6.48e-18;2!UBERON:0001630;6.48e-18;2!UBERON:0002385;3.56e-10;31!UBERON:0001015;3.56e-10;31!UBERON:0000383;3.56e-10;31!UBERON:0002346;1.50e-09;4!UBERON:0000923;1.50e-09;4!UBERON:0010316;1.50e-09;4!UBERON:0005291;1.50e-09;4!UBERON:0001134;2.45e-09;16!UBERON:0002036;2.45e-09;16!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.58e-34,1;UBERON:0001389,2.58e-34,1;UBERON:0000026,2.58e-34,1;UBERON:0008784,2.58e-34,1;UBERON:0006058,2.58e-34,1;UBERON:0003663,2.58e-34,1;UBERON:0004256,2.58e-34,1;UBERON:0004708,2.58e-34,1;UBERON:0002101,2.58e-34,1;UBERON:0004709,2.58e-34,1;UBERON:0002529,2.58e-34,1;UBERON:0010538,2.58e-34,1;UBERON:0003661,2.58e-34,1;UBERON:0010890,2.58e-34,1;UBERON:0002471,2.58e-34,1;UBERON:0001383,2.58e-34,1;UBERON:0004357,2.58e-34,1;UBERON:0004347,2.58e-34,1;UBERON:0005420,2.58e-34,1;UBERON:0005732,2.58e-34,1;UBERON:0010758,2.58e-34,1;UBERON:0010707,2.58e-34,1;UBERON:0000978,2.58e-34,1;UBERON:0002103,2.58e-34,1;UBERON:0001665,2.58e-34,1;UBERON:0003823,2.58e-34,1;UBERON:0000154,2.58e-34,1;UBERON:0010709,2.58e-34,1;UBERON:0005733,2.58e-34,1;UBERON:0005730,2.58e-34,1;UBERON:0005090,6.48e-18,2;UBERON:0001630,6.48e-18,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,4.89676196057055,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0.347716544605159,0,0,0.17071847709395,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,3.88457302312737,0.410651227424988,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,1.22574160876953,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.372448285775147,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr10:30020814..30020823,- | |||
}} |
Revision as of 13:05, 10 September 2013
Short description: | p@chr10:30020814..30020823, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:30020814..30020823, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 2.58e-34 | 1 |
soleus muscle | 2.58e-34 | 1 |
appendage | 2.58e-34 | 1 |
lower limb segment | 2.58e-34 | 1 |
multi-limb segment region | 2.58e-34 | 1 |
hindlimb muscle | 2.58e-34 | 1 |
hindlimb zeugopod muscle | 2.58e-34 | 1 |
paired limb/fin | 2.58e-34 | 1 |
limb | 2.58e-34 | 1 |
pelvic appendage | 2.58e-34 | 1 |
limb segment | 2.58e-34 | 1 |
paired limb/fin segment | 2.58e-34 | 1 |
limb muscle | 2.58e-34 | 1 |
pelvic complex muscle | 2.58e-34 | 1 |
zeugopod | 2.58e-34 | 1 |
muscle of leg | 2.58e-34 | 1 |
paired limb/fin bud | 2.58e-34 | 1 |
limb bud | 2.58e-34 | 1 |
pelvic appendage bud | 2.58e-34 | 1 |
limb/fin field | 2.58e-34 | 1 |
subdivision of organism along appendicular axis | 2.58e-34 | 1 |
appendage girdle complex | 2.58e-34 | 1 |
leg | 2.58e-34 | 1 |
hindlimb | 2.58e-34 | 1 |
triceps surae | 2.58e-34 | 1 |
hindlimb zeugopod | 2.58e-34 | 1 |
posterior region of body | 2.58e-34 | 1 |
pelvic complex | 2.58e-34 | 1 |
limb field | 2.58e-34 | 1 |
hindlimb/pelvic fin field | 2.58e-34 | 1 |
muscle structure | 6.48e-18 | 2 |
muscle organ | 6.48e-18 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.