FFCP PHASE1:Hg19::chr10:88734366..88734378,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C84|description=CAGE_peak_at_chr10:88734366..88734378,-|id=chr10:88734366..88734378,-|ontology_enrichment_celltype=CL:0002541!6.66e-21!3;CL:0002537!2.78e-13!5;CL:1001319!9.94e-08!1;CL:1000600!9.94e-08!1;CL:0000083!1.07e-07!4|ontology_enrichment_celltype_v019=CL:0002537;2.01e-59;5!CL:0000039;6.48e-20;7!CL:0000586;6.48e-20;7!CL:0000349;2.39e-16;19|ontology_enrichment_celltype_v019_2=CL:0002537,2.46e-59,5;CL:0000039,6.48e-20,7;CL:0000586,6.48e-20,7;CL:0000349,2.52e-16,19|ontology_enrichment_development_v019=UBERON:0003124;5.05e-34;1|ontology_enrichment_disease=DOID:178!2.52e-08!1;DOID:326!2.52e-08!1;DOID:3978!2.52e-08!1;DOID:3394!2.52e-08!1;DOID:5844!2.52e-08!1;DOID:1799!4.40e-08!1;DOID:10165!4.40e-08!1;DOID:1798!4.40e-08!1;DOID:1793!1.07e-07!4|ontology_enrichment_disease_v019=DOID:3095;5.09e-07;22!DOID:2994;5.09e-07;22|ontology_enrichment_disease_v019_2=DOID:3095,5.09e-07,22;DOID:2994,5.09e-07,22|ontology_enrichment_uberon=UBERON:0005631!1.77e-30!14;UBERON:0000158!1.77e-30!14;UBERON:0003124!2.33e-24!7;UBERON:0000476!6.66e-21!3;UBERON:0000920!6.66e-21!3;UBERON:0000478!2.61e-17!24;UBERON:0004923!2.14e-12!57;UBERON:0000305!1.27e-09!7;UBERON:0002075!3.89e-09!18;UBERON:0004871!1.78e-08!8;UBERON:0002171!5.05e-08!1;UBERON:0006518!5.05e-08!1;UBERON:0008949!5.05e-08!1;UBERON:0000101!5.05e-08!1;UBERON:0002167!5.05e-08!1;UBERON:0001987!6.00e-08!4;UBERON:0004340!6.00e-08!4;UBERON:0004645!9.94e-08!1;UBERON:0001256!9.94e-08!1;UBERON:0001259!9.94e-08!1|ontology_enrichment_uberon_v019=UBERON:0000305;9.26e-43;7!UBERON:0005631;3.07e-30;10!UBERON:0000158;3.07e-30;10!UBERON:0000478;1.82e-22;24!UBERON:0001987;1.44e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.07e-42,7;UBERON:0005631,5.99e-38,14;UBERON:0000158,5.99e-38,14;UBERON:0004871,1.72e-37,8;UBERON:0000478,1.82e-22,24;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0004923,1.49e-08,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,1.78178808499583,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52587995496613,4.23724750495832,0.638002319463839,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr10:88734366..88734378,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr10:88734366..88734378,- | |||
|id=chr10:88734366..88734378,- | |||
|ontology_enrichment_celltype=CL:0002541!6.66e-21!3;CL:0002537!2.78e-13!5;CL:1001319!9.94e-08!1;CL:1000600!9.94e-08!1;CL:0000083!1.07e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.01e-59;5!CL:0000039;6.48e-20;7!CL:0000586;6.48e-20;7!CL:0000349;2.39e-16;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.46e-59,5;CL:0000039,6.48e-20,7;CL:0000586,6.48e-20,7;CL:0000349,2.52e-16,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.05e-34;1 | |||
|ontology_enrichment_disease=DOID:178!2.52e-08!1;DOID:326!2.52e-08!1;DOID:3978!2.52e-08!1;DOID:3394!2.52e-08!1;DOID:5844!2.52e-08!1;DOID:1799!4.40e-08!1;DOID:10165!4.40e-08!1;DOID:1798!4.40e-08!1;DOID:1793!1.07e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.09e-07;22!DOID:2994;5.09e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.09e-07,22;DOID:2994,5.09e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.77e-30!14;UBERON:0000158!1.77e-30!14;UBERON:0003124!2.33e-24!7;UBERON:0000476!6.66e-21!3;UBERON:0000920!6.66e-21!3;UBERON:0000478!2.61e-17!24;UBERON:0004923!2.14e-12!57;UBERON:0000305!1.27e-09!7;UBERON:0002075!3.89e-09!18;UBERON:0004871!1.78e-08!8;UBERON:0002171!5.05e-08!1;UBERON:0006518!5.05e-08!1;UBERON:0008949!5.05e-08!1;UBERON:0000101!5.05e-08!1;UBERON:0002167!5.05e-08!1;UBERON:0001987!6.00e-08!4;UBERON:0004340!6.00e-08!4;UBERON:0004645!9.94e-08!1;UBERON:0001256!9.94e-08!1;UBERON:0001259!9.94e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;9.26e-43;7!UBERON:0005631;3.07e-30;10!UBERON:0000158;3.07e-30;10!UBERON:0000478;1.82e-22;24!UBERON:0001987;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.07e-42,7;UBERON:0005631,5.99e-38,14;UBERON:0000158,5.99e-38,14;UBERON:0004871,1.72e-37,8;UBERON:0000478,1.82e-22,24;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0004923,1.49e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,1.78178808499583,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52587995496613,4.23724750495832,0.638002319463839,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:88734366..88734378,- | |||
}} |
Revision as of 14:48, 10 September 2013
Short description: | p@chr10:88734366..88734378, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:88734366..88734378, - |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.46e-59 | 5 |
germ line cell | 6.48e-20 | 7 |
germ cell | 6.48e-20 | 7 |
extraembryonic cell | 2.52e-16 | 19 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.07e-42 | 7 |
extraembryonic membrane | 5.99e-38 | 14 |
membranous layer | 5.99e-38 | 14 |
somatic layer of lateral plate mesoderm | 1.72e-37 | 8 |
extraembryonic structure | 1.82e-22 | 24 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
organ component layer | 1.49e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.09e-07 | 22 |
germ cell cancer | 5.09e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.