FFCP PHASE1:Hg19::chr10:105036887..105036903,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6057 | |||
|TSSclassifier=S | |||
|UniProt=Q16352 | |||
|association_with_transcript=-16bp_to_ENST00000369849,NM_032727,uc001kws.2,uc009xxj.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_INA_5end | |||
|id=chr10:105036887..105036903,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.91e-08!59;CL:0000221!3.93e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.28e-08,59;CL:0002319,1.21e-07,25;CL:0000047,3.39e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.41e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.47e-08;22!DOID:2994;3.47e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.93e-08,22;DOID:2994,3.93e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.05e-39!94;UBERON:0001016!5.05e-39!94;UBERON:0000924!2.08e-36!173;UBERON:0006601!2.08e-36!173;UBERON:0004121!1.99e-35!169;UBERON:0005743!2.63e-35!86;UBERON:0001017!1.55e-34!82;UBERON:0001049!7.69e-33!57;UBERON:0005068!7.69e-33!57;UBERON:0006241!7.69e-33!57;UBERON:0007135!7.69e-33!57;UBERON:0002346!5.41e-31!90;UBERON:0003075!3.15e-30!86;UBERON:0007284!3.15e-30!86;UBERON:0002616!5.21e-28!59;UBERON:0000033!2.04e-27!123;UBERON:0000955!2.81e-27!69;UBERON:0006238!2.81e-27!69;UBERON:0002780!2.08e-26!41;UBERON:0001890!2.08e-26!41;UBERON:0006240!2.08e-26!41;UBERON:0000153!5.93e-26!129;UBERON:0007811!5.93e-26!129;UBERON:0003056!1.44e-25!61;UBERON:0003080!3.72e-25!42;UBERON:0002020!4.24e-22!34;UBERON:0003528!4.24e-22!34;UBERON:0001893!6.60e-22!34;UBERON:0001869!2.94e-21!32;UBERON:0002791!3.49e-21!33;UBERON:0000119!5.00e-21!312;UBERON:0000483!2.04e-20!309;UBERON:0000475!2.49e-20!365;UBERON:0000064!8.68e-19!219;UBERON:0000922!1.15e-17!612;UBERON:0000956!4.24e-17!25;UBERON:0000203!4.24e-17!25;UBERON:0000468!1.34e-16!659;UBERON:0002619!1.51e-16!22;UBERON:0001950!1.68e-15!20;UBERON:0002050!3.87e-15!605;UBERON:0005423!3.87e-15!605;UBERON:0000467!5.08e-15!625;UBERON:0000923!5.39e-15!604;UBERON:0005291!5.39e-15!604;UBERON:0006598!5.39e-15!604;UBERON:0002532!5.39e-15!604;UBERON:0000480!8.46e-15!626;UBERON:0000481!3.02e-14!347;UBERON:0000025!3.20e-14!194;UBERON:0004111!6.98e-14!241;UBERON:0000477!5.74e-12!286;UBERON:0000062!4.75e-11!511;UBERON:0007023!8.03e-11!115;UBERON:0003076!9.24e-09!15;UBERON:0003057!9.24e-09!15;UBERON:0004732!1.83e-07!13;UBERON:0004733!4.10e-07!12;UBERON:0002028!4.10e-07!12;UBERON:0007277!4.10e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.24e-24;32!UBERON:0003528;4.34e-24;34!UBERON:0002020;4.34e-24;34!UBERON:0001893;6.28e-24;34!UBERON:0002780;6.53e-24;41!UBERON:0001890;6.53e-24;41!UBERON:0002791;8.09e-24;32!UBERON:0000073;6.27e-23;53!UBERON:0002616;6.27e-23;53!UBERON:0000956;1.72e-21;25!UBERON:0000203;1.72e-21;25!UBERON:0002619;9.01e-21;22!UBERON:0001950;2.00e-19;20!UBERON:0001016;4.46e-17;83!UBERON:0000955;1.50e-16;68!UBERON:0001017;1.95e-15;75!UBERON:0004732;1.97e-08;13!UBERON:0004733;5.50e-08;12!UBERON:0002028;5.50e-08;12!UBERON:0011216;7.41e-08;132!UBERON:0000125;7.41e-08;9!UBERON:0002308;7.41e-08;9!UBERON:0002420;1.20e-07;9!UBERON:0007245;1.20e-07;9!UBERON:0010009;1.20e-07;9!UBERON:0010011;1.20e-07;9!UBERON:0000454;1.20e-07;9!UBERON:0001894;3.79e-07;7!UBERON:0001871;4.50e-07;6!UBERON:0000200;7.89e-07;6!UBERON:0010314;7.95e-07;132 | |||
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| |||
|short_description=p1@INA | |||
}} |
Revision as of 11:30, 10 September 2013
Short description: | p1@INA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_INA_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -16bp_to_ENST00000369849, NM_032727, uc001kws.2, uc009xxj.2_5end |
EntrezGene: | INA |
HGNC: | 6057 |
UniProt: | Q16352 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.28e-08 | 59 |
neural cell | 1.21e-07 | 25 |
neuronal stem cell | 3.39e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.93e-08 | 22 |
germ cell cancer | 3.93e-08 | 22 |
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