FFCP PHASE1:Hg19::chr10:114889986..114890019,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1563|description=CAGE_peak_at_chr10:114889986..114890019,+|id=chr10:114889986..114890019,+|ontology_enrichment_celltype=CL:0000136!3.06e-17!15;CL:0002617!6.89e-12!2;CL:0000214!2.12e-08!3;CL:0002579!3.29e-08!3;CL:0002334!2.55e-07!12|ontology_enrichment_celltype_v019=CL:0002521;2.89e-12;3|ontology_enrichment_celltype_v019_2=CL:0002521,2.89e-12,3|ontology_enrichment_development_v019=UBERON:0006222;7.06e-34;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001897!2.84e-12!2;UBERON:0004457!3.24e-11!12;UBERON:0000042!3.24e-11!12;UBERON:0003688!1.21e-08!6;UBERON:0002358!1.21e-08!6;UBERON:0003684!1.21e-08!6;UBERON:0001178!1.21e-08!6;UBERON:0006915!2.12e-08!3;UBERON:0002018!2.12e-08!3;UBERON:0002217!2.12e-08!3;UBERON:0007616!2.12e-08!3;UBERON:0001894!7.23e-08!7;UBERON:0006222!7.23e-08!7;UBERON:0007029!5.89e-07!1;UBERON:0000998!6.99e-07!1;UBERON:0006868!6.99e-07!1;UBERON:0002336!7.39e-07!1;UBERON:0001018!7.39e-07!1;UBERON:0002473!7.39e-07!1;UBERON:0005340!7.39e-07!1;UBERON:0002316!7.39e-07!1;UBERON:0003544!7.39e-07!1;UBERON:0001020!7.39e-07!1;UBERON:0005970!7.39e-07!1;UBERON:0002437!7.39e-07!1|ontology_enrichment_uberon_v019=UBERON:0001894;7.13e-20;7!UBERON:0001897;5.48e-18;2!UBERON:0010225;5.48e-18;2!UBERON:0002190;2.89e-12;3!UBERON:0002784;1.12e-09;4!UBERON:0000945;5.73e-08;5!UBERON:0010039;5.73e-08;5!UBERON:0001872;6.13e-08;5!UBERON:0002072;7.01e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0001897,5.48e-18,2;UBERON:0010225,5.48e-18,2;UBERON:0002190,2.89e-12,3;UBERON:0002784,1.12e-09,4;UBERON:0001872,6.13e-08,5;UBERON:0002072,7.01e-08,5;UBERON:0002780,7.58e-08,41;UBERON:0001890,7.58e-08,41;UBERON:0003080,7.58e-08,41;UBERON:0006240,7.58e-08,41|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.584622030967192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.87411556580271,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35239065430479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18789923607288,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,5.80418607621146,0.20686599172379,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:114889986..114890019,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1563 | |||
|description=CAGE_peak_at_chr10:114889986..114890019,+ | |||
|id=chr10:114889986..114890019,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.06e-17!15;CL:0002617!6.89e-12!2;CL:0000214!2.12e-08!3;CL:0002579!3.29e-08!3;CL:0002334!2.55e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002521;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.89e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006222;7.06e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001897!2.84e-12!2;UBERON:0004457!3.24e-11!12;UBERON:0000042!3.24e-11!12;UBERON:0003688!1.21e-08!6;UBERON:0002358!1.21e-08!6;UBERON:0003684!1.21e-08!6;UBERON:0001178!1.21e-08!6;UBERON:0006915!2.12e-08!3;UBERON:0002018!2.12e-08!3;UBERON:0002217!2.12e-08!3;UBERON:0007616!2.12e-08!3;UBERON:0001894!7.23e-08!7;UBERON:0006222!7.23e-08!7;UBERON:0007029!5.89e-07!1;UBERON:0000998!6.99e-07!1;UBERON:0006868!6.99e-07!1;UBERON:0002336!7.39e-07!1;UBERON:0001018!7.39e-07!1;UBERON:0002473!7.39e-07!1;UBERON:0005340!7.39e-07!1;UBERON:0002316!7.39e-07!1;UBERON:0003544!7.39e-07!1;UBERON:0001020!7.39e-07!1;UBERON:0005970!7.39e-07!1;UBERON:0002437!7.39e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;7.13e-20;7!UBERON:0001897;5.48e-18;2!UBERON:0010225;5.48e-18;2!UBERON:0002190;2.89e-12;3!UBERON:0002784;1.12e-09;4!UBERON:0000945;5.73e-08;5!UBERON:0010039;5.73e-08;5!UBERON:0001872;6.13e-08;5!UBERON:0002072;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0001897,5.48e-18,2;UBERON:0010225,5.48e-18,2;UBERON:0002190,2.89e-12,3;UBERON:0002784,1.12e-09,4;UBERON:0001872,6.13e-08,5;UBERON:0002072,7.01e-08,5;UBERON:0002780,7.58e-08,41;UBERON:0001890,7.58e-08,41;UBERON:0003080,7.58e-08,41;UBERON:0006240,7.58e-08,41 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.584622030967192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.87411556580271,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35239065430479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18789923607288,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,5.80418607621146,0.20686599172379,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:114889986..114890019,+ | |||
}} |
Revision as of 11:49, 10 September 2013
Short description: | p@chr10:114889986..114890019, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:114889986..114890019, + |
Coexpression cluster: | C1563_thalamus_gastric_leiomyoblastoma_parietal_diencephalon_tubular_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 6.48e-20 | 7 |
future diencephalon | 6.48e-20 | 7 |
dorsal plus ventral thalamus | 5.48e-18 | 2 |
thalamic complex | 5.48e-18 | 2 |
subcutaneous adipose tissue | 2.89e-12 | 3 |
regional part of diencephalon | 1.12e-09 | 4 |
parietal lobe | 6.13e-08 | 5 |
hypodermis | 7.01e-08 | 5 |
regional part of forebrain | 7.58e-08 | 41 |
forebrain | 7.58e-08 | 41 |
anterior neural tube | 7.58e-08 | 41 |
future forebrain | 7.58e-08 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.