FFCP PHASE1:Hg19::chr11:84019133..84019135,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C19|description=CAGE_peak_at_chr11:84019133..84019135,-|id=chr11:84019133..84019135,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000054;5.96e-34;2!CL:0000137;5.96e-34;2!CL:0000092;5.96e-34;2!CL:0002092;6.34e-08;10|ontology_enrichment_celltype_v019_2=CL:0000054,7.05e-34,2;CL:0000137,7.05e-34,2;CL:0000092,7.05e-34,2;CL:0002092,6.56e-08,10;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11|ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10!CL:0000335;2.55e-07;11|ontology_enrichment_disease=DOID:0060085!8.14e-11!1;DOID:3165!8.14e-11!1;DOID:0060121!8.14e-11!1;DOID:2438!8.14e-11!1;DOID:4418!8.14e-11!1;DOID:3111!2.50e-10!1;DOID:3603!2.50e-10!1|ontology_enrichment_disease_v019=DOID:0060085;3.34e-66;1!DOID:3165;3.34e-66;1!DOID:0060121;3.34e-66;1!DOID:2438;3.34e-66;1!DOID:4418;3.34e-66;1!DOID:200;5.96e-34;2!DOID:4305;5.96e-34;2!DOID:0060072;9.45e-18;4!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6|ontology_enrichment_disease_v019_2=DOID:0060085,4.66e-66,1;DOID:3165,4.66e-66,1;DOID:0060121,4.66e-66,1;DOID:2438,4.66e-66,1;DOID:4418,4.66e-66,1;DOID:200,7.05e-34,2;DOID:4305,7.05e-34,2;DOID:0060072,1.03e-17,4;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6|ontology_enrichment_uberon=UBERON:0006331!5.81e-13!3;UBERON:0000988!1.00e-12!3;UBERON:0002298!1.31e-10!8;UBERON:0002038!1.89e-10!1;UBERON:0009661!1.89e-10!1|ontology_enrichment_uberon_v019=UBERON:0000014;9.45e-18;4!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11!UBERON:0002371;8.14e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.03e-17,4;UBERON:0000473,1.35e-09,8;UBERON:0003135,2.47e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,4.81034942126376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.757786982182394,1.87574891109325,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:84019133..84019135,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr11:84019133..84019135,- | |||
|id=chr11:84019133..84019135,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;5.96e-34;2!CL:0000137;5.96e-34;2!CL:0000092;5.96e-34;2!CL:0002092;6.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.05e-34,2;CL:0000137,7.05e-34,2;CL:0000092,7.05e-34,2;CL:0002092,6.56e-08,10;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10!CL:0000335;2.55e-07;11 | |||
|ontology_enrichment_disease=DOID:0060085!8.14e-11!1;DOID:3165!8.14e-11!1;DOID:0060121!8.14e-11!1;DOID:2438!8.14e-11!1;DOID:4418!8.14e-11!1;DOID:3111!2.50e-10!1;DOID:3603!2.50e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.34e-66;1!DOID:3165;3.34e-66;1!DOID:0060121;3.34e-66;1!DOID:2438;3.34e-66;1!DOID:4418;3.34e-66;1!DOID:200;5.96e-34;2!DOID:4305;5.96e-34;2!DOID:0060072;9.45e-18;4!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.66e-66,1;DOID:3165,4.66e-66,1;DOID:0060121,4.66e-66,1;DOID:2438,4.66e-66,1;DOID:4418,4.66e-66,1;DOID:200,7.05e-34,2;DOID:4305,7.05e-34,2;DOID:0060072,1.03e-17,4;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0006331!5.81e-13!3;UBERON:0000988!1.00e-12!3;UBERON:0002298!1.31e-10!8;UBERON:0002038!1.89e-10!1;UBERON:0009661!1.89e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;9.45e-18;4!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11!UBERON:0002371;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.03e-17,4;UBERON:0000473,1.35e-09,8;UBERON:0003135,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,4.81034942126376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.757786982182394,1.87574891109325,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:84019133..84019135,- | |||
}} |
Revision as of 19:58, 10 September 2013
Short description: | p@chr11:84019133..84019135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:84019133..84019135, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.05e-34 | 2 |
osteocyte | 7.05e-34 | 2 |
osteoclast | 7.05e-34 | 2 |
bone marrow cell | 6.56e-08 | 10 |
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.03e-17 | 4 |
testis | 1.35e-09 | 8 |
male reproductive organ | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.66e-66 | 1 |
skin benign neoplasm | 4.66e-66 | 1 |
integumentary system benign neoplasm | 4.66e-66 | 1 |
dermis tumor | 4.66e-66 | 1 |
cutaneous fibrous histiocytoma | 4.66e-66 | 1 |
giant cell tumor | 7.05e-34 | 2 |
bone giant cell tumor | 7.05e-34 | 2 |
benign neoplasm | 1.03e-17 | 4 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.