FFCP PHASE1:Hg19::chr12:59175485..59175503,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000550678,uc001sqq.1_5end|description=CAGE_peak_1_at_ENST00000550678_5end,CAGE_peak_1_at_uc001sqq.1_5end|id=chr12:59175485..59175503,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;5.30e-19;4!UBERON:0007284;5.30e-19;4!UBERON:0010226;2.45e-09;1!UBERON:0006603;4.76e-08;65!UBERON:0009117;6.52e-08;10!UBERON:0005564;6.52e-08;10|ontology_enrichment_disease=DOID:114!1.53e-08!2|ontology_enrichment_disease_v019=DOID:114;2.34e-17;2!DOID:178;2.45e-09;1!DOID:326;2.45e-09;1!DOID:3978;2.45e-09;1!DOID:3394;2.45e-09;1!DOID:5844;2.45e-09;1!DOID:1287;3.91e-09;4|ontology_enrichment_disease_v019_2=DOID:114,2.07e-17,2;DOID:178,2.16e-09,1;DOID:326,2.16e-09,1;DOID:3978,2.16e-09,1;DOID:3394,2.16e-09,1;DOID:5844,2.16e-09,1;DOID:1287,3.68e-09,4|ontology_enrichment_uberon=UBERON:0007023!5.95e-55!115;UBERON:0001950!4.56e-14!20;UBERON:0002619!1.14e-12!22;UBERON:0003978!5.93e-12!3;UBERON:0009751!5.93e-12!3;UBERON:0000946!5.93e-12!3;UBERON:0002523!5.93e-12!3;UBERON:0005983!5.93e-12!3;UBERON:0002165!5.93e-12!3;UBERON:0002062!5.93e-12!3;UBERON:0007280!5.93e-12!3;UBERON:0002021!1.40e-11!5;UBERON:0000956!5.59e-11!25;UBERON:0000203!5.59e-11!25;UBERON:0001869!5.58e-10!32;UBERON:0001893!2.78e-09!34;UBERON:0007100!3.29e-09!27;UBERON:0003080!1.16e-08!42;UBERON:0002133!1.28e-08!2;UBERON:0003135!3.99e-08!11;UBERON:0002791!6.08e-08!33;UBERON:0002020!1.16e-07!34;UBERON:0003528!1.16e-07!34;UBERON:0002780!2.25e-07!41;UBERON:0001890!2.25e-07!41;UBERON:0006240!2.25e-07!41|ontology_enrichment_uberon_v019=UBERON:0003978;4.04e-25;3!UBERON:0000946;4.04e-25;3!UBERON:0002133;1.49e-17;2!UBERON:0007100;3.25e-15;25!UBERON:0002021;8.86e-15;5!UBERON:0004151;8.14e-12;3!UBERON:0001301;1.03e-09;1!UBERON:0002135;1.21e-09;1!UBERON:0002134;1.21e-09;1!UBERON:0005208;1.21e-09;1!UBERON:0004145;1.21e-09;1!UBERON:0005946;1.21e-09;1!UBERON:0005965;1.21e-09;1!UBERON:0002078;1.21e-09;1!UBERON:0001389;1.76e-09;1!UBERON:0000026;1.76e-09;1!UBERON:0008784;1.76e-09;1!UBERON:0006058;1.76e-09;1!UBERON:0003663;1.76e-09;1!UBERON:0004256;1.76e-09;1!UBERON:0004708;1.76e-09;1!UBERON:0002101;1.76e-09;1!UBERON:0004709;1.76e-09;1!UBERON:0002529;1.76e-09;1!UBERON:0010538;1.76e-09;1!UBERON:0003661;1.76e-09;1!UBERON:0010890;1.76e-09;1!UBERON:0002471;1.76e-09;1!UBERON:0001383;1.76e-09;1!UBERON:0010758;1.76e-09;1!UBERON:0010707;1.76e-09;1!UBERON:0000978;1.76e-09;1!UBERON:0002103;1.76e-09;1!UBERON:0001665;1.76e-09;1!UBERON:0003823;1.76e-09;1!UBERON:0000154;1.76e-09;1!UBERON:0010709;1.76e-09;1!UBERON:0002084;2.45e-09;1!UBERON:0002146;2.45e-09;1!UBERON:0002082;2.45e-09;1!UBERON:0005623;2.45e-09;1!UBERON:0002902;3.53e-09;1!UBERON:0009899;3.53e-09;1!UBERON:0007023;1.64e-08;114!UBERON:0010313;6.52e-08;10!UBERON:0003135;2.05e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.57e-25,3;UBERON:0009751,3.57e-25,3;UBERON:0000946,3.57e-25,3;UBERON:0002523,3.57e-25,3;UBERON:0005983,3.57e-25,3;UBERON:0002165,3.57e-25,3;UBERON:0002062,3.57e-25,3;UBERON:0007280,3.57e-25,3;UBERON:0007023,4.72e-22,114;UBERON:0002133,1.37e-17,2;UBERON:0002021,9.08e-15,5;UBERON:0007100,4.92e-14,27;UBERON:0004151,8.36e-12,3;UBERON:0004797,4.04e-11,7;UBERON:0001301,1.03e-09,1;UBERON:0002134,1.12e-09,1;UBERON:0005208,1.12e-09,1;UBERON:0005946,1.12e-09,1;UBERON:0005965,1.12e-09,1;UBERON:0002078,1.12e-09,1;UBERON:0002135,1.21e-09,1;UBERON:0005418,1.69e-09,1;UBERON:0001389,1.69e-09,1;UBERON:0000026,1.69e-09,1;UBERON:0008784,1.69e-09,1;UBERON:0006058,1.69e-09,1;UBERON:0003663,1.69e-09,1;UBERON:0004256,1.69e-09,1;UBERON:0004708,1.69e-09,1;UBERON:0002101,1.69e-09,1;UBERON:0004709,1.69e-09,1;UBERON:0002529,1.69e-09,1;UBERON:0010538,1.69e-09,1;UBERON:0003661,1.69e-09,1;UBERON:0010890,1.69e-09,1;UBERON:0002471,1.69e-09,1;UBERON:0001383,1.69e-09,1;UBERON:0004357,1.69e-09,1;UBERON:0004347,1.69e-09,1;UBERON:0005420,1.69e-09,1;UBERON:0005732,1.69e-09,1;UBERON:0010758,1.69e-09,1;UBERON:0010707,1.69e-09,1;UBERON:0000978,1.69e-09,1;UBERON:0002103,1.69e-09,1;UBERON:0001665,1.69e-09,1;UBERON:0003823,1.69e-09,1;UBERON:0000154,1.69e-09,1;UBERON:0010709,1.69e-09,1;UBERON:0005733,1.69e-09,1;UBERON:0005730,1.69e-09,1;UBERON:0002146,2.35e-09,1;UBERON:0005623,2.35e-09,1;UBERON:0002084,2.77e-09,1;UBERON:0002082,2.77e-09,1;UBERON:0010226,2.77e-09,1;UBERON:0002902,4.15e-09,1;UBERON:0009899,4.15e-09,1;UBERON:0010313,6.29e-08,10;UBERON:0002342,6.29e-08,10;UBERON:0005062,6.29e-08,10;UBERON:0003135,2.05e-07,11|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,4.45328856692223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000550678,uc001sqq.1_5end | |||
|description=CAGE_peak_1_at_ENST00000550678_5end,CAGE_peak_1_at_uc001sqq.1_5end | |||
|id=chr12:59175485..59175503,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.30e-19;4!UBERON:0007284;5.30e-19;4!UBERON:0010226;2.45e-09;1!UBERON:0006603;4.76e-08;65!UBERON:0009117;6.52e-08;10!UBERON:0005564;6.52e-08;10 | |||
|ontology_enrichment_disease=DOID:114!1.53e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.34e-17;2!DOID:178;2.45e-09;1!DOID:326;2.45e-09;1!DOID:3978;2.45e-09;1!DOID:3394;2.45e-09;1!DOID:5844;2.45e-09;1!DOID:1287;3.91e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.07e-17,2;DOID:178,2.16e-09,1;DOID:326,2.16e-09,1;DOID:3978,2.16e-09,1;DOID:3394,2.16e-09,1;DOID:5844,2.16e-09,1;DOID:1287,3.68e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.95e-55!115;UBERON:0001950!4.56e-14!20;UBERON:0002619!1.14e-12!22;UBERON:0003978!5.93e-12!3;UBERON:0009751!5.93e-12!3;UBERON:0000946!5.93e-12!3;UBERON:0002523!5.93e-12!3;UBERON:0005983!5.93e-12!3;UBERON:0002165!5.93e-12!3;UBERON:0002062!5.93e-12!3;UBERON:0007280!5.93e-12!3;UBERON:0002021!1.40e-11!5;UBERON:0000956!5.59e-11!25;UBERON:0000203!5.59e-11!25;UBERON:0001869!5.58e-10!32;UBERON:0001893!2.78e-09!34;UBERON:0007100!3.29e-09!27;UBERON:0003080!1.16e-08!42;UBERON:0002133!1.28e-08!2;UBERON:0003135!3.99e-08!11;UBERON:0002791!6.08e-08!33;UBERON:0002020!1.16e-07!34;UBERON:0003528!1.16e-07!34;UBERON:0002780!2.25e-07!41;UBERON:0001890!2.25e-07!41;UBERON:0006240!2.25e-07!41 | |||
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|short_description=p1@ENST00000550678,p1@uc001sqq.1 | |||
}} |
Revision as of 23:46, 10 September 2013
Short description: | p1@ENST00000550678, p1@uc001sqq.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000550678_5end, CAGE_peak_1_at_uc001sqq.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550678, uc001sqq.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.07e-17 | 2 |
vascular disease | 2.16e-09 | 1 |
ischemia | 2.16e-09 | 1 |
extrinsic cardiomyopathy | 2.16e-09 | 1 |
myocardial ischemia | 2.16e-09 | 1 |
myocardial infarction | 2.16e-09 | 1 |
cardiovascular system disease | 3.68e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.