FFCP PHASE1:Hg19::chr12:69667739..69667749,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C153|description=CAGE_peak_at_chr12:69667739..69667749,+|id=chr12:69667739..69667749,+|ontology_enrichment_celltype=CL:0000819!1.99e-09!1|ontology_enrichment_celltype_v019=CL:0000182;8.14e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,8.38e-07,12|ontology_enrichment_development_v019=UBERON:0003104;6.52e-10;31!UBERON:0004161;2.55e-07;11|ontology_enrichment_disease=DOID:0060073!1.99e-09!1;DOID:8675!1.99e-09!1;DOID:5662!2.35e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002308!2.11e-14!9;UBERON:0000125!2.11e-14!9;UBERON:0005383!1.87e-11!3;UBERON:0005382!1.87e-11!3;UBERON:0009663!1.01e-10!7;UBERON:0005418!8.68e-10!1;UBERON:0001389!8.68e-10!1;UBERON:0000026!8.68e-10!1;UBERON:0008784!8.68e-10!1;UBERON:0006058!8.68e-10!1;UBERON:0003663!8.68e-10!1;UBERON:0001383!8.68e-10!1;UBERON:0004256!8.68e-10!1;UBERON:0002529!8.68e-10!1;UBERON:0004708!8.68e-10!1;UBERON:0002101!8.68e-10!1;UBERON:0004709!8.68e-10!1;UBERON:0003661!8.68e-10!1;UBERON:0002471!8.68e-10!1;UBERON:0004357!8.68e-10!1;UBERON:0009872!8.68e-10!1;UBERON:0004347!8.68e-10!1;UBERON:0005420!8.68e-10!1;UBERON:0005732!8.68e-10!1;UBERON:0006057!8.68e-10!1;UBERON:0000978!8.68e-10!1;UBERON:0002103!8.68e-10!1;UBERON:0001665!8.68e-10!1;UBERON:0003823!8.68e-10!1;UBERON:0000154!8.68e-10!1;UBERON:0005733!8.68e-10!1;UBERON:0005730!8.68e-10!1;UBERON:0001874!2.55e-09!1;UBERON:0002372!5.28e-09!1;UBERON:0001961!5.28e-09!1;UBERON:0001744!5.28e-09!1;UBERON:0001735!5.28e-09!1;UBERON:0000369!8.21e-09!4;UBERON:0002435!8.21e-09!4;UBERON:0000204!8.21e-09!4;UBERON:0010082!8.21e-09!4;UBERON:0002420!1.88e-08!9;UBERON:0007245!1.88e-08!9;UBERON:0010009!1.88e-08!9;UBERON:0010011!1.88e-08!9;UBERON:0000454!1.88e-08!9;UBERON:0002020!9.38e-08!34;UBERON:0003528!9.38e-08!34|ontology_enrichment_uberon_v019=UBERON:0001389;3.34e-66;1!UBERON:0000026;3.34e-66;1!UBERON:0008784;3.34e-66;1!UBERON:0006058;3.34e-66;1!UBERON:0003663;3.34e-66;1!UBERON:0004256;3.34e-66;1!UBERON:0004708;3.34e-66;1!UBERON:0002101;3.34e-66;1!UBERON:0004709;3.34e-66;1!UBERON:0002529;3.34e-66;1!UBERON:0010538;3.34e-66;1!UBERON:0003661;3.34e-66;1!UBERON:0010890;3.34e-66;1!UBERON:0002471;3.34e-66;1!UBERON:0001383;3.34e-66;1!UBERON:0010758;3.34e-66;1!UBERON:0010707;3.34e-66;1!UBERON:0000978;3.34e-66;1!UBERON:0002103;3.34e-66;1!UBERON:0001665;3.34e-66;1!UBERON:0003823;3.34e-66;1!UBERON:0000154;3.34e-66;1!UBERON:0010709;3.34e-66;1!UBERON:0005090;5.96e-34;2!UBERON:0001630;5.96e-34;2|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.39e-66,1;UBERON:0001389,2.39e-66,1;UBERON:0000026,2.39e-66,1;UBERON:0008784,2.39e-66,1;UBERON:0006058,2.39e-66,1;UBERON:0003663,2.39e-66,1;UBERON:0004256,2.39e-66,1;UBERON:0004708,2.39e-66,1;UBERON:0002101,2.39e-66,1;UBERON:0004709,2.39e-66,1;UBERON:0002529,2.39e-66,1;UBERON:0010538,2.39e-66,1;UBERON:0003661,2.39e-66,1;UBERON:0010890,2.39e-66,1;UBERON:0002471,2.39e-66,1;UBERON:0001383,2.39e-66,1;UBERON:0004357,2.39e-66,1;UBERON:0004347,2.39e-66,1;UBERON:0005420,2.39e-66,1;UBERON:0005732,2.39e-66,1;UBERON:0010758,2.39e-66,1;UBERON:0010707,2.39e-66,1;UBERON:0000978,2.39e-66,1;UBERON:0002103,2.39e-66,1;UBERON:0001665,2.39e-66,1;UBERON:0003823,2.39e-66,1;UBERON:0000154,2.39e-66,1;UBERON:0010709,2.39e-66,1;UBERON:0005733,2.39e-66,1;UBERON:0005730,2.39e-66,1;UBERON:0005090,5.04e-34,2;UBERON:0001630,5.04e-34,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_at_chr12:69667739..69667749,+ | |||
|id=chr12:69667739..69667749,+ | |||
|ontology_enrichment_celltype=CL:0000819!1.99e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.52e-10;31!UBERON:0004161;2.55e-07;11 | |||
|ontology_enrichment_disease=DOID:0060073!1.99e-09!1;DOID:8675!1.99e-09!1;DOID:5662!2.35e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!2.11e-14!9;UBERON:0000125!2.11e-14!9;UBERON:0005383!1.87e-11!3;UBERON:0005382!1.87e-11!3;UBERON:0009663!1.01e-10!7;UBERON:0005418!8.68e-10!1;UBERON:0001389!8.68e-10!1;UBERON:0000026!8.68e-10!1;UBERON:0008784!8.68e-10!1;UBERON:0006058!8.68e-10!1;UBERON:0003663!8.68e-10!1;UBERON:0001383!8.68e-10!1;UBERON:0004256!8.68e-10!1;UBERON:0002529!8.68e-10!1;UBERON:0004708!8.68e-10!1;UBERON:0002101!8.68e-10!1;UBERON:0004709!8.68e-10!1;UBERON:0003661!8.68e-10!1;UBERON:0002471!8.68e-10!1;UBERON:0004357!8.68e-10!1;UBERON:0009872!8.68e-10!1;UBERON:0004347!8.68e-10!1;UBERON:0005420!8.68e-10!1;UBERON:0005732!8.68e-10!1;UBERON:0006057!8.68e-10!1;UBERON:0000978!8.68e-10!1;UBERON:0002103!8.68e-10!1;UBERON:0001665!8.68e-10!1;UBERON:0003823!8.68e-10!1;UBERON:0000154!8.68e-10!1;UBERON:0005733!8.68e-10!1;UBERON:0005730!8.68e-10!1;UBERON:0001874!2.55e-09!1;UBERON:0002372!5.28e-09!1;UBERON:0001961!5.28e-09!1;UBERON:0001744!5.28e-09!1;UBERON:0001735!5.28e-09!1;UBERON:0000369!8.21e-09!4;UBERON:0002435!8.21e-09!4;UBERON:0000204!8.21e-09!4;UBERON:0010082!8.21e-09!4;UBERON:0002420!1.88e-08!9;UBERON:0007245!1.88e-08!9;UBERON:0010009!1.88e-08!9;UBERON:0010011!1.88e-08!9;UBERON:0000454!1.88e-08!9;UBERON:0002020!9.38e-08!34;UBERON:0003528!9.38e-08!34 | |||
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|short_description=p@chr12:69667739..69667749,+ | |||
}} |
Revision as of 00:11, 11 September 2013
Short description: | p@chr12:69667739..69667749, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:69667739..69667749, + |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 2.39e-66 | 1 |
soleus muscle | 2.39e-66 | 1 |
appendage | 2.39e-66 | 1 |
lower limb segment | 2.39e-66 | 1 |
multi-limb segment region | 2.39e-66 | 1 |
hindlimb muscle | 2.39e-66 | 1 |
hindlimb zeugopod muscle | 2.39e-66 | 1 |
paired limb/fin | 2.39e-66 | 1 |
limb | 2.39e-66 | 1 |
pelvic appendage | 2.39e-66 | 1 |
limb segment | 2.39e-66 | 1 |
paired limb/fin segment | 2.39e-66 | 1 |
limb muscle | 2.39e-66 | 1 |
pelvic complex muscle | 2.39e-66 | 1 |
zeugopod | 2.39e-66 | 1 |
muscle of leg | 2.39e-66 | 1 |
paired limb/fin bud | 2.39e-66 | 1 |
limb bud | 2.39e-66 | 1 |
pelvic appendage bud | 2.39e-66 | 1 |
limb/fin field | 2.39e-66 | 1 |
subdivision of organism along appendicular axis | 2.39e-66 | 1 |
appendage girdle complex | 2.39e-66 | 1 |
leg | 2.39e-66 | 1 |
hindlimb | 2.39e-66 | 1 |
triceps surae | 2.39e-66 | 1 |
hindlimb zeugopod | 2.39e-66 | 1 |
posterior region of body | 2.39e-66 | 1 |
pelvic complex | 2.39e-66 | 1 |
limb field | 2.39e-66 | 1 |
hindlimb/pelvic fin field | 2.39e-66 | 1 |
muscle structure | 5.04e-34 | 2 |
muscle organ | 5.04e-34 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.