FFCP PHASE1:Hg19::chr12:125052112..125052172,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7673 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000542565_5end | |||
|description=CAGE_peak_2_at_NCOR2_5end | |||
|id=chr12:125052112..125052172,- | |||
|ontology_enrichment_celltype=CL:0002194!2.30e-07!63;CL:0000576!2.30e-07!63;CL:0000040!2.30e-07!63;CL:0000559!2.30e-07!63;CL:0000557!5.07e-07!71;CL:0002009!9.27e-07!65 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.39e-07,59;CL:0000576,4.39e-07,59;CL:0000040,4.39e-07,59;CL:0000559,4.39e-07,59;CL:0000557,9.81e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!4.40e-13!612;UBERON:0007023!1.35e-11!115;UBERON:0002050!2.41e-11!605;UBERON:0005423!2.41e-11!605;UBERON:0000923!4.83e-11!604;UBERON:0005291!4.83e-11!604;UBERON:0006598!4.83e-11!604;UBERON:0002532!4.83e-11!604;UBERON:0000468!1.86e-10!659;UBERON:0002346!1.06e-09!90;UBERON:0000480!1.29e-09!626;UBERON:0000467!1.40e-09!625;UBERON:0003075!1.70e-09!86;UBERON:0007284!1.70e-09!86;UBERON:0000073!3.14e-09!94;UBERON:0001016!3.14e-09!94;UBERON:0001049!8.27e-09!57;UBERON:0005068!8.27e-09!57;UBERON:0006241!8.27e-09!57;UBERON:0007135!8.27e-09!57;UBERON:0005743!8.88e-09!86;UBERON:0000062!9.17e-09!511;UBERON:0001017!9.98e-09!82;UBERON:0000955!5.89e-08!69;UBERON:0006238!5.89e-08!69;UBERON:0002616!9.61e-08!59;UBERON:0000924!3.57e-07!173;UBERON:0006601!3.57e-07!173;UBERON:0003076!5.18e-07!15;UBERON:0003057!5.18e-07!15;UBERON:0004121!6.14e-07!169;UBERON:0000025!8.86e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.14e-12,592;UBERON:0007023,2.63e-11,114;UBERON:0000923,1.88e-10,560;UBERON:0010316,1.88e-10,560;UBERON:0005291,1.88e-10,560;UBERON:0006598,1.88e-10,560;UBERON:0010317,1.88e-10,560;UBERON:0002532,1.88e-10,560;UBERON:0002050,5.13e-10,564;UBERON:0002346,7.25e-10,86;UBERON:0005423,7.64e-10,581;UBERON:0003075,1.15e-09,82;UBERON:0007284,1.15e-09,82;UBERON:0001016,9.27e-09,89;UBERON:0001049,2.43e-08,56;UBERON:0005068,2.43e-08,56;UBERON:0006241,2.43e-08,56;UBERON:0007135,2.43e-08,56;UBERON:0001017,2.58e-08,81;UBERON:0000955,1.54e-07,68;UBERON:0006238,1.54e-07,68;UBERON:0000073,2.46e-07,53;UBERON:0002616,2.46e-07,53;UBERON:0010371,2.65e-07,104;UBERON:0003076,5.18e-07,15;UBERON:0003057,5.18e-07,15;UBERON:0004121,7.77e-07,171;UBERON:0000924,7.77e-07,171;UBERON:0006601,7.77e-07,171 | |||
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| |||
|short_description=p2@NCOR2 | |||
}} |
Revision as of 21:35, 10 September 2013
Short description: | p2@NCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NCOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542565_5end |
EntrezGene: | NCOR2 |
HGNC: | 7673 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.39e-07 | 59 |
monocyte | 4.39e-07 | 59 |
monoblast | 4.39e-07 | 59 |
promonocyte | 4.39e-07 | 59 |
granulocyte monocyte progenitor cell | 9.81e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
embryo | 4.14e-12 | 592 |
adult organism | 2.63e-11 | 114 |
germ layer | 1.88e-10 | 560 |
germ layer / neural crest | 1.88e-10 | 560 |
embryonic tissue | 1.88e-10 | 560 |
presumptive structure | 1.88e-10 | 560 |
germ layer / neural crest derived structure | 1.88e-10 | 560 |
epiblast (generic) | 1.88e-10 | 560 |
embryonic structure | 5.13e-10 | 564 |
neurectoderm | 7.25e-10 | 86 |
developing anatomical structure | 7.64e-10 | 581 |
neural plate | 1.15e-09 | 82 |
presumptive neural plate | 1.15e-09 | 82 |
nervous system | 9.27e-09 | 89 |
neural tube | 2.43e-08 | 56 |
neural rod | 2.43e-08 | 56 |
future spinal cord | 2.43e-08 | 56 |
neural keel | 2.43e-08 | 56 |
central nervous system | 2.58e-08 | 81 |
brain | 1.54e-07 | 68 |
future brain | 1.54e-07 | 68 |
regional part of nervous system | 2.46e-07 | 53 |
regional part of brain | 2.46e-07 | 53 |
ecto-epithelium | 2.65e-07 | 104 |
posterior neural tube | 5.18e-07 | 15 |
chordal neural plate | 5.18e-07 | 15 |
ectoderm-derived structure | 7.77e-07 | 171 |
ectoderm | 7.77e-07 | 171 |
presumptive ectoderm | 7.77e-07 | 171 |
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