FFCP PHASE1:Hg19::chr19:19217081..19217110,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C45|description=CAGE_peak_at_chr19:19217081..19217110,+|id=chr19:19217081..19217110,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;1.19e-17;7!CL:0000586;1.19e-17;7!CL:0002322;4.99e-14;5!CL:0002574;1.17e-08;1|ontology_enrichment_celltype_v019_2=CL:0000039,8.66e-18,7;CL:0000586,8.66e-18,7;CL:0002322,5.23e-14,5;CL:0002574,6.16e-09,1|ontology_enrichment_development_v019=UBERON:0009117;9.25e-19;10!UBERON:0005564;9.25e-19;10!UBERON:0000358;5.07e-09;1|ontology_enrichment_disease=DOID:2394!9.08e-13!14|ontology_enrichment_disease_v019=DOID:193;9.84e-09;29!DOID:2394;1.19e-08;14|ontology_enrichment_disease_v019_2=DOID:193,9.86e-09,29;DOID:2394,1.10e-08,14|ontology_enrichment_uberon=UBERON:0000991!1.58e-11!21;UBERON:0009196!1.58e-11!21;UBERON:0009117!1.58e-11!21;UBERON:0005564!1.58e-11!21;UBERON:0004176!9.97e-11!22;UBERON:0000992!5.32e-10!13;UBERON:0005156!3.15e-09!59;UBERON:0000990!3.15e-09!59;UBERON:0003133!3.63e-09!48;UBERON:0003886!1.33e-07!63|ontology_enrichment_uberon_v019=UBERON:0000991;8.93e-17;21!UBERON:0000473;1.80e-15;8!UBERON:0003135;2.68e-11;11!UBERON:0003133;2.78e-09;44!UBERON:0006834;1.17e-08;1!UBERON:0003101;1.98e-08;22!UBERON:0000079;1.98e-08;22!UBERON:0002323;5.91e-07;45|ontology_enrichment_uberon_v019_2=UBERON:0000991,7.57e-17,21;UBERON:0009196,7.57e-17,21;UBERON:0009117,7.57e-17,21;UBERON:0005564,7.57e-17,21;UBERON:0004176,4.79e-16,22;UBERON:0000473,1.37e-15,8;UBERON:0003886,3.48e-12,54;UBERON:0003135,2.20e-11,11;UBERON:0003133,3.29e-11,48;UBERON:0005156,5.61e-11,59;UBERON:0000990,5.61e-11,59;UBERON:0002553,1.34e-10,61;UBERON:0002323,2.05e-09,46;UBERON:0004458,9.04e-09,49;UBERON:0006834,1.65e-08,1;UBERON:0003101,1.66e-08,22;UBERON:0000079,1.66e-08,22|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.990130823680373,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.434539556882471,0,0,0,0,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0,0.619954687054593,0,0.247266929278557,0,0,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,1.09776335516636,0.795178609928912,3.36962434321603,1.86589899027667,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,5.42621605391443,0.823240336780769,0,0.355391948742546,0,0.904318131178758,0.871533458600294,1.09970290300263,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,1.91143951829782,0.587403472388222,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.328508624055237,1.55776328755086,0,0,0,0,0.114814448164607,0,1.57349297951309,0.451199612907412,0.539107359730903,0,0,0.316654886678627,0,0,0,1.54227252690289,1.08378575017541,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0.966782203814463,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0,0,0,3.71876439437829,3.46293581513704,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0.762520775695299,0.511795582622668,0.855877976067841,0,0,0.719489830333259,0.54907405947211,0.471249609382746,0,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,1.73632660280006,0,0,0,0.281695602532241,0.717056761020258,0.196498082026242,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.7249995754347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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr19:19217081..19217110,+ | |||
|id=chr19:19217081..19217110,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.19e-17;7!CL:0000586;1.19e-17;7!CL:0002322;4.99e-14;5!CL:0002574;1.17e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.66e-18,7;CL:0000586,8.66e-18,7;CL:0002322,5.23e-14,5;CL:0002574,6.16e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.25e-19;10!UBERON:0005564;9.25e-19;10!UBERON:0000358;5.07e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!9.08e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:193;9.84e-09;29!DOID:2394;1.19e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:193,9.86e-09,29;DOID:2394,1.10e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000991!1.58e-11!21;UBERON:0009196!1.58e-11!21;UBERON:0009117!1.58e-11!21;UBERON:0005564!1.58e-11!21;UBERON:0004176!9.97e-11!22;UBERON:0000992!5.32e-10!13;UBERON:0005156!3.15e-09!59;UBERON:0000990!3.15e-09!59;UBERON:0003133!3.63e-09!48;UBERON:0003886!1.33e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;8.93e-17;21!UBERON:0000473;1.80e-15;8!UBERON:0003135;2.68e-11;11!UBERON:0003133;2.78e-09;44!UBERON:0006834;1.17e-08;1!UBERON:0003101;1.98e-08;22!UBERON:0000079;1.98e-08;22!UBERON:0002323;5.91e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,7.57e-17,21;UBERON:0009196,7.57e-17,21;UBERON:0009117,7.57e-17,21;UBERON:0005564,7.57e-17,21;UBERON:0004176,4.79e-16,22;UBERON:0000473,1.37e-15,8;UBERON:0003886,3.48e-12,54;UBERON:0003135,2.20e-11,11;UBERON:0003133,3.29e-11,48;UBERON:0005156,5.61e-11,59;UBERON:0000990,5.61e-11,59;UBERON:0002553,1.34e-10,61;UBERON:0002323,2.05e-09,46;UBERON:0004458,9.04e-09,49;UBERON:0006834,1.65e-08,1;UBERON:0003101,1.66e-08,22;UBERON:0000079,1.66e-08,22 | |||
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| |||
|short_description=p@chr19:19217081..19217110,+ | |||
}} |
Revision as of 19:34, 11 September 2013
Short description: | p@chr19:19217081..19217110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:19217081..19217110, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.66e-18 | 7 |
germ cell | 8.66e-18 | 7 |
embryonic stem cell | 5.23e-14 | 5 |
stromal cell of pancreas | 6.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
gonad | 7.57e-17 | 21 |
indifferent external genitalia | 7.57e-17 | 21 |
indifferent gonad | 7.57e-17 | 21 |
gonad primordium | 7.57e-17 | 21 |
external genitalia | 4.79e-16 | 22 |
testis | 1.37e-15 | 8 |
body cavity precursor | 3.48e-12 | 54 |
male reproductive organ | 2.20e-11 | 11 |
reproductive organ | 3.29e-11 | 48 |
reproductive structure | 5.61e-11 | 59 |
reproductive system | 5.61e-11 | 59 |
anatomical cavity | 1.34e-10 | 61 |
body cavity | 2.05e-09 | 46 |
body cavity or lining | 9.04e-09 | 49 |
uterus or analog | 1.65e-08 | 1 |
male organism | 1.66e-08 | 22 |
male reproductive system | 1.66e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 9.86e-09 | 29 |
ovarian cancer | 1.10e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.